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        <title>Custom Feed &#45; The BioLogos Forum</title>
    <link>http://biologos.org/resources/find/any/Problem of Evil,Science Teachers/sort&#45;by&#45;Newest?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
    <description>This is a custom feed of BioLogos resources. Make a new feed at http://biologos.org/resources/find</description>
    <dc:language>en</dc:language>
    <dc:rights>Copyright 2013</dc:rights>
    <dc:date>2013-05-19T04:35:02-08:00</dc:date>    
    
    

            
            
        
      <item>
        <title>Series: Understanding Randomness</title>
        <link>http://biologos.org/blog/series/immunity&#45;and&#45;evolution&#45;the&#45;same&#45;story?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/immunity&#45;and&#45;evolution&#45;the&#45;same&#45;story?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this series, Kathryn Applegate addresses the concern that randomness implies the absence of God&apos;s activity and involvement in the natural world.  She begins by clearing up some common misconceptions about the concept of &quot;randomness&quot;, and later focuses on the mechanisms of the immune system to demonstrate that God works through random processes to preserve life.  Far from being an indication of a &quot;godless&quot; universe, one might conclude that randomness is one of God’s favorite mechanisms for creating and sustaining life!</description>
        <content:encoded><![CDATA[<p>You hear it all the time: “That’s so random!” When used by people of my generation, the word “random” can simply mean “cool” or “surprising.” Or it can mean something like “disconnected,” as in the phrase, “I had a random thought” (which returns 189,000 hits on Google, by the way—random!).</p>

<p>Despite this usage, most of us know that randomness has something to do with probability, and that it often implies a lack of conscious intentionality. But what do mathematicians and scientists mean when they say something is random? Can a random process lead to an ordered, even predictable outcome? Is there evidence that God makes use of random processes to fulfill his creative purposes?</p>

<p>These are big questions, and we won’t address them all today. But I think randomness is an important topic to cover for two reasons: 1) it is integral to many processes in biology (and math, physics, chemistry, etc.), and 2) it is commonly misunderstood to be incompatible with Christianity.</p>

<p>As I said above, most of us know that randomness has something to do with probability. If you pick a card “at random” from a shuffled deck, you have a small probability of drawing an ace (4 out of 52, or a 7.7% chance). If you flip a coin, you have an equal probability of getting heads or tails.</p>

<p>Randomness also seems to imply a lack of intentionality or purposefulness. After all, you might hope for an ace when you draw a card, but you can’t choose one on purpose. You might call heads when you flip a coin, but you can’t know beforehand what the outcome will be. Thus the outcome is <em>indeterminate</em>, but is it purposeless? Not necessarily. Indeterminacy simply means the result cannot be predicted from the outset.</p>

<p>It should be noted that indeterminacy does not imply that God does not have foreknowledge of future events. Christians ought not to be uncomfortable with the idea of God interacting with his creation through chance. We often describe a seemingly-random (i.e. unplanned by us) sequence of events as being “providential,” or planned by God.</p>

<p>In biology, it is very hard or impossible to calculate precise probabilities for most processes, so when we say a process is random, we typically mean it is extremely unpredictable. Eventually we will discuss randomness within biological evolution, but first we must consider some simpler processes, like the self-assembly of a virus.</p>

<p>Viruses are remarkably efficient entities. Coiled tightly within a protein-based shell is a small amount of DNA needed for self-replication. The shell, called a capsid, is made of many repeating protein subunits and is therefore highly symmetrical (see figure). Important biomedical insights have certainly been gleaned from structural studies of viruses, but viruses also teach us about the emergence of order from non-order.</p>

<p>The virus life cycle has four main steps: 1) enter a host cell, 2) hijack the cell’s replication and translation machinery to make many copies of itself, 3) assemble into many virus particles, and 4) exit the cell to invade another host.</p>

<p>When I first learned about this process, I found it very hard to believe it just “happens.” The idea that a bunch of molecules bumping into each other inside a crowded cell could spontaneously assembly into a fully-functional virus seemed a bit far-fetched. Many viral capsids have over 100 protein subunits that must interact with each other in just the right way, or it won’t work. Surely there must be something driving this process, right?</p>

<p>There is! Random motion. I had to see it to believe it. I distinctly remember sitting in class during my first year of graduate school when the professor demonstrated self-assembly of a virus using a 3D <a href="http://models.scripps.edu/" target="_blank">model</a> as shown in the following video. In less than 30 seconds, you can watch a jumbled heap of proteins become a beautifully ordered structure.</p>

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<p>As the narrator explains, sub-assemblies form and break apart en route to the most stable structure, the full capsid. As the sub-assemblies begin to form, further associations with free subunits become more favorable and as a result occur rapidly, while the final steps may take considerably longer. While the subunits in the model are rigid, in reality the proteins take on multiple conformations, allowing the capsid to “breathe.”</p>

<p>Amazing as it is, the system we just considered—one virus capsid in a jar—is pretty simple. One wonders how self-assembly can happen in a crowded cell, where there are countless other molecules diffusing around, potentially getting in the way. We can’t directly <em>see</em> how it happens in a cell, but we can reconstitute the process in a test tube using different combinations of constituent molecules.</p>

<p>Consider two viruses, where each protein subunit in one virus is the mirror image of the corresponding subunit in the other. Putting the two viruses together by hand would be pretty tricky, because the constituent parts look so similar. But random motion can do the job in short order:</p>

<p align="center"><object height="385" width="480"><param name="movie" value="http://www.youtube.com/v/YbpTusoDEgA&amp;hl=en_US&amp;fs=1&amp;rel=0" /><param name="allowFullScreen" value="true" /><param name="allowscriptaccess" value="always" /><embed allowfullscreen="true" allowscriptaccess="always" height="385" src="http://www.youtube.com/v/YbpTusoDEgA&amp;hl=en_US&amp;fs=1&amp;rel=0" type="application/x-shockwave-flash" width="480"></embed></object></p>

<p>From this model, we can see clearly, in real-time, how distinct complex structures can arise from their parts randomly interacting with one another. Many large viruses also use special scaffolding proteins to assist in the assembly process, and some even use their own genomes as a scaffold. In addition, two closely-related viruses that happen to infect the same cell can exchange parts to create a new virus. This is one way viruses can evolve quickly to evade the host’s immune system.</p>

<p>Here we have seen how viruses demonstrate a principle inherent in God’s world—that order can emerge out of chaos from random processes. In my next post, we will look at some other biological processes that make use of—rather, depend on—randomness. This will set the stage for us to see that such processes can not only assemble a structure within seconds or minutes, but also generate complex, information-bearing molecules over billions of years. Even though the freedom inherent in nature sometimes produces <em>un</em>intelligently-designed structures (like viruses, which can kill us), we see that God has made, and continues to oversee by his providence, a <em>good</em> creation that, at least in part, is capable of creating itself.</p>

<p class="intro">Next weekend, we’ll continue this series about randomness and God’s divine will. Up next: how God created the body to heal itself, and how can random mutations can be both harmful and benign.</p>]]></content:encoded>
        <pubDate>Sat, 23 Mar 13 06:00:44 -0700</pubDate>
        <dc:creator>Kathryn Applegate</dc:creator>
        <!--<dc:date>Mar 23, 2013 06:00</dc:date>-->
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        <title>Where are the Transitional Fossils?</title>
        <link>http://biologos.org/blog/where&#45;are&#45;the&#45;transitional&#45;fossils?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/where&#45;are&#45;the&#45;transitional&#45;fossils?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>A common argument leveled against the theory of evolution is that scientists have not been able to produce transitional fossils that show the change of one species into another.  In this podcast, we address a common misconception about what transitional fossils actually are.</description>
        <content:encoded><![CDATA[<p align="center"><iframe src="http://player.vimeo.com/video/31875051?title=0&amp;byline=0&amp;portrait=0" width="570" height="428" frameborder="0" webkitAllowFullScreen allowFullScreen></iframe></p>

<p>A common argument leveled against the theory of evolution is that scientists have not been able to produce the expected transitional fossils that show the change of one species into another. If evolution were true, wouldn’t there be instances of clear intermediary species, like, for example, a species that was half whale and half hippo to show the transition between those two? In this BioLogos podcast, Kelsey Luoma addresses this misconception about what a transitional fossil actually is. Rather than a mix between two related species, transitional fossils point back to the common ancestors that modern species share. The fact is that the number of transitional species is massive and it grows with each passing year.  Given the rarity with which organisms are actually fossilized, the amazing thing is actually the completeness of the fossil record, not its incompleteness.  The transitional species story strongly supports, and certainly does not disprove, evolutionary theory. <sup>1</sup></p>

<p class="date">1. To hear the full audio clips which have been referenced go to:</p>
<ul><li><a href="http://www.youtube.com/watch?v=X6EmOQLf25s&feature=BFa&list=PLACF41F3DDBCA4565&lf=results_video&noredirect=1" target="_blank">Rational Response Debate with Kirk Cameron (from Way of the Masters)</a></li>
<li><a href="http://www.youtube.com/watch?v=FN9wyn9xVko&feature=related" target="_blank">Behind the Scenes with Dr. Neil Shubin (from Cincinnati Museum Center)</a></li>
<li><a href="http://www.youtube.com/watch?v=fVNXXLLUYFM' target="_blank">Mark Norell Publishes New Archaeopteryx Findings (from American Museum of Natural Sciences)</a></li>
<li><a href="http://www.youtube.com/watch?v=VmtDGjfMajM" target="_blank">Texas A&M Professor Discusses Findings of Autralopithecus Sediba and its Relationship to Humans (from Texas A&M University)</a></li>
<li>Intro/outro music composed by Martin Minor (<a href="http://www.looperman.com/users/profile/159051" target="_blank">Minor2Go</a>).</li> </ul> </p>

<p><strong>An audio only version of the podcast can be downloaded <a href="http://biologos.org/uploads/resources/fossil_podcast_final.mp3" target="_blank">here</a>.</strong></p>
]]></content:encoded>
        <pubDate>Fri, 01 Feb 13 08:57:28 -0800</pubDate>
        <dc:creator>Kelsey Luoma</dc:creator>
        <!--<dc:date>Feb 01, 2013 08:57</dc:date>-->
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        <title>Worshiping, Growing, and Learning</title>
        <link>http://biologos.org/blog/worshiping&#45;growing&#45;and&#45;learning?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/worshiping&#45;growing&#45;and&#45;learning?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Yesterday, biology professors Randy Moore and Sehoya Cotner raised the concern that workshops focused on evolution&#45;related training do not reach not reach creationism&#45;based biology teachers. Today, we&apos;d like to focus on BioLogos&apos; efforts to address that divide through our Biology by the Sea workshops.</description>
        <content:encoded><![CDATA[<p>Our third annual BioLogy by the Sea teachers’ workshop was another success. Middle and high school teachers from Christian schools came from all over the United States to take part in this weeklong workshop. Last year’s group continued studying biodiversity, while this year’s group studied developmental biology.</p>

<p>Showing Christian schoolteachers that one can be a believer who embraces the Bible as God’s inspired Word and evolution as His creative process has always been a mission of BioLogy by the Sea, the accomplishment of which is never guaranteed. During the first few days, several participants expressed doubt that their faith could be compatible with evolutionary creation. However, as the week came to a close, some of those who had previously denied compatibility seemed to be much more considerate of the notion—if not fully accepting of the idea altogether. If you’ve ever doubted evolution yourself, then you know that such acceptance is no small feat. There are numerous theological and philosophical barriers that must be dealt with, and to think that this could occur in the span of just one week is pretty amazing. Then again, the program had some pretty amazing guest speakers and activities—the most significant of which occurred throughout the week: prayer and worship to the One we all serve, our Lord and Savior Jesus Christ.</p>

<p>While these times served to glorify God and nurture participants’ souls, the week was also filled with activities designed to nurture participants’ minds through the study of biblical passages and biological content. In addition to graduate level courses and accompanying labs in either biodiversity or developmental biology, participants went on field trips to the intertidal zone, the Natural History Museum of Los Angeles County, the La Brea Tar Pits, and the Gaslamp Quarter. Furthermore, presentations given by Dr. Gregg Davidson, professor of geology and geological engineering from the University of Mississippi, and Dr. Mary Schweitzer, paleontologist and associate professor of marine, earth and atmospheric sciences from North Carolina State University, offered key insights into their fields and demonstrated how the tenants of both are based on evidence rather than conjecture.</p>

<p>In short, this year’s BioLogy by the Sea offered another comprehensive look at what it means to be a Christian who accepts the conclusions of mainstream science—not at the expense of our faith in God or His Word, but in light of it. We can only hope that these teachers, who spent an entire week of their summer break with us, left with not only a greater sense of oneness as the body of Christ, but also found new ways to engage their students in matters of science and faith—another facet of the program’s mission. After all, the first step in protecting the next generation from the faith crisis that many seem to experience after they learn about evolution from a secular perspective is showing that it need not be an either-or situation. It’s also an important part of ensuring that Christian young people can rise to the forefront of global scientific research.</p>

<p class="caption-center"><iframe src="http://player.vimeo.com/video/46269101" width="500" height="281" frameborder="0" webkitAllowFullScreen mozallowfullscreen allowFullScreen></iframe></p>]]></content:encoded>
        <pubDate>Wed, 23 Jan 13 07:00:17 -0800</pubDate>
        <dc:creator></dc:creator>
        <!--<dc:date>Jan 23, 2013 07:00</dc:date>-->
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        <title>Evolution and Creationism in America’s Biology Classrooms</title>
        <link>http://biologos.org/blog/teaching&#45;evolution&#45;and&#45;creationism&#45;in&#45;americas&#45;biology&#45;classrooms?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/teaching&#45;evolution&#45;and&#45;creationism&#45;in&#45;americas&#45;biology&#45;classrooms?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>High school biology courses have a strong and lingering impact on students’ views of evolution and creationism.</description>
        <content:encoded><![CDATA[<p>Although the evolution-creationism controversy has been one of the most abiding controversies in America during the past several decades, public attitudes about evolution and creationism have changed relatively little during that time. Indeed, since 1982, Gallup has consistently reported that 40-47% of Americans endorse young-Earth creationism, 35-40% believe that humans evolved but that God guided that process, and 9-16% believe that humans evolved but that God had no role in the process (Gallup, 2011). Similarly, a Harris Poll reported, “many more people believe in miracles, angels, hell and the devil than in Darwin’s theory of evolution” (Harris Poll, 2009).</p>

<p>These facts persist in the face of educational guidelines in most states that mandate the teaching of evolution, court decisions that have declared the teaching of creationism as unconstitutional and having “no scientific merit or educational value as science [because it] is simply not science” (<em>McLean v. Arkansas Board of Education</em>, 1982), thousands of scientific papers and books that document evidence for evolution, direct observations of evolution, and countless endorsements of evolution (and rejections of creationism) by professional scientific organizations. Decades of costly science education reform have not reformed popular acceptance of evolution: most of the public continues to see religion and mainstream science as diametrically opposed, and when presented with that choice, most will choose the supernatural over science, even when it means rejecting the foundations of modern biology. Why?</p>

<p>Many factors – for example, the media and religion -- influence people’s beliefs about the evolution and creationism, as well as their acceptance of science. One of these influences is education. What are students taught about evolution and creationism?</p>


<h3>Evolution and Creationism in High School Biology Courses</h3>
<p>Students have widely variable introductions to evolution in their high school biology courses. Although most states have educational guidelines that mandate the teaching of evolution, only about 70% of students entering college report that their high school biology courses included evolution (in some form) and not creationism. Although educational guidelines provide important support for teachers wanting to teach evolution, these guidelines are irrelevant to many biology teachers and administrators. </p>

<div class="see-also">For a detailed account of how skeptical Christian college students navigate the many social and religious concerns to reconcile their faith with evolutionary creation, see <a href="http://biologos.org/blog/series/evolution-and-personal-faith-christian-university-students">Mark Winslow’s series</a>.</div>

<p>Approximately 20% of students are taught neither creationism nor evolution in their high school biology courses (Moore, 2007). Another “cautious 60%” of biology teachers want to avoid controversy, and neither advocate evolution nor explicitly endorse nonscientific alternatives (Berkman and Plutzer, 2011). Even when teachers do teach evolution, they often cover the topic in a trivial or disparaging way (Bandoli, 2008, and references therein), thereby perpetuating a cycle of ignorance reinforced by popular opinion (Berkman and Plutzer, 2011). When these students arrive on college campuses, they are predisposed to remain skeptical of evolution, for their perceptions and prior knowledge strongly influence their learning.  This is especially important for evolution, for many students view evolution as negative and undesirable (Brem, Ranney, and Schindel, 2003) and sense an “overlap of some ideas that the theory [of evolution] advocates with other social, epistemological, and religious beliefs” (Hakoyem and BouJaode, 2008).</p>


<h3>The Creationists Down the Hall</h3>
<p>Most Americans reject evolution, and most biologists have grown accustomed to headlines such as “Four in 10 Americans Believe in Strict Creationism” (Gallup, 2010) and “In U.S., 46% Hold Creationist View of Human Origins” (Gallup, 2012). However, most biologists are less familiar with the fact that creationism is thriving among undergraduate biology majors (Verhey, 2005; also see above), biology graduate students (Gregory and Ellis, 2009), and former students who have become biology teachers (Berkman, Pacheco, and Plutzer, 2008; Moore, 2007, and references therein).</p> 

