A complex biological structure with many interacting parts might appear, at first glance, as if it were originally created in its present form with all its interlocking components fully formed and intact. It doesn’t seem possible that they developed step by step via biological evolution. In Darwin’s Black Box, Michael Behe introduces a term that he and other proponents of Intelligent Design use for this concept: irreducible complexity.

In this paper, MIT professor Ian Hutchinson addresses the question of how to engage arguments put forward by the New Atheists. In doing so, he offers a critique of scientism, the assumption that scientific knowledge is all the real knowledge there is.

Some people see science and religion as enemies, at war for leadership in our modern culture. Others see science and religion as completely separate and unrelated facets of life. However, science is not the only source of facts, and religion reaches beyond the realm of values and morals. In fact, religion can have a positive impact on science, such as in the development of modern medical ethics. Many early scientific leaders were devout Christians, as are some scientific leaders today. Science can also enhance the spiritual life of believers. Christians rejoice in scientific discoveries that reveal the glory of God the creator. (Updated June 27, 2012)

We at BioLogos believe that God used the process of evolution to create all the life on earth today. While we accept the science of evolution, we emphatically reject evolutionism. Evolutionism is the atheistic worldview that says life developed without God and without purpose. Instead, we agree with Christians who adhere to Intelligent Design and Creationism that the God of the Bible created the universe and all life. Christians disagree, however, on how God created. Young Earth Creationists believe that God created just 6,000 to 10,000 years ago and disagree with much of mainstream science. Supporters of Intelligent Design accept more of evolutionary science, but argue that some features of life are best explained by direct intervention by an intelligent agent rather than by God's regular way of working through natural processes. We at BioLogos agree with the modern scientific consensus on the age of the earth and evolutionary development of all species, seeing these as descriptions of how God created. The term BioLogos comes from the Greek words bios (life) and logos (word), referring to the opening of the Gospel of John. “In the beginning was the Word, and the Word was with God, and the Word was God. He was with God in the beginning. Through him all things were made.” (Updated on March 1, 2012)

In this article, Venema offers his review of Stephen Meyer's book Signature in the Cell.

This article provides an overview of genomics evidence for common ancestry and hominid population sizes, and briefly discusses the implications of these lines of evidence for scientific concordist approaches to the Genesis narratives.

In this paper, Venema tells the story of his transition from support of Intelligent Design to the view that God uses evolution as a creative mechanism.

NASA astronomer Jennifer Wiseman asserts that studying creation can show us the nature of God; science can inform us of what we need to do as stewards of God’s creation; understanding the natural world gives us a deeper knowledge of Jesus Christ; and science can give us a better understanding of ourselves. This essay was presented at the November 2009 Theology of Celebration Workshop.

Science and religion scholar Michael Ruse gives a personal account of his experiences as an author and public speaker on the compatibility of Christianity and biological evolution.

Can science provide substantive insight into the question of God’s existence? Isaac's paper examines three schools of thought regarding the possibility of detecting God’s existence through science: Evolutionism, Creationism, and Intelligent Design.

Giberson's essay makes the case that scientific fundamentalists are not merely arguing for the supremacy of science but also presenting science as a quasi-religious replacement. The agenda of the "New Atheists" is not merely to refute mainstream religion but to replace it. Unfortunately, the scientific community is poorly represented by these aggressive public figures.

Geologists Davidson and Wolgemuth address the widely promulgated notion that the Flood can account for the earth’s complex geology, and that all genuine Christians should accept this viewpoint.

In this paper, Baylor philosophy professor Francis Beckwith distinguishes between Intelligent Design (ID) and Thomistic Design (TD).

In this paper, adapted from an article from Science & Christian Belief, Dr. Oliver R. Barclay compares and contrasts the biblical view of design in nature with modern design arguments.

Every field of science has unanswered questions and gaps in our understanding. Scientists typically view these as open research questions. Others sometimes argue that if science can’t explain how something happened, then God must be the explanation. Such arguments are called “god-of-the-gaps” arguments. The risk in these arguments is that science is always developing. If gaps in scientific knowledge are the basis for belief in God, then as scientists fill in the gaps, the evidence for God disappears. The God of the Bible, however, is much more than a god of the gaps. Christians believe that God is always at work in the natural world, in the gaps as well as in the areas that science can explain.

Scientists have found multiple lines of evidence for evolution, not just one or two. These types of evidence are independent of each other, coming from sources as different as ancient fossils and modern genetics labs. Evidence also comes from comparing the anatomy of creatures living today. All creatures with four limbs (whether mammals, birds, or reptiles) have the same bone structure in each limb, pointing to their descent from a common ancestor. More evidence comes from biogeography. Isolated islands are missing common species found on the mainland, but are filled with many unique species that can be related by a common ancestor. Finally, evidence comes from embryonic development. As an embryo of a mammal grows, its heart develops through stages similar to fish, amphibians, and reptiles. God’s creation declares the history of life in many different ways. All these ways are pointing to a consistent picture of God creating through evolution.

In recent decades, scientists have discovered more about the beginnings of humanity. The fossil record shows a gradual transition over 5 million years ago from chimpanzee-size creatures to hominids with larger brains who walked on two legs. Later hominids used fire and stone tools and had brains as large as modern humans. Fossils of homo sapiens in east Africa date back nearly 200,000 years. Humans developed hearths for fire, stone points for spears and arrows, and cave paintings by 30,000 years ago. By 10,000 years ago, humans had spread throughout the globe. Genetic studies support the same picture. Humans share more DNA with chimpanzees than with any other animal, suggesting that humans and chimps share a relatively recent common ancestor. Also, the same defective genes appear in both humans and chimps, at the same locations in the genome—an observation difficult to explain except by common ancestry. Genetics also tells us that the human population today descended from more than two people. Evolution happens not to individuals but to populations, and the amount of genetic diversity in the gene pool today suggests that the human population was never smaller than several thousand individuals. Yet all humans, of all races, are descended from this group. Humanity is one family.

Darwin developed his theory of evolution by looking at scientific evidence available in the mid-1800s. Since then, the whole field of genetics has developed, adding a powerful independent line of evidence in support of evolution. Genes show how the physical traits of living things are handed down and modified from one generation to the next. By comparing the DNA of many organisms, scientists can map the relationships between species. This map is in remarkable agreement with Darwin’s predictions. The structure of chromosomes and particular genetic sequences point to the conclusion not just of common design, but common descent as well.

In this paper, Venema explores several examples in biology where random mutation and natural selection have indeed led to substantial increases in biological information. The question of how new specified information arises in DNA, far from being an “enigma”, is one of great interest to biologists.

Mathematics professor James Bradley looks at the design argument presented in William Dembski's book The Design Inference and offers his criticisms on the accuracy of the model.