<p>Despite their training, many biology teachers are creationists. Indeed, fully one-sixth of biology teachers are young-Earth creationists (Berkman, Pacheco, and Plutzer, 2008), and a presentation of young-Earth creationism as legitimate science would presumably confuse students about the basic tenets of science in general, and of evolution in particular. Because teachers’ personal views about a subject affect their teaching of the subject (Carlesen, 1991; Grossman, 1989), and because teachers with strong religious convictions accept evolution less often than their less-religious peers (Trani, 2004), it is not surprising that many of today’s biology teachers explicitly teach creationism in their biology courses. Although few biology teachers in public schools teach creationism without mentioning evolution, 20-25% of today’s biology teachers teach evolution <em>and</em> creationism in their courses (Moore, 2007, and references therein). Although a handful of creationism-based biology teachers are confronted for their malpractice (e.g., Rodney LeVake; see Moore, 2004), most are tolerated — and sometimes even encouraged — to teach creationism, possibly because of pressure from the public and administrators to ignore evolution and/or teach creationism (Cavanagh, 2005, Verango and Toppo, 2005). As Don Aguillard, the lead plaintiff in <em>Edwards v. Aguillard</em> (1987) noted in 1999 (Moore, 1999), “Creationism is alive and well among biology teachers.”</p>

<h3>When Biology Teachers Teach Creationism, What Do They Teach?</h3>
<p>When biology teachers teach creationism, they usually present only a particular version of the Judeo-Christian creation story. Moreover, these stories are often presented as a scientific alternative to evolution (Moore, 2008), despite the fact that creation science has “no scientific or educational value as science [because it] is simply not science” (<em>McLean v. Arkansas Board of Education</em>, 1982). Relatively few biology teachers who teach creationism present it as religious idea, philosophical idea, or as part of a survey of several religions (Moore, 2008).  They do not “teach the controversy,” in other words, but present the relationship between modern evolutionary biology and their faith as one of self-evident conflict, assuming (and teaching) that their version of creationism is the only true alternative.</p>

<h3>Does It Matter When Biology Teachers Teach Creationism?</h3>
<p>Yes—high school biology courses have a strong and lingering impact on students’ views of evolution and creationism (Moore and Cotner, 2009). Students who were taught creationism in high school know significantly less about evolution when they enter college than do students who were taught evolution in high school. Similarly, students who claimed that most of their knowledge of evolution came from non-school sources (e.g., the media, church) knew less about evolution than did students who claimed that their primary source of knowledge about evolution was their high school biology class (Moore, Cotner, and Bates, 2009). </p>

<h3>Solving the Problem?</h3>
<p>Several studies have claimed that additional evolution-related training will help improve the teaching of evolution in high schools. We are not nearly as optimistic. Although workshops and short-courses presumably help and encourage teachers willing to consider teaching evolution, focused instruction about evolution often does not affect students’ or teachers’ acceptance of evolution (Alters and Nelson, 2002; Chinsamy and Plaganyi, 2008). Moreover, these workshops will not reach creationism-based biology teachers who are dedicated to substituting their religious beliefs for science in their classes. </p>

<p>In our experience, these teachers rarely attend such workshops, even if they are paid to do so, and even then their acceptance of evolution is unaffected. After all, these teachers have access to and know the evidence for evolution – it’s widely available, including in the textbooks that they adopt and use in their classes – and they are not convinced by that evidence. We know of no evidence that the availability of such solely science-focused workshops, seminars, and other forms of evolution-related education will significantly affect what creationism-based biology teachers teach. Since the impediments to better teaching of evolution are primarily the philosophical and religious views of biology teachers, programs that do not address the more personal, “non-science” issues of science educators directly and effectively are likely to have little impact on what students learn in high-school biology classrooms.  Instead, if further fact-based instruction in evolution is part of the answer, it is likely to be most effective with young children, who are developmentally primed to seek explanations for natural phenomena.  However, evolution instruction is essentially absent prior to high-school biology; by high school, a student’s teleological demands have likely been met by supernatural explanations, creating a cycle of adults who know little about evolution and teach creationism-flavored biology.</p>

<p>Creationism has long been popular among biology teachers (Moore, 2007), and there is no evidence that improved state educational standards, proclamations by professional organizations, and decades of science education reform have made much difference.  As John Scopes commented almost 50 years ago, “I don’t think the world changes very rapidly” (Anonymous, 1966).</p>

<p><strong><a href="#notes"-1" onclick="toggle_visibility('notes-1');">View Literature Cited</a></strong></p>
<div style="display:none;" id="notes-1">
<p>Alters, B.J., and C.E. Nelson. 2002. Perspective: Teaching evolution in higher education. <em>Evolution</em> 56, 1891-901.</p>
<p>Anonymous. 1966. Monkey trial, 1966 style. <em>Christianity Today</em> 10 (15), 45-46.</p>
<p>Bandoli, J.H. 2008. Do state science standards matter? <em>American Biology Teacher</em> 70, 212-216.</p>
<p>Berkman, M.B. and E. Plutzer. 2011. Defeating creationism in the courtroom, but not in the classroom. <em>Science</em> 331, 404-405.</p>
<p>Berkman, M.B., J.S. Pacheco, & E. Plutzer. 2008. Evolution and creationism in America’s classrooms: A national portrait. <em>PLoS Biology</em> 6 (5), e124 doi:10.1371/journal.pbio.0060124</p>
<p>Brem, S.K., M. Ranney, & J. Schindel. 2003. Perceived consequences of evolution: College students perceive negative personal and social impact in evolutionary theory. <em>Science Education</em> 87 (2), 181-206.</p>
<p>Carlesen, S.W. 1991. Effects of new biology teachers’ subject-matter knowledge on curricular planning. <em>Science Education</em> 757, 631-647.</p>
<p>Cavanagh, S. 2005. Treatment of evolution inconsistent. <em>Education Week</em> 25 (11), 1, 26-27.</p>
<p>Chinsamy, A. and E. Plaganyi. 2008. Accepting evolution. <em>Evolution</em> 62, 248-254.</p>
<p><em>Edwards v. Aguillard</em>, 482 U.S. 578 (1987).</p>
<p>Gallup Poll. 2010. Four in 10 Americans believe in strict creationism. Retrieved December 26, 2012, from <a href="http://gallup.com/poll/145286/Four-Americans-Believe-Strict-Creationism.aspx">http://gallup.com/poll/145286/Four-Americans-Believe-Strict-Creationism.aspx</a></p>
<p>Gallup Poll. 2011. Evolution, creationism, intelligent design. Retrieved December 26, 2012, from <a href="http://gallup.com/poll/21814/evolution-creaionism-intelligent-design.aspx">http://gallup.com/poll/21814/evolution-creaionism-intelligent-design.aspx</a></p>
<p>Gallup Poll. 2012. In U.S., 46% hold creationist view of human origins. Retrieved December 26, 2012, from <a href="http://gallup.com/poll/155003/Hold-Creationist-View-Human-Origins.aspx">http://gallup.com/poll/155003/Hold-Creationist-View-Human-Origins.aspx</a></p>
<p>Gregory, T.R., and C.A.J. Ellis. 2009. Conceptions of evolution among science graduate students. <em>BioScience</em> 59 (9), 792-799.</p>
<p>Grossman, P.L. 1989. Learning to teach without teacher education. <em>Teachers College Record</em> 91, 191-208.</p>
<p>Harris Poll. 2009. What people do and do not believe in. Retrieved December 24, 2009, from <a href="http://www.harrisinteractive.com/harris_poll?pubs/Harris_Poll_2009_12_15.pdf">http://www.harrisinteractive.com/harris_poll?pubs/Harris_Poll_2009_12_15.pdf</a></p>
<p>Hokayem, H., & S. BouJaoude. 2008. College students’ perceptions of the theory of evolution. <em>Journal of Research in Science Teaching</em> 45, 395-419.</p>
<p><em>McLean v. Arkansas Board of Education</em>, 529 F. Supp. 1255, (E.D. Ark 1982). </p>
<p>Moore, R. 1999. The courage and convictions of Don Aguillard. <em>American Biology Teacher</em> 61, 166-174.</p>
<p>Moore, R. 2004. Standing up for our profession: A talk with Ken Hubert. <em>American Biology Teacher</em> 66, 325-327.</p>
<p>Moore, R. 2007. What are students taught about evolution? <em>McGill Journal of Education</em> 42, 177-186.</p>
<p>Moore, R. 2008. Creationism in the biology classroom: What do teachers teach and how do they teach it? <em>American Biology Teacher</em> 70, 69-73.</p>
<p>Moore, R. and S. Cotner. 2009. Rejecting Darwin: The occurrence and impact of creationism in high school biology classrooms. <em>American Biology Teacher</em> 71, 1-4.</p>
<p>Moore, R., S. Cotner, and A. Bates. 2009. The influence of religion and high school biology courses on students’ knowledge of evolution when they enter college. <em>Journal of Effective Teaching</em> 9 (2), 3-11. </p>
<p>Trani, R. 2004. I won’t teach evolution; it’s against my religion. And now for the rest of the story. <em>American Biology Teacher</em> 66, 419-427.</p>
<p>Verango, D. and G. Toppo. 2005. “Call to arms” on evolution. <em>USA Today</em>, March 24, p. B5.</p>
<p>Verhey, S.D. 2005. The effect of engaging prior learning on student attitudes toward creationism and evolution. <em>BioScience</em> 55, 996-1003. </p></div>]]></content:encoded>
        <pubDate>Tue, 22 Jan 13 04:44:18 -0800</pubDate>
        <dc:creator>Randy Moore, Cotner, Sehoya</dc:creator>
        <!--<dc:date>Jan 22, 2013 04:44</dc:date>-->
      </item>
            <item>
        <title>Southern Baptist Series: Evolution and the Problem of Evil</title>
        <link>http://biologos.org/blog/southern&#45;baptist&#45;series&#45;evolution&#45;and&#45;the&#45;problem&#45;of&#45;evil?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/southern&#45;baptist&#45;series&#45;evolution&#45;and&#45;the&#45;problem&#45;of&#45;evil?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Were one to propose creation by means of theistic evolution, some of the presuppositions for these responses to the problem of evil no longer function. Therefore, advocating some form of theistic evolution poses problems for standard explanations of the problem of evil.</description>
        <content:encoded><![CDATA[<p class="intro">Today we post the seventh and final installment in our Southern Baptist Voices series–a collection of essays from Southern Baptist scholars with BioLogos responses to their concerns and arguments. You can read more about the series and access all of the other papers <a href="/blog/sbv">here</a>, and get an overview in Dr. Kenneth Keathley's <a href="/blog/series/southern-baptist-voices-kenneth-keathely">introductory essay</a>.  <br> </br>
But because today's essay from Dr. Steve Lemke is the last in this nearly year-long project, and brings together many of the concerns expressed by his colleagues (not to mention many non-academic Christians), we're handling the response in a slightly different manner than we have in previous exchanges.  Instead of posting a separate response essay, we've chosen to highlight how the conversation has developed over these past months by including pertinent links to previous SBV exchanges within the paper itself, and responses to Dr. Lemke's key points in the sidebar: mouse over <a onmouseover="toggle_visibility('Response0');"onmouseout="toggle_visibility('Response0');">highlighted phrases</a>
 to show and hide this additional text. As BioLogos President Darrel Falk explains in his accompanying post (also published today), we think this method shows how prescient Dr. Lemke was when he wrote this paper early on in our dialogue, and how the conversation itself has suggested ways forward in many of the key areas of concern he cites.  Please be sure to read Dr. Falk's <a href="southern-baptist-voices-and-in-conclusion-.-">series summation</a>, as well.</p>


<div class="see-also" style="display:none;" id="Response0"><p>BioLogos comments will appear here in the sidebar.</p></div>


<h3>Evolution and the Problem of Evil</h3>


<p>Let me begin by expressing appreciation for the commitment and intent of BioLogos. Francis Collins was speaking at nearby Tulane University a couple of years ago when my son was a senior in high school, and I brought him along to hear this noted Christian biologist’s presentation to help prepare him for challenges he would experience (as he is now) in college. This is a tremendously valuable ministry. However, as a philosopher and a theologian I do have concerns about some of the theological implications of the BioLogos theistic evolution view, particularly regarding the problem of evil.</p>

<p>The problem of evil is one of the most persistent and intuitive challenges to the Christian faith and the existence of God.  The classic defenses or theodicies that have been used to answer this challenge include the <em>Freewill Defense</em> (God is not responsible for much of evil because it is caused by the free actions of humans), the <em>Soul Making Defense</em> (God allows or sends some evils or suffering in order to build human character in overcoming adversity), and the <em>Eschatological Defense</em> (although the cause of some suffering may be beyond our understanding, whatever suffering we may experience in this life cannot compare with an eternity of blessing in heaven).</p>


<img src="http://biologos.org/uploads/static-content/steve_lemke.jpg" alt="" height="230" width="168" style="float:right;margin:0px 0px 0px 10px;"  />

<p>These theodicies or defenses to the problem of evil, however, normally presuppose the standard view of divine creation.  Were one to propose creation by means of theistic evolution, some of the presuppositions for these responses to the problem of evil no longer function. Therefore, advocating some form of theistic evolution poses problems for standard explanations of the problem of evil.</p>

<p>Cornelius Hunter has recently published <em>Darwin’s God: Evolution and the Problem of Evil</em>,<sup>1</sup>  an excellently researched book which re-examines Darwin’s motives for developing the theory of evolution.  Hunter’s main thesis is that Darwin’s intent was not to undermine belief in the existence of God, but to afford a defense of God’s moral nature.  The viciousness of nature caused Darwin and some of his contemporaries to desire to disconnect God’s role in creation from this viciousness in nature, and the blind process of natural selection is the vehicle for disassociating God from the vulgarities of nature. In essence, then, Hunter’s argument is that Darwin’s theory was a form of theodicy – sheltering God’s goodness against the accusation that He is the author of the evil in nature.</p>

<p>Hunter’s thesis sounds hauntingly similar to that of the early Gnostics, who sought to insulate God from the evil material world. They therefore proposed intermediary <em>aeons</em>, archetypes, or a demiurge to isolate the purity of God from the evil of nature.  The Darwinian account sharply differs from the biblical account in at least three crucial ways:</p>

<ul><li>The Darwinian account removes God from being directly involved in much of creation by utilizing natural processes instead, while the biblical account presents God as directly involved in the details of creation, both in the beginning and throughout history through his providential care.</li>
<li>The Darwinian account blurs the distinction between humans and other animals, while in Scripture humans are a distinctive and special creation.</li>
<li>The Darwinian account presents God as apathetic and disinterested in the moral status of animals, while the scriptural account presents God (though giving primary focus to humans) as vitally interested in the moral status of animals, and indeed for the redemption of the entire created world.</li></ul>

<p>Another problem with Hunter’s thesis is that whatever Darwin’s original motivation might have been, the novelty of Hunter’s thesis underscores the fact that this is not how Darwin’s ideas predominantly have been used and understood. No one (including contemporary evolutionary biologists) seriously believes Darwin’s ideas as he presented them. <a onmouseover="toggle_visibility('Response1');"onmouseout="toggle_visibility('Response1');">Darwin’s ideas about evolution have themselves evolved.</a> (<a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-william-dembski-part-ii"> see Falk, Part 2</a>) So even if Hunter’s thesis were correct about Darwin’s original motivation for the problem of natural selection, this has little relevance to contemporary evolutionary biology.</p>


<div class="see-also" style="display:none;" id="Response1"><p>Although Darwin did relinquish his faith in the God of orthodox Christianity and the challenges outlined by Steve were central to the loss of that faith, as Steve himself goes on to point out, BioLogos is not Darwinian.   In my response to William Dembski, I discussed how my views differ from those that might be classified as Darwinian: <em>"I agree with Dembksi that Darwin’s views were not theologically neutral.  Darwin’s views on teleology, human exceptionalism, and miracles were not compatible with Christianity.  Quite simply, this is why I do not consider my views to be Darwinian and why I am not a Darwinist.</em>"</p></div>

<p>Any such Darwinian evolutionary biology also undermines classical defenses for God’s goodness. For example, the Christian group BioLogos has presented the perspective that God created all living organisms, including humans, through a gradual process that includes natural selection, group selection, genetic drift or other such physical processes, with God possibly intervening at some undefined points.  While this BioLogos approach (which might be labeled a variety of “gradualism” with regard to creation) includes a role for God in creation (as opposed to pure Darwinian evolution), some of the same problems involved with the problem of evil pertain to the BioLogos view as well. <a onmouseover="toggle_visibility('Response2');"onmouseout="toggle_visibility('Response2');">In fact, the specific role that God plays in evolution remains somewhat vague and ill-defined.</a> (<a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-william-dembski-part-i">see Falk, Part 1</a>) Without BioLogos providing a clearer and more precise differentiation between itself and Darwinian evolution – and thus building a clear “Chinese wall” between their view and that of Darwinian evolution -- these views appear to be very close, and the problems that pertain to one view pertain to the other view (at least in part) as well. The following problems arise with regard to the problem of evil in relation to forms of creation by gradualism.</p>


<div class="see-also" style="display:none;" id="Response2"><p>This is true. At the time Steve wrote his paper, BioLogos <em>had</em> been too vague about this topic.  Still, caution is required when offering scientific specifics about how God is acting in nature, because even Scripture itself is not specific as to the “how” of God’s actions.   However, Part 1 of the response to William Dembski does address Steve's concern and is summarized as follows: <em> “The Genesis narrative gives us no details about the mechanism by which God brought the universe and life into existence. God gave the charge: ‘Let there be lights in the dome of the sky...,’ ‘Let the waters bring forth…,’ ‘Let the land bring forth…,’ ‘Let the birds multiply…,’ and, in response, we are told, it happened. Scripture does not explain how it happened, although as we read God’s other book—the book of nature—we see that God’s work extended over a long period of time. In these details, the Bible does not say whether the “bringing forth” was fulfilled through God’s natural activity (that which is regular, ongoing, and can be described by science) or God’s supernatural activity (that which is not regular and predictable). Given the many examples of supernatural activity in Scripture, we human beings tend to expect that for something as special as creation of stars or new species, supernatural activity would have been required. But we cannot derive this from the scriptural account and, therefore, it is wise not to second-guess how God might have worked based on the Scriptures.”</em></p></div>

<h3>The Best of All Possible Worlds</h3>

<p>First of all, it is incumbent upon a good God to produce an optimally good world. We could not necessarily expect an evil or morally mixed God to produce a good world, but we have every reason to expect a good and beneficent God (Matt. 5:48; 1 John 1:5, 4:7-8) to produce the “best of all possible worlds” (given human freewill). In the biblical account, therefore, the evil and suffering we witness in nature and in human experience is not accountable to God because of a defective process in creation, but rather it is a result of the moral Fall of the first humans and subsequent sin by their descendents. <a onmouseover="toggle_visibility('Response3');"onmouseout="toggle_visibility('Response3');"> However, gradualism has no such vehicle to defend God against the accusation of being responsible for natural and physical evil and suffering.</a> <a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-kenneth- keathley-part-2">(see Applegate, Falk, and Haarsma, Part 2).</a>  </p>


<div class="see-also" style="display:none;" id="Response3"><p>Similarly, when Steve wrote this, we likely had not been careful enough to clearly lay out a statement about the BioLogos view on the historicity of Adam and Eve and the Fall.   This is no longer the case.  See, for example, Part 2 of our response to Kenneth Keathley:  <em>“Finally, then, whether or not Adam was a real person is a theological question, not a scientific one; the most science can say is that there was never a time when the human population from which all modern humans descended was as small as two individuals. This fact obviously creates interesting questions regarding the image of God and original sin, but nothing in evolutionary biology precludes the possibility that God began a covenantal relationship with a real, historical first couple who brought about spiritual death as a result of their disobedience.”</em></p></div>

<h3>Human Distinctiveness</h3>

<div class="see-also" style="display:none;" id="response4"><p>This Southern Baptist Voices series has given us the opportunity to clarity our views on human distinctiveness, as well.  In fact we believe there <em>is</em> a clear line between humankind and animals, as described in Part 2 of our response to William Dembski:  <em>“Even if all that Darwin says here were more or less true, it would still say nothing about that which makes humans truly exceptional, because—our linguistic and cognitive abilities aside—what makes us truly exceptional has less to do with biology than with the fact that God chose to enter into a unique relationship with humankind.  Dembski paraphrases an ideologically strict Darwinian view of man as “not worthy of special divine attention, and with no prerogatives above the rest of the animal world.” But Christians recognize that our material ordinariness is radically transformed by the presence and promises of God. Exactly as with the people of Israel among the nations, so humans among the animals: our special identity rests in the free choice of the Creator to give us his himself and his name. If we recognize that human specialness rests on God’s fellowship with and call upon us, and that we—alone of all creatures—are enabled by God to bear his image in the world, then anything Darwin said about the physical continuity between humans and animals is irrelevant.  In the way that matters most, we are not continuous with animals. For philosophical and theological reasons, Darwin did not recognize this. Darwin, I believe, was wrong.  I, like Dembski and like Southern Baptists in general, am not a Darwinist.”</em></p></div>

<p>Second, if God created all living species, including humans, through a gradual evolutionary process that includes common descent from nonhuman primates, <a onmouseover="toggle_visibility('response4');"onmouseout="toggle_visibility('response4');"> there is no clear line to draw a moral or spiritual distinction between humans and other living beings.</a> <a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-william-dembski-part-ii ">(see Falk, Part 2).</a>.  Yet fundamental to any view of a moral universe is the belief that humans are created in the image of God in a way that is uniquely above all other sensate species (Ps. 8:4-8), and included in this image is our soul and our moral capacity. It is difficult to imagine how humans could receive the image of God through some sort of physical process.  <a onmouseover="toggle_visibility('response5');"onmouseout="toggle_visibility('response5');"> Instead, the Bible describes God as being directly and personally involved in creating the human soul by breathing it into mankind  (Gen. 2:7). </a> <a href="http://biologos.org/blog/southern-baptist-voices-a-response-to-john-hammett-part-1">(see O’Connor, Part 1).</a> 
In the specific language of the biblical account (if not to be discounted, allegorized, or completely ignored), God created human souls directly, not indirectly through some impersonal process. <a onmouseover="toggle_visibility('response6');"onmouseout="toggle_visibility('response6');"> Gradualism offers no clear answer as to how a human soul reflecting the image of God could come about; in fact, such a unique thing in all of creation is everything but gradual or natural.</a>
<a href="http://biologos.org/blog/what-does-it-mean-to-be-human-a-response-to-bruce-little-part-2">(see Bishop, Part 2). </a>
</p>


<div class="see-also" style="display:none;" id="response5"><p>To understand our thinking on the “image of God,” consider Part 1</a> of Tim O’Connor’s response to John Hammett: <em>“The Christian Scriptures teach that we human beings have been created in God’s image. What does that mean? I am in substantial agreement with Dr. Hammett on this question. While I think that bearing God’s image involves our having or having a potentiality for certain basic psychological capacities that we associate with the term “person”, it has to do even more profoundly with our specific capacity for relationship with God. Indeed, I would go further and say that it is not just our having this capacity that makes us divine ikons, it is also the fact that God has activated this capacity—He has given the precious gift of His self-disclosure to us. Further still, it has an eschatological dimension, based on the revealed promise of a future development and perfection of each of us, and so by implication, of human nature itself, by almighty God. We are in the process of becoming fully human: beyond a descriptive biological or even psychological notion of human nature lies a teleological one—not a telos of nature but of God's loving purposes for us. Despite our unequally born deficits—physical, cognitive, emotional, and moral/spiritual—we are destined for a fuller, supernatural realization of our common nature.”</em></p></div>


<div class="see-also" style="display:none;" id="response6"><p>We have expanded on this subject, as well. Consider Part 2 of Robert Bishop’s response to Bruce Little:  <em> “Jesus’ human life in Scripture indicates that the divine image is a special relationship, or form of relationality: to be in relationship with the Father as a created, embodied person; to be sustained or upheld in this relationship with the Father through the perfecting Spirit; and to be in relationship with other persons and all of creation.  Moreover, this special relationship is also a vocation to mirror or reflect the glory, life and worship of God. If to be the image of God is to be sustained in a special relationship with the Father, each other and creation through the Spirit, then the imago Dei is not grounded in intrinsic qualities that particularly mark humans as distinct from the rest of the animals, as essentialism would have it. Christians can understand Genesis 1: 24-31 and 2: 4-5, as many of the Patristic Fathers did, as an account of our unity and connection with the rest of creation as well as of our special relationship with God and role in God’s kingdom. So if Father, Son and Spirit created human beings through evolutionary processes, we would have continuity and connection with all of creation while still being the imago Dei. Evolution does not threaten human specialness before God unless it is viewed as a replacement for divine creative activity (which, of course, is what Richard Dawkins, Jerry Coyne and Answers in Genesis all do repeatedly).” </em></p></div>

<h3>Whence Cometh Freedom?</h3>

<p>Thirdly, even if God intervened at various points in theistic evolution to create new forms from which other species evolve, this does not afford a satisfactory account of human freewill. If humans are not a unique and distinct creation (as the biblical account makes quite clear), but are with other apes the product of a single ancestor, from whence did freewill arise? How can we account for some mutations having freewill and others not having it?</p>

<p>Some quasi-materialists propose some form of epiphenomenalism in which the mind emerges somewhat magically from material cells. This proposal is devoid of any convincing scientific evidence, but it is the only alternative left for materialists to espouse in order to account for some of the most basic human intuitions – that our minds are more than merely a physical organ, that our choices are genuine expressions of freewill, and that we are free moral agents who are responsible for our actions.</p>

<p>Evolutionary biology has no scientific evidence to respond to these basic human intuitions other than to assert that “there is no ghost in the machine” and <a onmouseover="toggle_visibility('response7');"onmouseout="toggle_visibility('response7');"> that any apparent choices are actually mechanical outworking of hard determinism predetermined by prior physical causes.</a>
<a href="http://biologos.org/blog/southern-baptist-voices-a-response-to-john-hammett-part-2">(see O’Connor, Part 2).</a> Therefore, if human choices are merely illusions, humans cannot be held morally accountable, all blame and responsibility reverts back to the God who created this world.</p>

<div class="see-also" style="display:none;" id="response7"><p>Actually, science <em>has</em> shown that new properties emerge as we move from the very small components of a system to the system as a whole.  We are, even according to mainstream science, more than the sum of our parts, and more than reductionists would have us believe.  Tim O’Connor addresses this point in Part 2 of his response to John Hammett:  <em>“Many of the spectacular successes of twentieth-century science consisted in showing how certain ‘high-level’ features (liquidity and other molecular properties; biological life itself) can be seen to result directly from the properties and interactions of lower-level entities. These theories are elegant and persuasive on the evidence. However, alongside such reductionist successes we have seen the rise of the sciences of complex systems, which appear to indicate the importance of higher-level features of organized systems acting as fundamental constraints upon the lower-level behavior of the very entities that compose them.  How exactly we should understand such ‘emergent’ or ‘holistic’ features in different sorts of complex physical systems is a hotly debated question by theorists. I would claim only that it is especially plausible to see human consciousness and the capacities that it enables as metaphysically irreducible to—something ‘over and above’—the underlying physical properties that give rise to them.”</em></p></div>

<h3>The Problem of Pain</h3>

<p>Fourth, gradualism has no moral explanation for animal pain. If humans are the product of an earlier ancestor, it may have taken thousands or millions of years for life to evolve to that point, or for humans to evolve from an earlier primate ancestor. <a onmouseover="toggle_visibility('response8');"onmouseout="toggle_visibility('response8');"> How can the pain of these creatures (some of them quasi-human or proto-human) be justified? </a> <a href="http://biologos.org/blog/evolution-creation-and-the-sting-of-death-part-2">(see Schloss, Part 2)</a> 
This is specifically the issue that worries many Christian ethicists about cloning. Each experiment in animal cloning has produced hundreds of “monsters” before the clone is successful. What if we were cloning humans? What would be the moral implications of creating hundreds of “monsters” just to develop one clone?</p>

<div class="see-also" style="display:none;" id="response8"><p>Although the problem of pain is an extremely significant issue, it is not clear that it rules out the possibility of God having chosen to create through the evolutionary process. In Part 2 of Jeff Schloss’s response to John Hammett, he wrote: <em>“The possibility of pain may be requisite to that of fulfillment, or death may be conjoined to life as a function of metaphysical, logical, or biotic necessity. Death and its pains may be fully consoled, and necessary for the experience of consolation, in a life to come. The existence of death, in a finite world, may be a necessary form of “taking turns” so that both the number and the diversity of creatures that experience and manifest life are maximized. The capacity for pain and the possibility of relinquishing life itself may present the option—even to animals—for the most morally salient and fullest expression of life’s goodness: caring for others to the point of sacrifice. None of these approaches is problem-free, though neither does it appear that any may be dismissed out-of-hand.”</em></div>

<div class="see-also" style="display:none;" id="response9"><p>Significantly, Part 3 of Jeff Schloss’s response to John Laing is entitled "The Evolutionary Role of Death and Natural Selection." If one was to read only one posting in the entire series, I think it likely that this is the one I would most recommend.  Jeff very briefly summarizes some recent developments in evolutionary biology including evidence for the significance of cooperation between individuals (as opposed to competition) as a shaping force in life’s history.  He draws things to a conclusion by stating, <em>“Scientifically death <strong>does not </strong>'drive' evolution.” </em>(Emphasis in the original.)
</p></div>


<p>The unanimous view is that this would be morally unjustifiable, but <a onmouseover="toggle_visibility('response9');"onmouseout="toggle_visibility('response9');"> this is uncannily similar to the notion of creating animals who suffer for millions of years before evolution finally produced humans. </a> <a href="http://biologos.org/blog/evolution-creation-and-the-sting-of-death-part-3">(see Schloss, Part 3)</a>
 In the biblical creation accounts, pain and suffering comes into the world after the Fall and as a result of the Fall of the earliest humans, and thus God is absolved of direct responsibility for this pain.  In this gradualist account, pain and suffering precede the Fall. Millions of generations of sensate beings would have suffered and died before the Garden of Eden. <a onmouseover="toggle_visibility('response10');"onmouseout="toggle_visibility('response10');"> Why would God allow this suffering of innocents for millions of years?</a> <a href="http://biologos.org/blog/evolution-creation-and-the-sting-of-death-part-3 ">(see Schloss, Part 3)</a>
</p>


<div class="see-also" style="display:none;" id="response10"><p>We do not believe there is a clear answer to this question. However, Part 3 of Jeff’s response to Laing summarizes both our sentiments and the incompleteness of our knowledge this way: <em>“Unlike John, I do not see anything in evolutionary theory to reduce, and I see much to augment the sense of grandeur and (for that matter) the appreciation of sheer goodness—both earthly and divine—evoked by the wonders of the living world.  Yet grandeur and goodness are not perfection. My Dad is still dying. I still wince at the suffering of clearly sentient animals. And, truth be told, I tremble at the biblical images of universal herbivory: even metaphors are metaphors of something, and in the case of biblical revelation, that something can be taken to be real and important. So like John, I confess to profound gratitude tempered with a lingering unease at the state of nature. Though I believe in a Fall, this unease is not rationally relieved by attributing to an Adam the present state of all nature. Nor is it resolved by the various alternative considerations I’ve described and which, taken together, seem to have considerable merit but not sufficiency. Notwithstanding, I thankfully affirm that 'I have known the goodness of the Lord in the land of the living.' And I look to the day when we may say together, 'My ears had heard of You, but now my eyes have seen You.' (Job 42:5)"</em></p></div>

<div class="see-also" style="display:none;" id="response11"><p>In Part 2 of Schloss’s response to John Laing, he states that<em> “It is not clear that evolution puts God on the hook in any way that is not generated by the long-recognized, wondrous-though-uncertain testimony of creation itself. As Blaise Pascal noted, 'If the world existed to instruct man of God, His divinity would shine through every part in it in an indisputable manner; but as it exists only by Jesus Christ, and for Jesus Christ, and to teach men both their corruption and their redemption, all displays the proofs of these two truths. All appearance indicates neither a total exclusion nor a manifest presence of divinity…" </em></p></div>

<p>Ironically, Hunter’s Darwinian explanation in Darwin’s God doesn’t work for the BioLogos perspective at this point, because God is somewhat more directly involved at several steps in creation than in the purely Darwinian perspective, so it is <a onmouseover="toggle_visibility('response11');"onmouseout="toggle_visibility('response11');"> God who must shoulder the blame for this undeserved pain.</a> <a href="http://biologos.org/blog/evolution-creation-and-the-sting-of-death-part-2 ">(see Schloss, Part 2)</a></p>

<div class="see-also" style="display:none;" id="response12"><p>Here is Jeff Schloss’s take on this issue from his Part 1: <em>"Although all Christians have traditionally affirmed resurrection (for both the redeemed and unredeemed), there have been longstanding debates about whether the life that is redemptively restored in Christ and the death that is brought about by sin is 'spiritual' (involving the vitality or disruption of communion with God) or 'physical' (involving the viability or dissolution of biotic function). Of course these are not mutually exclusive, and perhaps they are not even ultimately distinguishable. But however one understands death to be an incursion upon human telos, it does not answer or even clearly bear upon the evolution-related question of whether other living beings beyond and before humans were created to be immortal. “Violence” in western thought has often been understood as a disruption of natural ends: but do we assume that all creatures share the same “natural end”? For instance, is the nature or telos of worms immortality? Is death a violation of all creaturely natures that was therefore absent from earth prior to initial human intimacy with and subsequent estrangement from God? Significantly, not a single one of the scriptures John cites explicitly refers or even vaguely alludes to the general place of death in the natural order: virtually every one emphatically focuses on death as a consequence of sin for uniquely human moral agents, and—correspondingly—on eternal life as God’s special purpose for supernaturally redeemed humanity.  Indeed, I am at a loss to find in the entire Bible a scripture that clearly teaches death across the entire biotic realm postdates and is a consequence of human sin. Neither is this point affirmed or even mentioned in the most prominent historic creeds of Christian orthodoxy." </em></p></div>


<p>Another attempt to affirm a gradualist view of creation in which pain preceded the creation of humans was by William Dembski, who in his book The End of Christianity: Finding a Good God in an Evil World<sup>2</sup> proposed that the animal world existed in pain for millennia before the creation of humans, and thus the pain of these animals was applied retroactively from the later Fall (pp. 9-10).  This proposal was not well received by many in the evangelical world because it depicts God causing pain to sensate beings even before the cause of the pain took place, and Dembski ultimately felt compelled to post a clarification of his views.<sup>3</sup> So, the reality of animal pain before the Fall in the gradualist account of creation heightens the problem of evil rather than resolving it.</p>



<h3>Death and the Nature of God</h3>

<p>Fifth, in orthodox Christian theology, death is seen as the ultimate punishment for the Fall of Adam and Eve. There was a time of created goodness from when humankind has fallen.  <a onmouseover="toggle_visibility('response12');"onmouseout="toggle_visibility('response12');"> All human suffering, animal suffering, natural disasters, and death was ultimately the result of the God’s punishment for human sin</a>, the curse after the Fall as described in Genesis 3. <a href="http://biologos.org/blog/evolution-creation-and-the-sting-of-death-part-1 ">(see Schloss, Part 1)</a>   </p>


<p>However, <a onmouseover="toggle_visibility('response13');"onmouseout="toggle_visibility('response13');"> in the gradualist evolutionary account, there is no Fall.</a><a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-kenneth- keathley-part-2">(see Applegate, Falk, and Haarsma, Part 2).</a>  
 If anything, there is a “rise,” as human beings “come of age” and become morally responsible at some point in the process of evolution from prehuman primates.  There are multiple problems with this proposal from a theological perspective:</p>
<div class="see-also" style="display:none;" id="response13"><p>Lemke’s concerns about the reality of Adam, Eve, and Eden in this section are best answered with this brief statement from Part 2 of our response to Keathley: <em>“[N]othing in evolutionary biology precludes the possibility that God began a covenantal relationship with a real, historical first couple who brought about spiritual death as a result of their disobedience”</em></div>


<ul><li>It is one thing to apply symbolic interpretations to the first three chapters of Genesis; it is another <a onmouseover="toggle_visibility('response13');"onmouseout="toggle_visibility('response13');"> to eliminate the historical reality of the Fall altogether.</a><a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-kenneth- keathley-part-2">(see Applegate, Falk, and Haarsma, Part 2).</a>  
.</li>


<li>In the biblical view of creation, God creates humans in a paradisical Eden, and humans are ejected from Eden after their sin. <a onmouseover="toggle_visibility('response13');"onmouseout="toggle_visibility('response13');"> In the gradualist view,</a><a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-kenneth- keathley-part-2">(see Applegate, Falk, and Haarsma, Part 2).</a> there never was an Eden, and humans never enjoyed the kind of original created goodness described in Scripture.</li>



<li>In the biblical view of creation, separation from God and death are the punishments for human sin.  In the gradualist view, there never was an Edenic paradise, and persons were created to die. Sin has no real causal connection with <a onmouseover="toggle_visibility('response14');"onmouseout="toggle_visibility('response14');"> physical death. </a>  <a href="http://biologos.org/blog/evolution-creation-and-the-sting-of-death-part-1">(see Schloss, Part 1)</a></li>

<div class="see-also" style="display:none;" id="response14"><p>As Jeff Schloss reminds us in Part 1 of his paper, <em>"Although commentators differ over whether the Pauline description of death in Romans 5 refers to spiritual and/or physical death, the passage clearly focuses on humans. It identifies humanity as the subject of infection, instigated and promulgated by initial and ongoing human sin: “in this way death came to all people, because all sinned” (Romans 5:12)."</em></p></div>


<li>In the biblical view of creation, humans were created “a little lower than the angels, crowned with glory and honor” (Ps. 8:5).  In the gradualist view, humans emerged from previously created nonhuman primates.  <a onmouseover="toggle_visibility('response15');"onmouseout="toggle_visibility('response15');"> This is a profound re-envisioning and diminishment of the Christian anthropology
 found in the Bible. </a>  <a href="http://biologos.org/blog/southern-baptist-voices-a-biologos-response-to-william-dembski-part-ii">(see Falk, Part 2)</a></li>
<div class="see-also" style="display:none;" id="response15"><p>Darrel Falk put it this way: <em>”Christians recognize that our material ordinariness is radically transformed by the presence and promises of God. Exactly as with the people of Israel among the nations, so humans among the animals: our special identity rests in the free choice of the Creator to give us his himself and his name. If we recognize that human specialness rests on God’s fellowship with and call upon us, and that we—alone of all creatures—are enabled by God to bear his image in the world, then anything Darwin said about the physical continuity between humans and animals is irrelevant." </em></p></div>


<div class="see-also" style="display:none;" id="response16"><p>We think this last significant issue raised by Dr. Lemke shows just how important this Southern Baptist Voices Series has been, because it highlights the fact that many of the theological concerns raised here do not emerge from the scientific data about life's origins or the discipline of evolutionary biology.  There are surely theologians who look at creation this way, but to the extent they do so, their views emerge from their own theological considerations; they are not obligatory extrapolations which emerge from the science itself.</p></div>


<li>The Bible describes God creating a beautiful paradisicial Eden with sinless humans, which was lost only because of human rebellion and sin. The gradualist account posits God creating a substandard world that had to evolve to reach even the sad levels of contemporary life.  This imperfect creation reflects on the nature of God. Why would a perfectly good God create such an imperfect world?  Why or how could a moral God create humans to be already fallen? Orthodox Christian theology affirms that God is already perfect in all His attributes, and does not evolve or change in His essence.  The theology more apposite to the gradualist account is Process Theology, in which evolution in creation mirrors evolution within God himself, as he moves from a powerful but imperfect being toward a more perfect being.  In fact, Process Theology was designed with a view to harmonizing Christian theology with evolutionary presuppositions.  But Process Theology is not held to be orthodox by most evangelical Christians, particularly with regard <a onmouseover="toggle_visibility('response16');"onmouseout="toggle_visibility('response16');"> the nature and perfection of God.</a> </li></ul>


<p>At the core of the Christian worldview is the biblical metanarrative of creation, fall, and redemption.  The evolutionary gradualist perspective radically rewrites this standard Christian account by essentially merging the creation and fall into a single event.  Humans were created as finite and fallen, not placed in a paradise with created righteousness.  This gradualist approach squares well with an evolutionary account, but it does not square well with the biblical creation accounts in Scripture.</p>

<h3>Notes</h3>
<p class="date">1. Cornelius Hunter, <em>Darwin’s God: Evolution and the Problem of Evil </em>(Waco: Brazos Press, 2001).<br>
2. William A. Dembski, <em>The End of Christianity: Finding a Good God in an Evil World</em> (Nashville: B&H Academic, 2009).<br>
3. Tom Nettles, review of <em>The End of Christianity: Finding a Good God in an Evil World</em>, by William Dembski, in <em>Southern Baptist Journal of Theology</em> 13.4 (2009): 80–85.  A partial defense and Dembski’s clarification are found in David Allen, “A Reply to Tom Nettles’ Review of William A. Dembski’s <em>The End of Christianity: Finding a Good God in an Evil World,</em>” a white paper at the Center for Theological Research (February 2010), available online (<a href="http://www.baptisttheology.org/documents/AReplytoTomNettlesReviewofDembskisTheEndofChristianity.pdf">PDF</a>).</p>
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        <pubDate>Fri, 28 Dec 12 10:43:42 -0800</pubDate>
        <dc:creator>Steve Lemke</dc:creator>
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        <title>Introducing the BioLogos Navigator</title>
        <link>http://biologos.org/blog/introducing&#45;the&#45;biologos&#45;navigator?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/introducing&#45;the&#45;biologos&#45;navigator?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Part of BioLogos mission is to show how all things hold together in Christ—to show how a Christian worldview integrates the knowledge we have of God through the Scriptures with the knowledge we have of God through the other areas in which He reveals himself as Creator and Redeemer.</description>
        <content:encoded><![CDATA[<p>When we at BioLogos affirm that, “all things hold together in Christ,” what do we mean?  In short, we believe that there is no aspect of creation or of human experience that does not fall under the sovereignty and authority of God, and that He does not claim for himself and intend for redemption.  After all, at his resurrection, Jesus himself said, “All authority in heaven and on earth has been given to me” (Matthew 28:18). But more than just proclaiming God’s sovereignty over creation, we believe that God is revealing himself in every aspect of creation, as well—that led by the Holy Spirit, we will find pointers to God wherever we turn our gaze.  Christian knowledge, therefore, is not limited to the study of the Scriptures or of Church History, but includes the study of the natural world and of all of human culture, as well.  In fact, to fully appreciate God’s abundant grace and providence, we need to be looking to all of these domains of knowledge as domains of revelation, too. </p>

<p>Part of the BioLogos mission, then, is to show <em>how</em> all things hold together in Christ—to show how a Christian worldview integrates the knowledge we have of God through the Scriptures with the knowledge we have of God through the other areas in which he reveals himself as Creator and Redeemer.  Our website contains a wealth of Christian scholarship in a wide range of fields—from biology, to cosmology, to mathematics, to Biblical studies, to history, to theology—all demonstrating that the best contemporary science is compatible with Biblical Christian faith. But today we introduce a new tool—the BioLogos Navigator—to make these posts more accessible, and to show how they inter-relate (see sidebar on the right).  </p>

<p>Modeled on the astrolabes that early astronomers and sailors used to orient themselves under the heavens, our Navigator makes the cross of Christ the starting point by which we understand the cosmos.  Each of the four arms of the cross represents one of the domains of knowledge and experience through which God reveals himself to the world: Scripture, the Church, Nature and Culture.  These domains are not in opposition to each other, but are complementary and inter-related areas through which we can recognize God at work in the world. Linking these four domains is a network of specific topics relevant to the science and faith conversation.  Their arrangement suggests how each relates to the four domains but also to teach other.  Clicking on an individual topic tag highlights not only that topic, but other topics that are linked to it—sometimes in unexpected ways.</p>

<p>Clicking a topic tag a second time takes you to the Topic Landing page: a curated selection of the best resources on that subject from the BioLogos archives.  (The image above shows the <em><a href="http://biologos.org/navigator/Christianity+&+Science+-+Then+and+Now">Christianity & Science—Then and Now</a></em> Landing page, complete with Navigator and highlighted tags.) At the bottom of each page is a link to our Resource Finder, where you can investigate additional materials on that topic, as well. By exploring the relationships between the topics on the Navigator itself, and by delving deep into each topic via the resources presented on the landing pages, readers can focus on specific aspects of the harmony between science and Christian faith while also getting the wide view of God’s providential work in all things in the heavens and on the earth. </p>

<p>In the coming days and weeks, the BioLogos Navigator will be more fully integrated into the rest of the site, accessible directly from the Forum homepage and from the Resources dropdown list at the top of every page.  We’ll also be including features that help place each blog post on the “knowledge map” defined by the domains and topic tags.  Finally, the Topic Pages will also be periodically updated with the latest and best new materials in each topic. In the meantime, <strong>you can access the Navigator by clicking anywhere on the small image in the sidebar, above</strong>, and find a link to this post at the upper right corner of our homepage.  So take some time to explore our site with this new tool, which we think will to help orient our readers in the science and faith conversation, while always pointing to Jesus, the Christ, through whom all things were made.</p><br />]]></content:encoded>
        <pubDate>Thu, 27 Dec 12 06:19:49 -0800</pubDate>
        <dc:creator>Mark Sprinkle</dc:creator>
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        <title>Series: “And God Saw That It Was Good”: Death and Pain in the Created Order</title>
        <link>http://biologos.org/blog/series/death&#45;and&#45;pain&#45;in&#45;the&#45;created&#45;order?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/death&#45;and&#45;pain&#45;in&#45;the&#45;created&#45;order?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The tension generated by our understanding of God’s character, as revealed in the Bible, and by the reality of the natural world around us has been the focus of much debate within the Christian church since the first century. This series examines critically several of the proposed solutions to this problem, viewing them from the perspective of a geologist, paleontologist, and orthodox evangelical Christian.</description>
        <content:encoded><![CDATA[<h3>To Mrs. Professor in Defense of My Cat’s Honor and Not Only</h3>

<p><em>My valiant helper, a small-sized tiger <br />
Sleeps sweetly on my desk, by the computer,<br />
Unaware that you insult his tribe.<br /><br />

Cats play with a mouse or with a half-dead mole.<br />
You are wrong, though: it’s not out of cruelty.<br />
They simply like a thing that moves.<br /><br />

For, after all, we know that only consciousness<br />
Can for a moment move into the Other, <br />
Empathize with the pain and panic of a mouse.<br /><br />

And such as cats are, all of Nature is. <br />
Indifferent, alas, to the good and the evil. <br />
Quite a problem for us, I am afraid.<br /><br />

Natural history has its museums, <br />
But why should our children learn about monsters,<br />
An earth of snakes and reptiles for millions of years?<br /><br />

Nature devouring, nature devoured, <br />
Butchery day and night smoking with blood. <br />
And who created it? Was it the good Lord?<br /><br />

Yes, undoubtedly, they are innocent, <br />
Spiders, mantises, sharks, pythons. <br />
We are the only ones who say: cruelty.<br /><br />

Our consciousness and our conscience <br />
Alone in the pale anthill of galaxies <br />
Put their hope in a humane God.<br /><br />

Who cannot but feel and think, <br />
Who is kindred to us by his warmth and movement, <br />
For we are, as he told us, similar to Him.<br /><br />

Yet if it is so, then He takes pity <br />
On every mauled mouse, every wounded bird. <br />
Then the universe for him is like a Crucifixion.<br /><br />

Such is the outcome of your attack on the cat:<br />
A theological, Augustinian grimace, <br />
Which makes difficult our walking on this earth.</em></p>

<p>–Czeslaw Milosz,<sup>1</sup>  translated by the author and Robert Hass</p>

<h3>The Problem</h3>

<p>The poem above communicates in a very poignant and profound way the essence of the theological problem of death, pain, and suffering in the natural world—what has been referred to as “natural evil.” As we will see, it may also point to at least one aspect of a Christian response.</p>

<p>I have become convinced that one of the fundamental issues underlying much of the resistance of many Christians to an ancient, evolving creation is that of the problem of “natural evil.” “Natural evil” is also very often a primary focus of those who reject a personal and compassionate God, as it was for Darwin himself. The issue of theodicy thus seems not only to drive many people of Christian faith away from an acceptance of the conclusions of modern science, but also to drive members of the scientific community away from a serious consideration of the claims of the Christian faith. The topic is important, then not because its solution is central to the validity of the Christian faith, but because it often serves as an unnecessary stumbling block to a productive engagement of both science and faith.</p>

<p>The tension generated by our understanding of God’s character, as revealed in the Bible, and by the reality of the natural world around us has been the focus of much theological and philosophical debate within the Christian church since the first century. This article sets out to examine critically several of the proposed solutions to this problem, viewing them from the perspective of a geologist, paleontologist, and orthodox evangelical Christian.</p>

<p>The theological problem of death and pain emerges from the following propositional statements:</p> 

<ol><li>Scripture consistently declares the absolute goodness of God and the very goodness of his creation. Furthermore, Scripture declares God’s love and care for creation, and the glory and praise it returns to him.</li>

<li>Scripture also confesses a transcendent God who is omnipotent in power, yet immanent in creation as well. God’s creative activity is not described as being confined to some past event at the beginning of time, but as a present and continuing reality. God upholds creation in its being from moment to moment, and is creatively active in its history. This understanding of God’s relationship to creation has been well articulated by Jürgen Moltmann.<sup>2</sup></li>

<li>In seeming conflict with these confessions of God’s character, we observe death, pain, and suffering as ubiquitous, even integral, aspects of the creation around us.</li></ol>

<p>The apparent conflict between God’s goodness and the presence of pain and suffering is made especially acute when we consider the nonhuman creation.<sup>3</sup> How can we accommodate the death and suffering of animals within a theology that declares both God’s omnipotence and goodness? C. S. Lewis forcefully puts the issue before us in his book <em>The Problem of Pain</em>:</p>

<blockquote>The problem of animal suffering is appalling; not because the animals are so numerous ... but because the Christian explanation of human pain cannot be extended to animal pain. So far as we know beasts are incapable either of sin or virtue: therefore they can neither deserve pain nor be improved by it.<sup>4</sup></blockquote>

<p>Because the issue of animal pain so directly impacts our understanding of the goodness of creation, I will focus particularly on solutions to the problem as posed by Lewis.</p>

<p>How do we then reconcile the goodness of God who is immanent and active in his creation with the death, pain, and suffering we see embedded within it? There seem to be two basic alternative approaches to this dilemma.<sup>5</sup></p> 

<ol><li>Natural evil can be attributed to something independent of God and acting against his will. This position threatens to limit God’s power and freedom.</li>

<li>Natural evil can be considered a part of God’s good purpose for creation, and either directly willed or permitted by him. Such a view would seem to bring into question God’s goodness and love for his creatures.</li></ol>
 
<p>The tension between these alternatives—and efforts to avoid their negative theological consequences—surface in many of the proposed solutions to this problem.</p>

<p class="intro">In part 2, we start to look at some of the proposed solutions, beginning with the idea that a perfect creation was corrupted by a fall.</p>

<h3>Notes</h3>

<p class="date">1. This poem was included in a collection of poems that was one of two works by Czeslaw Milosz mentioned in a review article by Michael Ignatieff, “The Art of Witness,” <em>New York Review of Books</em> (March 23, 1995). I thank Carol Regehr for bringing my attention to this work.<br />
2. Moltmann refers to this aspect of God’s creative activity in history as “continuous creation.” Jürgen Moltmann, <em>God in Creation</em> (Minneapolis, MN: Fortress Press, 1993), 206–14.<br />
3. I will not address here arguments concerning the degree to which animals experience pain. This issue is considered by Robert Wennberg in “Animal Suffering and the Problem of Evil,” <em>Christian Scholar’s Review</em> 21 (1991): 120–40. It is obvious to me that, for many animals at least, pain and suffering are a very real conscious experience.<br />
4. C. S. Lewis, <em>The Problem of Pain</em> (New York: Macmillan Publishing, 1962), 129.<br />
5. As stated by John Hick, in <em>Evil and the God of Love</em>, rev. ed. (New York: HarperCollins Publishers, 1977): “For every position that maintains the perfect goodness of God is bound either to let go the absolute divine power and freedom, or else to hold that evil exists ultimately within God’s good purpose” (pp. 149–50).</p>
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        <pubDate>Sat, 24 Nov 12 06:00:30 -0800</pubDate>
        <dc:creator>Keith Miller</dc:creator>
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        <title>Katharine Hayhoe: Evangelical Christian, Climate Scientist</title>
        <link>http://biologos.org/blog/kathryn&#45;hayhoe&#45;evangelical&#45;christians&#45;climate&#45;scientist?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/kathryn&#45;hayhoe&#45;evangelical&#45;christians&#45;climate&#45;scientist?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>As an Evangelical and a scientist, Katharine Hayhoe is already a member of a rare breed.  As a climate change researcher who is also married to an evangelical Christian pastor, she is nearly one of a kind.</description>
        <content:encoded><![CDATA[<p>As an evangelical scientist, Katharine Hayhoe is already a member of a rare breed.  As a climate change researcher who is also married to an evangelical Christian pastor, she is nearly one of a kind.  In these three videos, Hayhoe divulges her beliefs about God, climate change, and the difficulties of believing in both those things.</p>

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<p>The first video, “10 Questions with Katherine Hayhoe”, introduces the scientist in a brief and lighthearted interview.  Hayhoe is presented with 10 questions concerning her personal life and beliefs.  When asked, she explains that one thing people should know about Christianity is that having a relationship with the God of the universe is one of the most incredible experiences that a person can have. As the video unfolds, the viewer quickly begins to realize that, despite her unique profession of two seemingly incompatible beliefs, Hayhoe is a remarkably sane and “normal” individual.  Her role model, she explains, is her father-- the person who first introduced her to science and showed her that it could be “really cool”.  On a more serious note, the scientist admits that being both a scientist and a Christian can be difficult.  The most frustrating thing about her position, she says, is the amount of disinformation which is targeted at her very own Christian community.</p>
 
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<p>In the second video, “Climate Change Evangelist”, Katharine Hayhoe delves into deeper discussion of the perceived conflict between climate change and Christian faith.  She explains that admitting her identity as a Christian scientist can be uncomfortable.  Since evangelicals are the targets of much disinformation concerning science in general -- and specifically the science surrounding climate change -- many people in the church have a misguided view of the subject and do not look kindly at her career choice.  One woman encountered by Hayhoe at a church in Texas, for example, believed that global warming was a lie taught in schools to mislead her children.  In an effort to realign misguided views like these, Katharine Hayhoe and her husband wrote a book addressing the deep-rooted emotions often associated with climate change.  People fear that addressing the climate issue will bring forth changes in the economy and uproot their way of life.  However, Hayhoe encourages her viewers to act out of love, as the Bible calls us to do, rather than out of fear.  Acting out of love inspires us to consider the poor and disadvantaged people around the globe when we respond to the reality of a changing climate.</p>

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<p>In the final segment of this three part video montage, Hayhoe addresses the question of what climate change means. Specifically, she is concerned about how global warming affects people on a personal level.  While global warming generally brings to mind melting ice caps and polar bears, its implications are far more widespread, affecting the lives of everyone around the world- from cotton farmers in Texas to public health workers in Chicago.  If nothing is done to change current emission levels, the number of days per year which exceed 100 degrees Fahrenheit, for example, will begin to increase dramatically, and if emissions are increased, many areas will even develop extreme conditions like those seen currently in Death Valley.  Hayhoe’s goal is to demonstrate clearly that the only way to preserve the world for future generations is to significantly reduce dependence on inefficient means of getting energy and instead transition to cleaner renewable energy sources.</p>

<p><strong>Editor's Note: These videos first appeared on the Nova program <a href="http://www.pbs.org/wgbh/nova/secretlife/scientists/katharine-hayhoe/" target="_blank">"The Secret Life of Scientists & Engineers"</a>.</strong></p>]]></content:encoded>
        <pubDate>Fri, 09 Nov 12 05:00:21 -0800</pubDate>
        <dc:creator>Katharine Hayhoe</dc:creator>
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        <title>Series: It&apos;s an Old World After All</title>
        <link>http://biologos.org/blog/series/its&#45;an&#45;old&#45;world&#45;after&#45;all?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/its&#45;an&#45;old&#45;world&#45;after&#45;all?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In our sixth BioLogos videocast, we take a look at the age of the Earth. We explain four methods scientists have used to determine that age: tree ring, lake varve, radiometric, and seafloor spread dating, and also offer some theological insight on how an old earth can fit with the first chapters of Genesis.</description>
        <content:encoded><![CDATA[<p>In our last Videocast, we explored some of the ways scientists have been able to determine the age of hominid fossils. Today, in our sixth BioLogos videocast, we extend the question to the age of the Earth. The first section, featured today, explains four methods scientists have used to determine that age: tree ring, lake varve, radiometric, and seafloor spread dating.</p>

<p>The script was written by biology student Joy Walters, with help from BioLogos president Darrel Falk.</p>
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        <pubDate>Tue, 06 Nov 12 07:00:44 -0800</pubDate>
        <dc:creator>Joy Walters</dc:creator>
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        <title>Series: Behe, Lenski and the “Edge” of Evolution</title>
        <link>http://biologos.org/blog/series/behe&#45;lenski&#45;and&#45;the&#45;edge&#45;of&#45;evolution?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/behe&#45;lenski&#45;and&#45;the&#45;edge&#45;of&#45;evolution?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this series, we reexamine the claim made by Intelligent Design proponent Michael Behe to have found a limit to “Darwinian” evolution in light of recent results from the laboratory of Richard Lenski.</description>
        <content:encoded><![CDATA[<h3>Climbing Mount Citrate</h3>
<p>As we discussed yesterday, the most dramatic innovation yet observed in the <em>E. coli</em> Long Term Evolution Experiment (LTEE) was the ability, acquired by one of the twelve cultures, to use citrate as a carbon source under aerobic conditions. When we <a href="http://biologos.org/blog/evolution-and-the-origin-of-biological-information-part-2-e-coli-vs-id">last discussed</a> the LTEE in 2011, we noted what was known then about the mutations that eventually combined to produce the Cit+ trait: </p>

<blockquote><p>Tracking down the nature of this dramatic change led to some interesting findings. The ability to use citrate as a food source did not arise in a single step, but rather as a series of steps, some of which are separated by thousands of generations:</p>

<ol><li>The first step is a mutation that arose at around generation 20,000. This mutation on its own does not allow the bacteria to use citrate, but without this mutation in place, later generations cannot evolve the ability to use citrate. Lenski and colleagues were careful to determine that this mutation is not simply a mutation that increases the background mutation rate. In other words, a portion of what later becomes “specified information for using citrate” arises thousands of generations before citrate is ever used.</li>
<li>The earliest mutants that can use citrate as a food source do so very, very poorly – once they use up the available glucose, they take a long time to switch over to using citrate. These “early adopters” are a tiny fraction of the overall population. The “specified information for using citrate” at this stage is pretty poor.</li>
<li>Once the (poor) ability to use citrate shows up, other mutations arise that greatly improve this new ability. Soon, bacteria that use citrate dominate the population. The “specified information for using citrate” has now been honed by further mutation and natural selection.</li>
<li>Despite the “takeover”, a fraction of the population unable to use citrate persists as a minority. These cells eke out a living by being “glucose specialists” – they are better at using up glucose rapidly and then going into stasis before the slightly slower citrate-eaters catch up. So, new “specified information to get the glucose quickly before those pesky citrate-eaters do” allows these bacteria to survive. As such, the two lineages in this population have partitioned the available resources and now occupy two different ecological niches in the same environment. As such, they are well on their way to becoming different bacterial species.</li></ol></blockquote>

<p>As such, we noted three distinct steps observed by the Lenski group: steps they call <em>potentiation</em>, <em>actualization</em>, and <em>refinement</em>. <em>Potentiation</em> mutations do not themselves result in the ability to use citrate under aerobic conditions, but they are necessary for it to appear later. <em>Actualization</em> is the mutation that first brings about the Cit+ trait, though, as we noted, this step produced only a very weak Cit+ effect. This nascent ability, however, then undergoes <em>refinement</em> through additional mutations and selection to give the final, robust Cit+ trait observed in the culture.</p>

<p>While some things were known about these steps when the Lenski group last published on this topic (in 2008), the precise details remained unclear. What was needed was a complete characterization of the Cit+ bacteria through whole-genome sequencing to help indentify the changes. These long-awaited results are now available in a <a href="http://www.nature.com/nature/journal/v489/n7417/full/nature11514.html">new paper</a> published last month by the Lenski group, and they shed light on all three stages of the process. </p>

<h3>Lights, camera, actualization</h3>
<p>The key step - and the one of greatest interest - is of course actualization: the mutation that converted a Cit- cell to a Cit+ one. This is also one of the easiest steps to study, since the mutation provides the cell with a new feature that can be detected experimentally. Though <em>E. coli</em> cannot use citrate as a carbon source in the presence of oxygen, they are capable of using citrate in anoxic conditions (i.e. when oxygen is absent). To do so, they employ a protein that imports citrate in to the cell while at the same time exporting a compound called succinate. Since this protein is already present in the <em>E. coli</em> genome, it was long suspected that a genetic regulatory change that turned on its production in the presence of oxygen could be the key innovation that produced the first Cit+ bacterium in the culture. As we discussed <a href="http://biologos.org/blog/behe-lenski-and-the-edge-of-evolution-part-1">yesterday</a>, Behe notes that this change could result from a loss-of-FCT or a gain-of-FCT mutation: </p>

<blockquote>“If the phenotype of the Lenski Cit+ strain is caused by the loss of the activity of a normal genetic regulatory element, such as a repressor binding site or other FCT, it will, of course, be a loss-of-FCT mutation, despite its highly adaptive effects in the presence of citrate. If the phenotype is due to one or more mutations that result in, for example, the addition of a novel genetic regulatory element, gene duplication with sequence divergence, or the gain of a new binding site, then it will be a noteworthy gain-of-FCT mutation.”</blockquote>

<p>Interestingly, the actualization mutation was indeed a change of regulation of the anoxic citrate / succinate transporter, and it arose through a gain-of-FCT mutation. The mutation turned out to be a side-by-side duplication of the citrate / succinate transporter gene, as well as portions of two genes on either side of it. This imprecise duplication placed a partial fusion of these flanking genes next door to one of the copies of the citrate / succinate transporter gene. This brought the copy under the control of promoter sequences derived from of one of its neighbors, a gene that is active when oxygen is present. The resulting product was a copy of the citrate / succinate transporter gene that was now very weakly expressed in aerobic conditions. Since this is an example of a mutation that duplicates a gene and simultaneously creates a new regulatory element for it (causing significant sequence divergence), this is a clear-cut example of a gain-of-FCT mutation. </p>

<h3>Responding to the data</h3>
<p>While Behe has not yet, to my knowledge commented on this particular development within the LTEE, one of his colleagues in the Intelligent Design Movement (IDM), microbiologist Ann Gauger, has offered <a href="http://www.evolutionnews.org/2012/10/innovation_or064701.html">her thoughts</a>. Two themes emerge in her commentary: that the Cit+ trait is “not new”, and that the number of mutations it required  were within the bounds set out by Behe and another member of the IDM, structural biologist Douglas Axe: </p>

<blockquote><p>When is an innovation not an innovation? If by innovation you mean the evolution of something new, a feature not present before, then it would be stretching it to call the trait described by Blount et al. in "Genomic analysis of a key innovation in an experimental Escherichia coli population" an innovation [...]</p>
<p>The total number of mutations postulated for this adaptation is two or three, within the limits proposed for complex adaptations by Axe (2010) and Behe in Edge of Evolution. Because the enabling pre-adaptive mutations could not be identified, though, we don't know whether this was one mutation, a simple step-wise series of adaptive mutations, or a complex adaptation requiring one or two pre-adaptations before the big event.</p>
<p>But does this adaptation constitute a genuine innovation? That depends on the definition of innovation you use. It certainly is an example of reusing existing information in a new context, thus producing a new niche for E. coli in lab cultures. But if the definition of innovation is something genuinely new, such as a new transport molecule or a new enzyme, then no, this adaptation falls short as an innovation. And no one should be surprised.</p></blockquote>

<p>While Gauger does not speak to the tension between her description of the Cit+ mutation as “not genuinely new” and Behe’s criteria that this should be classified as a gain-of-FCT mutation, it is clear that she views this event as within Behe’s “edge” – i.e. within the bounds of “what Darwinism can do.” Additionally, she sees it as falling within the scope of what is evolutionarily possible as proposed by Axe’s work. In the next installment of this series, we’ll revisit how Behe defines his (claimed) limit of what evolutionary processes can accomplish, with this new evidence in hand. In doing so, a careful examination of the potentiation and refinement phases of the Cit+ transition will be informative. </p>

<h3>For further reading: </h3>
<p>Blount, Z.D., Barrick, J.E., Davidson, C.J. and Lenski, R.E. (2012). Genomic analysis of a key innovation in an experimental <em>Escherichia coli</em> population. <em>Nature</em> 489; 513- 518. </p>
<p>Michael J. Behe, <em>The Edge of Evolution: The Search for the Limits of Darwinism</em> (New York: Free Press, 2007).</p>
<p>Michael J. Behe (2010). Experimental evolution, loss-of-function mutations, and “The first rule of adaptive evolution”. <em>The Quarterly Review of Biology</em> 85(4); 419-445. </p>
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        <pubDate>Tue, 23 Oct 12 09:17:13 -0700</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
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        <title>Oxygen and Co&#45;Creation</title>
        <link>http://biologos.org/blog/oxygen&#45;and&#45;co&#45;creation?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/oxygen&#45;and&#45;co&#45;creation?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In the mid&#45;seventeenth century, John Mayow conducted a series of experiments in which he showed that burning candles in bell jars consumed one&#45;fifth of the enclosed air before extinguishing. Remarkably, mice placed in bell jars did exactly the same thing...</description>
        <content:encoded><![CDATA[<p>In the mid-seventeenth century, John Mayow conducted a series of experiments in which he showed that burning candles in bell jars consumed one-fifth of the enclosed air before extinguishing. Remarkably, mice placed in bell jars did exactly the same thing (although the conclusions of these experiments were rather more terminal for the living subjects than for the candles). He concluded that a substance making up 20% of air was necessary for both combustion and respiration. More than a century later, Joseph Priestley showed that a mouse in a closed container would not die if a plant was included. Apparently plants were capable of restoring nitroaerus, which Priestley called &quot;dephlogisticated air,&quot; removed by animals.</p>
<p>In 1774, the French chemist Antoine Lavoisier replicated the relevant experiments in more controlled ways to demonstrate that mass was conserved during combustion. He also renamed the part of the air that burned 'oxyg&egrave;ne.' English scientists resisted the French scientist's new name, not least because the English Priestly had already published his discovery of the gas. 'Oxygen' nonetheless entered the common English vocabulary in part due to one of the first popular science books, <em>The Botanic Garden</em> (1791), which included a poem praising the gas using the preferred French name. By coincidence, this book also promoted some early ideas about biological evolution (specifically, it suggested that sexual reproduction might be important to evolution, which might help to explain the popularity of a book of poems about science). It was written by Erasmus Darwin, the grandfather of Charles Darwin, who first proposed the modern form of the theory of biological evolution in his 1859 book, <em>On the Origin of Species</em>.</p>
<p>150 years later, we are discovering that the lines connecting evolution and oxygen run deeper than the Darwin family tree. We now know, for instance, that for roughly half of the Earth's 4.6-billion-years of history, there was little to no oxygen in the atmosphere. Instead, oxygen entered the atmosphere in two major pulses, with one between 2.4 and 2.2 billion years ago, and another between 0.8 and 0.54 billion years ago. Recent evidence suggests that the first pulse may have actually been the largest event in a series of fits and starts beginning at around 2.7 billion years ago that finally produced a stable low oxygen atmosphere by around 1.8 billion years ago.</p>
<p>Remarkably, both episodes of atmospheric oxygenation happened just before explosions in biological diversity. We have spotty evidence of unicellular eukaryotes (cells with nuclei) before 2.4 billion years ago, but the first fossil evidence for large, diverse eukaryotic communities comes at 1.5 billion years ago. If you are a human, this is part of your history; humans are multicellular eukaryotes descended from one of these early unicellular pioneers. Multicellular animal life is an innovation that seems to have required more oxygen: animals don't appear in the fossil record until about 0.61 billion years ago, toward the end of the second pulse of oxygen.</p>
<p>It is, perhaps, not surprising that major evolutionary events in the eukaryotic family tree, including the origin and diversification of the animals, would be tied to or even driven by major changes in atmospheric oxygen abundance. Eukaryotes generally, and animals specifically, are oxygen lovers. As the subjects of Mayow and Priestly died to prove, we require oxygen for respiration. In general, the larger and more organizationally complex we are (for instance, a human versus a slime mold), the more oxygen we require.</p>
<p>But where did all the oxygen come from? Ultimately, it was produced by the bacterial equivalents of the plants in Joseph Priestley's experiment, a group of photosynthetic microbes called the cyanobacteria. These bacteria are the first and only organisms to have evolved the ability to produce oxygen by photosynthesis. In fact, plants are able to photosynthesize only because their cells harbor descendants of one of the early cyanobacteria. We call them chloroplasts and think of them as little cellular organs, but they are actually the great-great-great... granddaughters of a cyanobacterium that long ago gave up its independence in exchange for the stable environment inside a eukaryotic cell. In any case, photosynthesis is the only known geological process capable of producing oxygen at the rates required for the two pulses of atmospheric oxygenation. The first pulse was probably largely accomplished by cyanobacteria, while the second pulse was probably mostly associated with the cyanobacterial denizens of eukaryotic algae.</p>
<p>What is remarkable about all of this is the extent to which modern life and the atmosphere are products of each other's evolution. The tiniest of photosynthetic organisms played one of the most important roles in shaping the sky, and the sky helped to usher in the age of animals! As a Christian and a geobiologist, I do not believe that this relationship is anticipated or predicted by the Biblical creation accounts.</p>
<p>But then again, why should it have been? The original audience for these accounts would have found concepts like bacteria or even oxygen incomprehensible. The people for whom the Bible was originally addressed thought about origins primarily in terms of ongoing national conflicts and the current human condition. Faced with a variety of violent creation myths that reinforced national conflicts, Genesis said that the universe was created to be good, peaceful, and orderly by one god. It specifically listed things worshipped by other nations as creatures of that god, and in the climax of the creation account, Abraham was called by the same god to be a blessing to all the nations through Israel.</p>
<p>I am not claiming that the Bible cannot be read in a way that can shape us in real and meaningful ways today. In fact, for those who believe that the Bible is inspired, part of the meaning of inspiration has to be that the Bible is God's powerful word to both those with no concept of modern science (most of the world's population, both today and in the past) and to those deeply engaged in its practice. But, and this is a big but, we contemporary Americans read the Bible best when we are sensitive to the assumptions of the original audience, carefully observe how the Bible transformed those assumptions, and look for opportunities to do the same thing with our thinking.</p>
<p>I think that it is important for Christians to reflect on the view of origins that science has given us in light of the thinking evident in the Biblical creation accounts. We have to do this because science gives us a story that is inherently without philosophical or theological meaning; it is up to us to give it meaning by understanding it in relationship with our beliefs. For instance, some see the evolutionary history of life and the Earth and give that history meaning by elevating chance and necessity to the level of prime actors in their own modern creation account. This meaning is not inherent to the theory of evolution; it is supplied by an atheistic belief system external to the theory. I suggest that this view mistakes created things (chance and necessity) for the Creator.</p>
<p>Others have preferred to see the regularity of the universe as the action of an orderly God. This is an old approach to natural theology that was popular among many early scientists, and saw God as responsible for doing such things as maintaining the planets in consistent paths around the sun. Still others look for God in the unexplained. This is a newer approach that sees God as acting primarily in short bursts not explainable by the regular, orderly function of the universe. Looking for God in these ways is a little like trying to capture him in a bell jar, an approach that worked perfectly well with oxygen for Mayow, Priestley, and Lavoisier, but one that is unlikely to impress the Creator described in the Bible.</p>
<p>I prefer to see the same history in the light of a God who desires to share aspects of his nature with his creation, notably including his creativity. Just as he has made humans to be creators (with a little 'c'), he has given the rest of our world the gift of being instrumental in its own creation through the process of evolution. This surely must have been part of what God saw when he described his creation as good! It is my hope that the modern American church can learn to see the goodness of creation in things like the evolutionary history of life and the atmosphere, as well.</p>

<br><p class="intro">This post first appeared in October 2009</p>]]></content:encoded>
        <pubDate>Sat, 13 Oct 12 05:00:52 -0700</pubDate>
        <dc:creator>Mike Tice</dc:creator>
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        <title>Series: Decoding ENCODE</title>
        <link>http://biologos.org/blog/series/decoding&#45;encode&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/decoding&#45;encode&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The BioLogos Foundation explains to the findings of the Encyclopedia of DNA Elements (ENCODE) project and responds to the claims that its discoveries challenge the theory of evolution, especially regarding so&#45;called &quot;junk DNA&quot;.</description>
        <content:encoded><![CDATA[<p>In 2003, under the leadership of BioLogos founder Francis Collins, the Human Genome Project sequenced the full human genome, showing us for the first time the order of the 3.2 billion chemical “bases” that make up the rungs of DNA’s double helix structure. The project identified and mapped 23,000 genes that code for proteins, but those genes make up less than 2% of the total sequence—far fewer than originally predicted, given the complexity of humans. While many non-coding sequences were identified as having function as well, there were still vast swaths of the genome that had no obvious function. In fact, what was known about certain classes of sequences suggested that they had no functional role for humans—such as the sequences identified as either transposons or transposon fragments that make up nearly half of our genome. These sorts of sequences seemed to fit into what was popularly known as the “junk DNA” category. </p>

<p>With the complete genome sequence in hand, we knew the sequence and location of our genes, but what we didn’t know was how all those genes are regulated: how do the trillions of cells in our bodies know when to turn on or off all those genes?  How do the hundreds of distinct cell types develop and function together, when they are all running on the same DNA “operating system?”  </p>
<p>That’s where the ENCODE (short for Encyclopedia of DNA Elements) project comes in. Launched in September 2003, shortly after the announced completion of the Human Genome Project, the goal of the ENCODE project is “to build a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active.” In other words, the project seeks to understand how the genome “works.”</p>

<p>Early this month, researchers from ENCODE released more than thirty papers presenting their findings. During a <em>Science</em> magazine <a href="http://news.sciencemag.org/sciencenow/2012/09/live-chat-figuring-out-what-dna.html">online chat</a>, the project’s data coordinator, Ewan Birney, explained the outcome:</p>

<blockquote>The ENCODE project aimed to start our understanding of how the human genome works. We know that (nearly) all the information that determines a human is in the genome, as we all start off as single cell with this DNA. However, we had a patchy understanding of how it works, in particular away from protein coding genes.<br /><br />

To work out how the genome works, we used the fact there are many tiny machines (proteins and RNA - RNA is very like DNA) in each of our cells which know how to "read" parts of the genome. By monitoring where these little molecular machines are on the genome, or how parts of the DNA are copied into RNA (there are quite a few different types of RNA as well), we start to gain some insight into the genome.<br /><br />

We did many such experiments, across different cell types (eg, one cell type was very similar to a liver cell type; another was very similar to a white blood cell). This way not only can we see what is similar, we can also see differences between these cell types.<br /><br />

There is a lot more to get to know and understand here - this is definitely closer to the start than the end. But it is a substantial amount of data, and analysis, to start on this journey.</blockquote>

<p>According to the abstract of one of the <a href="http://www.nature.com/nature/journal/v489/n7414/full/nature11247.html">lead papers</a> from <em>Nature</em>, this extraordinary glut of data “enabled us to assign biochemical functions for 80% of the genome, in particular outside of the well-studied protein-coding regions.”  Only 2% of the genome codes for proteins, but 80% or more has <em>some</em> biochemical function.  As a <em>Science</em> <a href="http://www.sciencemag.org/content/337/6099/1159">news article</a> put it, these 30 papers “sound the death knell for the idea that our DNA is mostly littered with useless bases.”</p>

<p>The pro-Intelligent Design organization The Discovery Institute has heralded the discovery as the “demise of junk DNA.”  Casey Luskin writes for their <a href="http://www.evolutionnews.org/2012/09/junk_no_more_en_1064001.html">blog</a> <em>Evolution News</em>:</p>

<blockquote>Let's simply observe that it provides a stunning vindication of the prediction of intelligent design that the genome will turn out to have mass functionality for so-called "junk" DNA. ENCODE researchers use words like "surprising" or "unprecedented." They talk about of how "human DNA is a lot more active than we expected." But under an intelligent design paradigm, none of this is surprising. In fact, it is exactly what ID predicted.</blockquote>

<p>The extent to which the ENCODE project been able to identify function has been surprising—even exhilarating—though scientists have for some time been getting glimpses of the many ways in which segments of DNA can be “active.”  Even in 1970 biologists knew that some non-coding DNA had function, and by 2003 there was a large body of work demonstrating that many non-coding elements acted as promoters, enhancers, insulators, and so on. Indeed, in recent years many have come to appreciate the fact that “junk” was never really an appropriate metaphor in the first place.   Still, because sequencing of multiple genomes has shed such extraordinary light on key evolutionary mechanisms, many geneticists have focused on function primarily in terms of which regions do or do not contribute to the evolutionary fitness of their host, rather than whether they were merely "doing something" biochemically.  What the impressive ENCODE project has done is open a treasure trove of new information that can only accelerate the pace at which researchers are able to explore the incredible subtlety and complexity of DNA, and refine the very concept of “functionality.” </p>

<p>So with all this in mind, is ENCODE a stunning victory for ID, as Luskin believes? Bryan College biologist Todd Wood thinks not.  He <a href="http://toddcwood.blogspot.co.uk/2012/09/everyones-excited-about-encode.html">writes</a>, “I don't think that function equates to design, nor do I think that design requires or predicts function.  They're not the same thing… my understanding of function does not require me to hypothesize God (or an anonymous designer, if you must) as the proximal cause.”  </p>

<p>We agree.  Indeed we would go on to say that evolution and design are not mutually exclusive.  So while finding function is not sufficient to prove design, recognizing that function has arisen by way of evolution does not indicate that God was not at work.  We at BioLogos believe God providentially works out his purposes—his designs—<em>through</em> the elegant processes of evolution, not in opposition to them.</p>

<p>Amazing as the new data are, it only strengthens and enhances our evidence for evolution.  While much of the genome is “doing something” biochemically, it is still likely that the majority of the sequence is evolutionarily neutral (Senior Fellow Dennis Venema discusses the evidence for this “neutrality” in a <a href="http://biologos.org/blog/understanding-evolution-is-there-junk-in-your-genome-part-1">post</a> on our site, including a striking comparison between 29 different mammal genomes and the human genome).  In fact, another  ENCODE researcher participating in the <em>Science</em> magazine chat, John A. Stamatoyannopoulos of the University of Washington School of Medicine, thinks the findings align beautifully with evolutionary theory:
</p>

<blockquote>ENCODE's data provide a unique and powerful window through which to view evolutionary change. We can see those changes directly by lining up the genome sequences of many different organisms -- these line-ups have revealed millions of regions where all the genomes agree, indicating sequences that have been specially preserved by evolution while others have decayed away (ie freely changed their letter codes). We now see that a large proportion of these 'conserved' regions are lighted up by ENCODE annotations, indicating that they are marking spots in the genome that contain important instructions for cell function.</blockquote>

<p>We’ve discussed “junk” DNA previously, including a multi-part series by Dennis Venema, and we’ve received many emails over the past few days asking for our comments on the ENCODE findings. On Monday and Tuesday, Dr. Venema will begin to offer his own thoughts on ENCODE.</p>

<p class="intro">A special thanks goes to Darrel Falk, Mark Sprinkle, Kathryn Applegate, Dennis Venema, and Tom Burnett for their contributions to this post.</p>]]></content:encoded>
        <pubDate>Wed, 26 Sep 12 05:00:35 -0700</pubDate>
        <dc:creator>Stephen Mapes, Dennis Venema</dc:creator>
        <!--<dc:date>Sep 26, 2012 05:00</dc:date>-->
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        <title>Series: Recent Discoveries in Astronomy</title>
        <link>http://biologos.org/blog/series/recent&#45;discoveries&#45;in&#45;astronomy?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/recent&#45;discoveries&#45;in&#45;astronomy?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this excerpt from the book Delight in Creation: Scientists Share Their Work with the Church, astronomer Deborah Haarsma shares her excitement about recent findings about our universe from a Christian perspective.</description>
        <content:encoded><![CDATA[<p>A passenger settles in beside me on the airplane. We chat a bit about our destinations, and then comes the inevitable question: “So, what do you do for a living?” I pause a moment before answering. If I answer “astronomy,” I know my fellow passenger will perk up, comment that he has always loved stars, and ask a question about a comet or planet that’s been in the news. If I answer “physics,” he will shrink back, comment that he didn’t do well in physics in high school, and the conversation will quickly come to an end. My professional colleagues have noticed the same thing. We joke that if you want to sleep on the plane, just answer, “Physics!”</p>

<p>It’s true that physics sounds scary to many people, and it can indeed be a difficult topic to learn. Yet I’ve always loved physics (my degrees are in physics rather than astronomy), because of the way that mathematical equations can describe and predict so much of what we see in the world around us. One reason I got into astrophysics is because the universe contains so many bizarre situations that we can’t reproduce on earth, like ultracold, or extremely high density, or extremely high magnetic fields. It’s a fun challenge to figure out which physical process will be the most important when the situation is so dissimilar to everyday experience. But if the word “physics” makes you shrink in distaste or fear, don’t worry. For the rest of this article, we’ll focus on a more friendly topic: astronomy.</p>

<p>In the last decade or two, our knowledge of the universe has grown dramatically as many new telescopes and spacecraft have come online. In this essay, I’ve selected some of my favorite recent astronomy photographs to share with you. As a professional astronomer and a Christian, I feel God has called me to share these wonders with the Church. Many times, these new discoveries are presented without any mention of God, and sometimes in a context of overt atheism. I want to share these things with you in a Christian context, with God as their creator.</p>

<h3>The Milky Way</h3>
<p>Have you ever seen the Milky Way? If you live in a rural area, you may have seen it many times. If not, it may have been a dramatic surprise when you first saw it while camping or traveling. On a clear night out in the country, the sky is strewn with brilliant stars—many more stars than you can see under city lights.The faintest stars form a creamy, smoky band from horizon to horizon. Our galaxy contains billions of stars, and thousands of those stars are visible to the naked eye. The stars appear in a band across the sky because we are viewing our galaxy edge-on, like looking at the edge of a dinner plate.</p>

<p>When David looked up at the night sky over Israel thousands of years ago, he may have seen the Milky Way, or a comet, or simply the brilliance of the full moon. Whatever the sky looked like that night, it inspired him to sing:</p>

<blockquote>The heavens declare the glory of God; the skies proclaim the work of his hands.
Day after day they pour forth speech; night after night they reveal knowledge.
They have no speech, they use no words; no sound is heard from them.
Yet their voice goes out into all the earth, their words to the ends of the world. (Ps. 19:1-4a)</blockquote>

<p>The heavens are displaying the glory of God for all people to hear, proclaiming their message to people of every language, tribe, and nation. Just about anyone who looks up at the night sky feels a sense of wonder. Yet as Christians, we feel more than a vague sense of awe; we know the Creator of the heavens personally, as our own loving Father.</p>

<p>The heavens declare more than God’s glory. The universe is God’s revelation of himself to us, and teaches us about his character. As the Belgic Confession says about “The Means by Which We Know God,”</p>

<blockquote>We know him by two means: First, by the creation, preservation, and government of the universe, since that universe is before our eyes like a beautiful book in which all creatures, great and small, are as letters to make us ponder the invisible things of God: his eternal power and his divinity, as the apostle Paul says in Romans 1:20. Second, he makes himself known to us more openly by his holy and divine Word, as much as we need in this life, for his glory and for the salvation of his own. (Article 2)</blockquote>

<p>The natural world teaches us about God’s glory, power, divinity, faithfulness, extravagance, immensity, love, and other attributes. God’s special revelation in scripture is our primary place to learn of God’s character (Ps. 19 goes on to talk about special revelation in vs. 7), but the natural world can bring the message to our senses in a powerful way beyond mere words on a page. The Holy Spirit can use the natural world to get the message past our hardened or weary hearts. Nature illustrates these attributes in ways that enlarge our imaginations to appreciate afresh the glory of God.</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/milkyway_570.jpg" alt="" height="850" width="570"  /></p>

<h3>The Sun</h3>
<p>The Solar Dynamics Observatory was launched into space in 2010, the latest of several spacecraft to photograph the sun in detail. In Figure 2, the upper photo shows the face of the sun with a sprinkling of sunspots. The sun is powered by nuclear fusion reactions deep in its core which heat the hydrogen and helium gas till it glows. A sunspot is a place on the sun’s surface where the gasses are a bit cooler than the surrounding area, so that it glows less brightly and appears dark.</p>

<p>The lower photo in Figure 2 was taken the same day, but in X-ray light. X-rays are invisible to our eyes, but you have experienced them at the dentist’s office. There, the X-rays are produced by a machine, travel through the mouth, and are detected by film to reveal an image of your teeth. In this image, X-rays are produced by the sun, travel to the Solar Dynamics Observatory, and are detected by a camera to show an image of the sun. In X-rays, the sunspots are the <em>brightest</em> part of the image, not the faintest. If you look at the sunspot on the left edge, you can see bands of particles rising out of the sunspot in a looping path above the sun’s surface and falling back down on it. As the particles follow lines of magnetic field, they emit X-rays. The loops you see are not small—they are about the size of planet Earth! Because of modern spacecraft, telescopes, and cameras, we can see so much more in the heavens than what is visible to the naked eye. Thus, we are seeing more of what the heavens have to declare about God. In Psalm 19, David goes on to describe the sun:</p>

<blockquote>In the heavens God has pitched a tent for the sun. It is like a bridegroom coming out of his chamber,
like a champion rejoicing to run his course. It rises at one end of the heavens
and makes its circuit to the other; nothing is deprived of its warmth. (vs. 4b-6)</blockquote>

<p>If David had lived today, maybe he would have written about other properties of the sun, like the power of God as seen in nuclear reactions and looping magnetic fields. As it is, he makes two important points. One is the universal warmth of the sun, by which God provides for all life on earth. The other is the faithful path of the sun, day after day, unchanging year after year. In the book of Jeremiah, God promises his people that he will not break his covenant with them, any more than he would break his covenant with day and night and the fixed laws of heaven and earth (33:19-26). The sun is a persistent reminder, woven into our lives, of God’s faithfulness to his promises.</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/sun_570.jpg" alt="" height="853" width="557"  /></p>
]]></content:encoded>
        <pubDate>Fri, 21 Sep 12 04:00:01 -0700</pubDate>
        <dc:creator>Deborah Haarsma</dc:creator>
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        <title>Science, Christianity, and Homeschooling</title>
        <link>http://biologos.org/blog/science&#45;christianity&#45;and&#45;homeschooling?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/science&#45;christianity&#45;and&#45;homeschooling?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Resilient learners and a robust faith can handle challenges. But the faith of the students my professor described was different— strong, but brittle; it did not have the resilience that comes through testing.</description>
        <content:encoded><![CDATA[<p>Science and technology dominate the world of young people. Not only do teenagers seem to live their lives through their smart phones and Facebook pages, but our culture’s view of science has affected their understanding of truth. Often, “scientific truth” is more real to them than “religious truth”—and if the two should seem to conflict, more often than not, science wins. Perhaps turned off by the “conflict mentality” that they perceive in the church, and by the church's inability to relate Christianity to the world around them, many of those young people leave the faith. </p>


<p>Parents, youth leaders, teachers—all of us—need to encourage young people to have a passion for God’s world and God’s Word. We should help them learn to distinguish between primary issues of the faith, and secondary issues that Christians may in good conscience disagree on.  And we must equip them to think critically and biblically through the many different issues of science and faith so that they can be effective citizens and witnesses in today’s society.  Today I’d like to introduce a new resource for the Church in that equipping mission for today’s Christian young people; but first, let me give a bit of my own story.</p>

<h3>Prepared for the conflict</h3>


<p>My amazing parents homeschooled me through eighth grade. I loved the freedom to explore things that I enjoyed; the challenge of tackling subjects well beyond my “official” grade level; and the joy of forming deep relationships with my parents and brothers. We used many high-quality science texts, but in my memory, all of the resources on origins available to us promoted an often-combative Creation Science perspective. </p>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/a_mcfarthing_bio_new.jpg" alt="" height="270" width="200"  /></p>

<p>In ninth grade, I went to public high school armed and ready for the fight I had been trained to expect. When my biology teacher taught evolution and required us to write an essay, I hi-jacked the essay topic and turned it into an apologetic for six-day creation. Because I was in “conflict mode,” I was not ready to consider the arguments for evolution, or the possibility that Christians could actually accept it. I stayed on guard for the next three years until I headed off to the less hostile territory of Wheaton College.</p>

<p>As a student in Wheaton’s explicitly Christian environment, I felt a new safety to explore different biblically faithful positions that Christians hold, while at the same time maintaining my commitment to my faith. I majored in English and Secondary Education, and as one of my science requirements I took a class called “Issues in Biology.” My professor’s Christian faith shone through her teaching, and her words have stayed with me to this day: “Jesus is not going to be standing at the gateway of heaven,” she said, “holding a clipboard in his hand and asking, ‘Did you believe in six-day creation? Did you believe in evolution?’ He’s going to be asking the one question that matters: ‘Did you believe in ME?’” <em>Yes!</em> I thought. <em>I agree.</em> My professor then proceeded to surprise me: she was the first person to clearly articulate for me how someone could both believe the Bible and accept evolution. I realized that this— alongside many others—was a secondary issue, and that whatever my position on origins might be, I could have fellowship with Christians who held different positions.</p>

<p>But this particular biology professor had more to say than, “we can all just get along.” I remember her bemoaning a phenomenon that she had observed as a teacher: Christian students, raised in a strict Young Earth Creationist background which only portrayed the weaknesses in evolution, would often lose their faith when confronted with evolutionary theory in its full strength. Having only ever heard one perspective, they hadn’t learned to think critically through different viewpoints. Furthermore, they identified their faith so strongly with Young Earth Creationism, that when science seemed to contradict their understanding of origins, they felt they had to jettison not only their Creationism, but the whole of their Christian faith. </p>

<p>During my training as a high school teacher, I learned another way to understand what was happening in the minds (and lives) of these students using Piaget’s theory of cognitive equilibrium. In simplified form, the theory says that students have a mental construct of how they see the world (called a schema by Piaget); with this schema, they are happy and peaceful—in a state of equilibrium. When they encounter new information, however, they get pushed into an uncomfortable state of disequilibrium. In order to return to equilibrium, they must either assimilate the new information into their existing worldview, or they must accommodate their worldview to fit the new information.  Resilient learners and a robust faith can handle such challenges.</p>

<p>But the faith of the students my professor described was different— strong, but brittle; it did not have the resilience that comes through testing. Indeed, in 1644, John Milton described such untested conviction like this: “<em>I cannot praise a fugitive and cloistered virtue, unexercised and unbreathed, that never sallies out and sees her adversary, but slinks out of the race where that immortal garland is to be run for...</em>” (from <em>Areopagitica: A speech for the Liberty of Unlicensed Printing to the Parliament of England</em>). To use Piaget’s terms again, evolution threw these students into a disequilibrium from which they could not recover; they could not assimilate evolution into their Creationist worldview, and they could not or would not accommodate their worldview to fit the scientific evidence—so they floundered. </p>

<h3>Training for resilience</h3>
<p>In my own roles as a teacher and youth leader, I strive to introduce young people to new ideas that will stretch them—even cause them to lose their equilibrium at first.  Too much new information conflicting with students’ pre-existing ideas will mean that they cannot assimilate the new information or accommodate to it. Too little new information will mean that they are not being challenged. Both extremes mean that the student is not learning. What I aim to do is to push them into disequilibrium, but also then provide them with the tools to assimilate/accommodate for themselves, and reach equilibrium again—with a deeper, enriched, and more nuanced worldview.</p>

<p>While this has been my strategy to personally help train up resilient young Christians in classrooms and youth groups, last year, Dr. Ruth Bancewicz (the <em>Test of FAITH</em> Project Leader, contributor to this blog, and fellow member of City Church Cambridge) brought me on board to work on another exciting project.  Since then, I have been able to use my passion to provoke young people to think more deeply in my role as author of the <em>Test of FAITH</em> homeschool material. </p>

<p>As it was when I was a homeschooled student myself, the vast majority of homeschool science resources available today focus on the issue of origins, and from a Young Earth Creationist perspective. We have developed the <em>Test of FAITH</em> homeschool course to allow young people to learn about the different perspectives that Christians hold on a wide range of issues.  In fact, let me emphasize that less than one-third of this material is about origins! For my part, I have loved the opportunity to delve into other issues of science and faith while developing this course; we think students will also appreciate seeing how a biblical worldview engages with such diverse topics as cosmology, the environment, neurology and the soul, free will and determinism, and bioethics. </p>
 
<p>Both the broad range of issues addressed in the <em>Test of FAITH</em> curriculum and the approach this curriculum takes to those topics will benefit students in several specific ways:</p>

<ul><li>Learning about different viewpoints will encourage homeschoolers to think critically through ideas and their consequences.</li>
<li>Coming in contact with a variety of views will cause students to question why they believe what they believe, and will give them th tools to emerge from that questioning with an even deeper faith in God.</li>
<li>Showing that Christians can disagree on various secondary issues, yet still remain committed, Bible-based believers, will help diffuse the acrimony that often surrounds science-faith issues.</li></ul>

<p>I still have many questions, and I feel that my journey in understanding how science relates to my faith has just begun. However, <em>Test of FAITH</em> has been a significant marker on my own path, and I hope it will be a milestone for many homeschoolers around the globe, as well.</p>

<p class="intro"><em>Science and Christianity: An Introductory Course for Homeschoolers</em> is available for free download at <a href="http://www.testoffaith.com/homeschool">www.testoffaith.com/homeschool</a>. The 3-8 week course is designed for use with the award-winning documentary <em>Test of FAITH: Does science threaten belief in God?</em><br /><br />
Ten free <em>Test of FAITH</em> DVD’s are available to homeschooling Biologos supporters! Contact <a href="mailto:abigail@testoffaith.com">abigail@testoffaith.com</a> to reserve your copy.</p>]]></content:encoded>
        <pubDate>Tue, 18 Sep 12 05:00:48 -0700</pubDate>
        <dc:creator>Abigail McFarthing</dc:creator>
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        <title>Series: Biblical and Scientific Shortcomings of Flood Geology</title>
        <link>http://biologos.org/blog/series/biblical&#45;and&#45;scientific&#45;shortcomings&#45;of&#45;flood&#45;geology?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/biblical&#45;and&#45;scientific&#45;shortcomings&#45;of&#45;flood&#45;geology?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Gregg Davidson and Ken Wolgemuth seek to remove the stumbling block of the Genesis flood in this four part series. Though many believe in an ancient world&#45;wide flood, the evidence given does not hold up to geological scrutiny, but points rather to something regional instead. It is their hope that Christians will not walk away from faith in Christ simply because a global flood is not supported by science. Looking at natural phenomena like the Grand Canyon, salt beds, and fossil deposits, they reveal reasons for these deposits and structures while showing that their origin did not stem from a violent flood that covered the planet.</description>
        <content:encoded><![CDATA[<p class="intro">This is the first in a four part series taken from Gregg Davidson and Ken Wolgemuth's <a href="http://biologos.org/uploads/projects/davidson_wolgemuth_scholarly_essay.pdf" target="_blank">scholarly essay</a> "Christian Geologists on Noah’s Flood: Biblical and Scientific Shortcomings of Flood Geology".</p>

<p>As Christians and geologists, we frequently encounter people with stories of storm tossed and shipwrecked faith that started when they began to wrestle with apparent conflicts between science and the Bible.  The stories have a common thread. The Bible, they were told, clearly teaches the earth was created a few thousand years ago with life forms fashioned more or less as we find them today. Because the earth is very young, the incredibly complex sequence of rock, sediment, and fossils found on our planet must have been deposited in a very short period of time. Noah’s Flood, as the only plausible causal agent, was obviously a global and violent event.  Theories of an ancient earth and adaptation of life forms, they were further informed, have been constructed on flimsy evidence created by atheistic scientists searching for ways to expunge God from modern culture. But as these sojourners began to explore and understand the actual evidence for an ancient earth, they found themselves increasingly convinced of its legitimacy, and thereby increasingly questioning the veracity of their faith – many to the point of relegating Christ to just another wishful myth.</p>

<p>It is our conviction that these stories of strained or lost faith derive not from an inherent unwillingness to trust the Bible, but rather from misguided teaching on the message of Scripture. Those insisting the earth is young are not simply putting their faith in God’s Word, they are putting their faith in their own particular interpretation of that Word. As such, an entirely unnecessary stumbling block to faith is created, where faith in Christ first requires rejection of sound science.</p>

<p>As we have prayed and studied this subject, we have felt God’s call to speak out against this misplaced stumbling block. We are sensitive, however, to the fact that when scientists speak on issues of faith, there is a natural suspicion that science will be regarded as the ultimate arbiter of truth, and Scripture will have to yield whenever conflict arises. It is thus important for us to state here that both of us ascribe to the authority and inspiration of Scripture, the reality and necessity of Christ’s death and resurrection, the existence of genuine miraculous events, and the truthfulness of the Biblical historical narratives. In our understanding, science will never trump Scripture, but by virtue of science being a study of God’s natural creation, it may occasionally assist in our understanding of God’s written Word. Where this has occurred historically and has been accepted by the Church, the invariable result has been the abandonment of an interpretation of some secondary importance, without any change in our understanding of the intended central message.</p>

<p>This phenomenon is illustrated well by the 17th century clash between Galileo’s claims that the earth revolves around the sun, and the multiple passages in Scripture that appear to clearly present a static earth as the physical center of God’s natural creation. The Bible tells us repeatedly that the earth is fixed upon its foundations (Ps 93:1, 104:5) and the sun rises and sets (Eccl 1:5, Ps 19:6).  Within the context of the historical narratives (which we are not accustomed to interpreting in any figurative manner) we read statements about “the sun rising over the land” (Gen 19:23), and a miraculous event during a famous battle where “the sun stopped in the middle of the sky and delayed going down a full day” (Josh 10:13). Likewise in the Levitical law, we find commands to complete the Passover sacrifice “when the sun goes down” (Deut 16:6).</p>

<p>God’s people had interpreted these verses for thousands of years to be authoritative statements about both spiritual and physical realms, and 17th century believers understandably struggled with allowing science to alter traditional interpretations. If God says the sun rises and the sun sets, how could it be otherwise?</p>

<p>Fast forward a few centuries, and we are now somehow quite content to have allowed science to alter our thinking on these verses, without abandoning notions of inerrancy or inspiration. The reason is simply because it was eventually recognized that the primary message of these verses was never on the nature of nature, but on the nature of man and his experience with his environment and his God. Solomon and Joshua accurately recorded their experience from an earthly perspective (sun rising and setting), and David praised God for holding the earth fixedly in His hand (Ps 93:1, 104:5), without requiring a meaning of fixity in space. The central message of these verses was apparent to readers before and after Galileo. Only a secondary interpretation, likely never intended by the writers, was cast off after scientific advances.</p>

<p>So what is the issue regarding Noah’s Flood? The modern debate centers around two questions. Was it truly global in extent, and can the Flood account for the earth’s complex geologic record?  To address the first, it is worth being reminded of the Apostle Paul’s letter to the church in Rome where he makes a statement that “your faith is being proclaimed throughout the whole world” (Rom 1:8). Entire people groups existed at this time in China, Australia, and North and South America who knew nothing of the church in Rome. Though using wording that literally means the entire world population, Paul is clearly referring to the world known to him and his readers at the time.<sup>1</sup>  Paul speaks truthfully from his experience. Allowing for the possibility that Noah’s Flood encompassed all of known humanity without necessarily covering the entire planet is thus consistent with how other passages in Scripture are interpreted by Christians who believe the Bible is authoritative and trustworthy.</p>

<p>Our primary interest in this blog series is the second question, the widely promulgated notion that the Flood can account for the earth’s complex geology, and that all genuine Christians should accept this viewpoint.</p>

<h3>Notes</h3>
<p class="date">1. Many Biblical scholars define a <em>literal</em> interpretation as one that takes into account the literary genre, figures of speech, context, and author/audience perspective in deriving the intended meaning. By this definition, poetry and allegory are <em>literally</em> interpreted as <em>figurative</em>. In this blog and in our article, our use of <em>literal</em> conforms to its more common definition where a literal interpretation is one that adheres to the precise definition of words without figurative meaning and without requiring additional context to understand.</p>]]></content:encoded>
        <pubDate>Mon, 17 Sep 12 05:41:28 -0700</pubDate>
        <dc:creator>Gregg Davidson, Wolgemuth, Ken</dc:creator>
        <!--<dc:date>Sep 17, 2012 05:41</dc:date>-->
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        <title>Using Film to Catalyze Conversations on Faith and Science</title>
        <link>http://biologos.org/blog/using&#45;film&#45;to&#45;catalyze&#45;conversations&#45;on&#45;faith&#45;and&#45;science?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/using&#45;film&#45;to&#45;catalyze&#45;conversations&#45;on&#45;faith&#45;and&#45;science?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>What are the best ways to spark productive conversations about science and faith? Certainly there are books, articles, blogs (like this one), and podcasts. But there are particular advantages to using film.</description>
        <content:encoded><![CDATA[<p>Like many other Christians who are scientists, I hope for healthy and robust conversations about science and Christian faith. How can we inform and stimulate such conversations on campuses among students, faculty and staff, or at our churches? These are essentially cross-cultural interactions, and often do not come easily. Yet there is much to be gained by crossing the barriers erected at the science-faith interface. </p>

<p>What are the best ways to spark productive conversations about science and faith? Certainly there are books, articles, blogs (like this one), and podcasts. Or we can host major events with a prominent speaker or panel. These are all good things, to be sure. But there are particular advantages to using film. Unlike books, articles, blogs, or podcasts, videos engage with both sight and sound. A single DVD is much less expensive than a dozen copies of a book for a group to read through together. A film is portable, flexible, quick, and easy to use. Participants don't need to prepare between sessions, nor do they require internet access. And you don't need to find a big-name speaker or organize a large-scale event.</p>

<h3>Test of Faith</h3><br>

<p class="caption-center"><iframe width="560" height="315" src="http://www.youtube.com/embed/vO1wcYKe99Q" frameborder="0" allowfullscreen></iframe></p><br>

<p>Unlike years ago, there are now high-quality and stimulating science-faith documentaries that are well-suited for engaging groups and stimulating conversations. The Faraday Institute for Science and Religion, based in Cambridge, UK, has put together an award-winning documentary, <em><strong>Test of Faith: Does Science Threaten Belief in God?</strong></em> This 2009 film is divided into three distinct 30-minute sessions, which can be further divided if desired. A wide range of topics are considered, including the age and origin of the universe, the possibility of other universes, evolution, care for the environment, the brain, free will, and bioethics. The trailer can be seen above. This film is a good choice if you are not looking to focus primarily on issues around biological evolution. It is also particularly well-suited for groups that include both skeptics and Christians, as one could imagine it being shown on a public television station such as PBS or BBC. Faraday now has quite a range of supporting materials around the film, including bonus footage, a rich website, a leader’s guide, a study guide for participants, and a book with autobiographical contributions from scientist-believers, <em>Test of Faith: Spiritual Journeys with Scientists</em>. Contributors to the film and book include Francis Collins, Alister McGrath, Ard Louis, Jennifer Wiseman, Bill Newsome, John Polkinghorne, Alasdair Coles, Rosalind Picard, and John Bryant.</p>

<h3>From the Dust</h3><br>

<p class="caption-center"><iframe src="http://player.vimeo.com/video/23533521?title=0&amp;byline=0&amp;portrait=0" width="570" height="321" frameborder="0" webkitAllowFullScreen mozallowfullscreen allowFullScreen></iframe></p>

<p>Just this year, BioLogos partnered with Highway Media to produce a new documentary, <strong><em>From the Dust: Conversations in Creation</em></strong>. This film is just over an hour long, and is divided into four sections of similar length: “Faith and Science,” “Divinely Inspired,” “The Conversation,” and “Truly Human.” Some early clips from the film (prior to the final round of editing) and additional footage can be found in the <a href="http://biologos.org/resources/multimedia" (target="_blank") >multimedia resources</a> section of the BioLogos website, and the trailer is above. <em>From the Dust</em> has a firm focus on Genesis, creation, and evolution, probably the area of the most significant tension in our society today related to science and faith. Unlike <em>Test of Faith</em>, there is no narrative voice in From the Dust, and contrasting views are held in tension. It also focuses on theology more than science, so <em>From the Dust</em> may be a better choice than <em>Test of Faith</em> for some groups of Christians. While the <em>Test of Faith</em> film has a very modern and logical structure to it, <em>From the Dust</em> has more of a personal and emotional feel, and you feel that the people in the film are talking <em>with</em> you more than just talking <em>to</em> you. You see the cost that divisive positions on creation and evolution can have on Christians, even in the college classroom. While the film has a strong leaning towards evolutionary creationism and features N. T. Wright, John Walton, John Polkinghorne, Alister McGrath, Peter Enns, Jeff Schloss and Rick Colling, there are also significant contrasting voices from Answers in Genesis and Canopy Ministries. In my opinion, <em>From the Dust</em> is a good choice for many churches, small group Bible studies, or Christian student groups (e.g., InterVarsity, Navigators) to use. There are fewer supporting materials around <em>From the Dust</em>, due both to its new release and also its more inductive approach than that of the Faraday project. In addition to bonus footage, there is a <a href="http://fromthedustmovie.org/">website</a>, a list of sample discussion questions, and a <a href="http://biologos.org/uploads/static-content/From-the-Dust-Study-Guide.pdf" >group study guide</a> that I developed.</p>

<h3>Next Steps</h3>

<p>As you decide which film to use for starting conversations and how to use it, there are several things to consider. Will you show the whole film at once, or will you spread it out over several sessions? Will you provide additional structure or just have an open discussion after each viewing? How many days do you have available? How much time at each session? What are the worldviews of your audience? What is their level of biblical, theological, and scientific knowledge? How big is the group, and what is their age? What is their willingness to do homework and their level of interest in the topic? Is this a new group specifically convened to explore science and faith issues together, or is this a preexisting group that has been doing other things together and has varying levels of commitment to this new topic? What sort of expertise does the leader of the group have, or are there multiple leaders? All of these can affect the group dynamic and may influence the choices you make.</p>

<p>The groups I have worked with have been Christian students from secular colleges, Christian faculty and staff from secular colleges, a small group Bible study, and a general audience. I have found that <em>Test of Faith</em> worked well over three weeks with my Bible study group and with the faculty and staff group, though in these exclusively Christian groups I needed to add a bit of scripture, song or prayer in those settings (as is also recommended in the Faraday materials). The film was particularly good for a 30-minute screening at the general audience event, which also featured a panel for Q&A afterwards. It could likely be used in a college classroom, too, even at a secular institution. I had been considering strategies for using <em>Test of Faith</em> at my church as well, until I found <em>From the Dust</em>.</p>

<p>As I began thinking about ways to use <em>From the Dust</em> while it was still in the final editing stages, I screened it in two parts to three of the four audiences mentioned above (not the general audience). I asked several dozen undergraduates from local InterVarsity groups to give me their responses to the film and to tell me what questions it makes them want to explore more. I did the same with the Christian faculty and staff, and with my home Bible study group. Then I assembled a six-week curriculum (plus an opening session on setting expectations and sharing my vision), primarily aimed at Christian undergraduates. My students this summer loved it so much that we followed it with three-weeks on <em>Test of Faith</em>! Now I keep getting asked when I’ll do it next. But I am hoping that others, even my own students, will want to lead discussion groups like this. You don’t have to be an expert to start a conversation, and sometimes being a leader is the best way to learn.</p><br> </br>]]></content:encoded>
        <pubDate>Thu, 13 Sep 12 06:31:09 -0700</pubDate>
        <dc:creator>David Vosburg</dc:creator>
        <!--<dc:date>Sep 13, 2012 06:31</dc:date>-->
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        <title>Science and the Bible: Theistic Evolution, Part 3</title>
        <link>http://biologos.org/blog/science&#45;and&#45;the&#45;bible&#45;theistic&#45;evolution&#45;part&#45;3?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/science&#45;and&#45;the&#45;bible&#45;theistic&#45;evolution&#45;part&#45;3?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>As I stressed in my column about the YEC view, creationism is ultimately about theodicy—it’s not only about theodicy, to be sure, but the belief that animals must not have suffered and died before Adam and Eve committed the first sin is crucial to the “young” in Young Earth Creationism. To a significant degree, Theistic Evolution is also about theodicy.</description>
        <content:encoded><![CDATA[<p>Last time, I presented three implications and conclusions concerning Theistic Evolution. There is much more to say about this, so we continue the same thread—and we will pick it up yet again in two weeks, coming back once more for an historical look in about a month.</p>
 
<h3>Some implications and conclusions of Theistic Evolution--continued</h3>
<p><strong>(4) Several leading TEs have advanced a strongly Christocentric theology of creation—stressing the idea (from the prologue of John’s gospel) that the Maker of heaven and earth is the <em>crucified and resurrected</em> second person of the Trinity. Especially when theodicy is the topic, they like to speak about “the crucified God,” or “the theology of the cross,” or “divine kenosis.”</strong></p>

<p>On first glance, some readers might be a bit perplexed: isn’t this column supposed to be about evolution, not the crucifixion? What could those topics possibly have in common? The answer lies in theodicy, or the problem of evil and suffering in the world. As I stressed in my column about the <a href="http://biologos.org/blog/science-and-the-bible-scientific-creationism-part-1">YEC view</a>, creationism is ultimately about theodicy—it’s not <em>only</em> about theodicy, to be sure, but the belief that animals must not have suffered and died before Adam and Eve committed the first sin is crucial to the “young” in Young Earth Creationism.  To a significant degree, Theistic Evolution is <em>also</em> about theodicy. In one of the best books on science and religion that I could name, Catholic theologian <a href="http://woodstock.georgetown.edu/fellows/john-haught.html">John Haught</a> explains the atheist’s view of theodicy (which he does not share) as follows: </p>

<blockquote><p>“Evolution is incompatible with any and all religious interpretations of the cosmos, not just with Christian fundamentalism. The prevalence of chance variations, which today are called genetic ‘mutations,’ definitively refutes the idea of any ordering deity. The fact of struggle and waste in evolution decisively demonstrates that the cosmos is not cared for by a loving God. And the fact of natural selection is a clear signal of the loveless impersonality of the universe.” (<a href="http://www.amazon.com/gp/product/0809136066/ref=as_li_ss_tl?ie=UTF8&camp=1789&creative=390957&creativeASIN=0809136066&linkCode=as2&tag=thebiofou06-20">Science and Religion: From Conflict to Conversation</a><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=0809136066" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" />, p. 52) </p></blockquote>

<p>Proponents of TE have responded to the issues raised in the latter two sentences in a variety of ways. I agree with Christopher Southgate’s analysis of the overall situation. Like several of the writers I mention this week, <a href="http://humanities.exeter.ac.uk/theology/staff/southgate/">Southgate</a> is a theologian with a doctorate in science; he’s also an accomplished poet. The text he wrote with many others, <a href="http://www.continuumbooks.com/books/detail.aspx?BookId=159509&SubjectId=1080&Subject2Id=1743">God, Humanity and the Cosmos: A Textbook in Science and Religion</a>, is really much more than a textbook. I recommend it for anyone seeking a wide-ranging introduction to the principal issues. </p>

<p>Southgate and his collaborators see just two “possible theologies of divine action in respect of evolution,” considering that “the problems of theodicy <em>are</em> severe.” Option ONE: “to posit God merely as the passive, suffering companion of every creature, a view self-consistent but dubiously faithful to the Christian tradition.” Option TWO: “to mount a defence of teleological creation using a <em>combination</em> of [certain] theological resources,” namely these three—</p>

<ul><li>“we must adopt <em>a very high doctrine of humanity</em> and suppose that indeed humans are of very particular concern to God.” This is linked with the Incarnation.</li>
<li>“we must take very seriously <em>the cross as costly to God</em>, as <em>part</em> of God’s hugely costly way of taking responsibility for the creative process.”</li>
<li>“we must give <em>some account of the redemption of the non-human creation</em> …” This is linked with the Trinity. (p. 279 in first edition, 1999)</li></ul>

<p>Given limited space, I’ll focus almost exclusively on the second idea, though we may want to discuss all of them below. </p>

<h3>The Crucified God</h3>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/davis_te_3_2.jpg" alt="" height="410" width="570"  /><br />View of the entrance to the main camp of Auschwitz (May 1945). The gate bears the motto, "Arbeit Macht Frei" (Work makes one free). United States Holocaust Memorial Museum (<a href="http://idamclient.ushmm.org/IMAGES/(S(jpksgemvvs32jp2s3yxwqvax))/RetrieveAsset.aspx?instance=IDAM_USHMM&qfactor=2&width=640&height=480&crop=0&size=1&type=asset&id=1067785">Source</a>).</p>

<p>We start with something that arose in a context entirely unrelated to evolution, Jürgen Moltmann’s (read more <a href="http://en.wikipedia.org/wiki/J%C3%BCrgen_Moltmann">here</a> and <a href="http://www.christianitytoday.com/ct/2005/september/20.120.html">here</a>) notion of <a href="http://www.amazon.com/gp/product/0800628225/ref=as_li_ss_tl?ie=UTF8&camp=1789&creative=390957&creativeASIN=0800628225&linkCode=as2&tag=thebiofou06-20">The Crucified God</a><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=0800628225" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" />. The theological point and the emotional impact of Moltmann’s conception is aptly captured in this stark passage, written in response to Elie Wiesel’s dark story of a child who was publicly hanged at Auschwitz: “like the cross of Christ, even Auschwitz is in God himself. Even Auschwitz is taken up into the grief of the Father, the surrender of the Son and the power of the Spirit.” (p. 278) A recent sermon by Matt Bates, pastor of Centenary United Methodist Church in Richmond, fleshes this out for us in a very accessible way; please read <a href="http://fromtheheartofthecity.blogspot.com/2012/08/sermon-for-sunday-august-26.html">the whole sermon</a> before going any further.</p>

<p><strong>Repeat: please read the sermon. It’s a vital part of what I’m trying to say.</strong></p>

<p>Now that you see more clearly what the “Crucified God” is about, let’s see what John Polkinghorne says about it: </p>

<blockquote><p>“This profound and difficult thought meets the problem of suffering at [the] level which its deep challenge demands. The insight of the Crucified God lies at the very heart of my own Christian belief, indeed of the possibility of such belief in the face of the way the world is. But this can only really be so if God is indeed truly present in that twisted figure on the tree of Calvary. Only an ontological Christology is adequate to the defence of God in the face of human suffering. God must really be there in that darkness.” (Belief in God in an Age of Science, p. 44) </p></blockquote>

<p>Be sure to notice two things in this passage. First, Polkinghorne confesses that his own Christian faith depends on such a conception of God, but there are only two very brief references to evolution in the entire eloquent chapter from which I’ve quoted. There’s plenty of science there, but almost all of it is modern physics, not biology. (I’ll leave it as an exercise to “students” to get a copy of this excellent little book and fill in the blanks.) In other words, evolution doesn’t shape Polkinghorne’s theology nearly as much as his theology shapes his view of evolution. </p>

<p>The second thing to notice is that in the last three sentences Polkinghorne is doing something subtle, but extremely important—something that I don’t want anyone to miss. Contrary to some of the most influential voices in the science and religion “dialogue” (some examples would be Haught, Ian Barbour, and the late Arthur Peacocke), Polkinghorne affirms the full divinity and humanity of Christ, in a classical Chalcedonian sense. Read those sentences again a couple of times, and you should see what I’m driving at. As he says a bit later on, “Unless there really is a God who really was ‘in Christ reconciling the world to himself’ (2 Cor. 5:19), then the cross is no answer to the bitter problem of the suffering of the world.” (p. 45) In other words, one can only take this approach to theodicy unless one actually believes in the reality of the Incarnation; only an orthodox Christian can speak meaningfully of the “Crucified God.” In the final part of this column, when I’ll present Polkinghorne as a contemporary exemplar of a theologically “orthodox” TE, it’s <em>partly</em> this aspect of his thought that I will have in mind.</p>

<p class="caption-right"><img src="http://biologos.org/uploads/static-content/davis_te_3_3.jpg" alt="" height="384" width="270"  /><br />Lucas Cranach the Elder</p>

<p>Finally, I should note that the term “crucified God” is not actually modern. Although Moltmann wrote an influential book about it, the language comes from <a href="http://triablogue.blogspot.com/2011/09/martin-luthers-theology-of-cross.html">Martin Luther</a>. Another physicist-theologian, George Murphy, writes in a highly Lutheran way about <a href="http://www.amazon.com/gp/product/1563384175/ref=as_li_ss_tl?ie=UTF8&camp=1789&creative=390957&creativeASIN=1563384175&linkCode=as2&tag=thebiofou06-20">The Cosmos in the Light of the Cross</a><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=1563384175" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" />, advancing the view that a “theology of the cross” in which God sets aside power to become a participant in the universe, even to the point of death, takes priority over a “theology of glory,” in which we seek God first in the power behind nature, not in the powerlessness of the cross. For a short version of Murphy’s ideas, go <a href="http://biologos.org/uploads/projects/murphy_scholarly_essay.pdf">here</a>. </p>

<p>Once again, we need to stop mid-stream. These ideas are deep and perhaps too new for many readers, and it’s best to reflect on them before we go further and even deeper.</p> <br> </br><br> </br>]]></content:encoded>
        <pubDate>Tue, 11 Sep 12 05:00:06 -0700</pubDate>
        <dc:creator>Ted Davis</dc:creator>
        <!--<dc:date>Sep 11, 2012 05:00</dc:date>-->
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        <title>Mending the Disconnect</title>
        <link>http://biologos.org/blog/mending&#45;the&#45;disconnect?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/mending&#45;the&#45;disconnect?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>How can it be that two things we love and treasure—two things that are absolutely central to ourselves and the lives we’ve built—seem so often to be at odds with each other?</description>
        <content:encoded><![CDATA[<p>How can it be that two things we love and treasure—two things that are absolutely central to ourselves and the lives we’ve built—seem so often to be at odds with each other?  While I could be talking about my two sons (the last weeks of summer “down-time” saw their share of brotherly bickering), here I mean my faith in Christ on one hand, and my respect for science on the other.  I am both a scientist and a committed Christian. I’ve spent years working in a lab, and years working with young kids in church settings.  I love both worlds, and both have been paramount in shaping me and my life. But recently I’ve found myself feeling at odds with one or the other, depending on the context. Why is this, and where does it leave me? It’s that odd feeling of “disconnect” between two profoundly important communities that I’d like to write about today.</p>

<h3>My walk in the scientific/evangelical world – Who am I?</h3>
     
<p>First, a little history.  While I was working towards my doctorate in Bioengineering at the University of Washington, my husband and I attended a Presbyterian church in Seattle.  Young and newly married, we chose to help in Sunday School, and found our niche teaching second graders there for almost 10 years.  During that time I was very involved in the scientific world and surrounded by a university community that had a real appreciation for science.  Wrapped up as I was in the lab, focusing on my dissertation, and living in a climate of serious inquiry and study, I was unaware of any significant disconnections between science and faith. Science was actively integrated with faith from the pulpit of our church, and in turn, we always loved to bring little bits of science into our lessons—even to the point of using sediment deposits in the Black Sea as evidence of a regionally-based ‘flood’ event thousands of years ago during our lessons about Noah’s ark.  No one complained.</p>

<p>As I loved research, I continued to work in a lab at UW once I finished my PhD. But I also had two babies while completing my dissertation, and eventually found it challenging to balance work and family.  When my husband was relocated to San Diego, I took that difficult uprooting as an opportunity to step back from labwork and spend more time with preschoolers.  Leaving life at a fast-paced urban research university for the relaxed and resort-like coastal suburbs of San Diego County was another kind of culture shock, compounded by the fact that we found looking for a new church to be particularly hard.   After some consultation with friends of friends, we stepped out of our Mainstream Protestant comfort zone and visited a Calvary Chapel.  </p>

<p>There was certainly an adjustment period (eventually we stopped doing a double-take every time we saw the board shorts and flip-flops on Sunday morning – even on the stage!), but over time we were able to plug into a dynamic evangelical community.  We found the vibrant, Christ-centered church to be a great place to make deep and lasting connections with the people, both through small groups and by serving in Children’s Ministry. Making a personally quite revolutionary decision to fully step away from the busy life of a researcher, I found a new calling when I took on a part time job leading the church’s 2nd and 3rd Grade program.</p>

<h3>A surprising disconnect in the faith community</h3>

<p>I now find myself spending my weekends with over a hundred kids and volunteers, and it has been a great adventure.  However, it has also been through this ministry that I discovered first hand the uncomfortable disconnect between science and the evangelical church.  At first it was just a few throw-away comments from fellow believers in church: dismissal of museum exhibits, eye-rolling at the ancient geology of the Grand Canyon, etc.   Of course, I had heard rumors of such thinking, but I was a little surprised to find it to be so common in the Evangelical community.  Many people I knew were rejecting large swathes of science outright.  Sometimes I give out prizes to the kids in my class—trinkets and other insignificant plastic things that kids love—and some of the items I had in our “prize box” were “dino eggs with dino facts.”  To my amazement, these items brought on complaints from parents because of their reference to the age of the dinosaurs some 65 million years ago.</p>

<p>Meanwhile, my husband—an environmental engineer with a background in Geology—was serving at the church with older kids.  In his class he often heard that favorite question from Christian kids, “How do the dinosaurs fit into the creation story?” But the only answer he’d ever heard in response was the explanation that dinosaurs were obviously on the ark, and somehow became extinct after the flood.  He is the most easy-going person ever, but he was taken aback by this wholesale dismissal of geologic history and by the lack of a more nuanced discussion of Scripture.  At that point we began to ask around, and learned that, yes, this is a common way of thinking in evangelical circles.</p>

<p>These attitudes about science and the Bible seemed especially prevalent among the many home schooling families in our community.  More than half of my church coworkers homeschool or send their kids to Christian schools.  Several of these wonderful folks were homeschooled themselves, and very few attended secular universities.   Many of the children and families that I minister to each week are also homeschooling families, and for the first time I became troubled by what they were learning about science and the natural world. I attended public school and secular universities both for undergraduate and graduate studies, and (after much thought and discussion) we chose to send our own kids to public schools, not least because  we want them to have great training in science and math.  While we are fortunate enough to live in a community with challenging public schools well equipped to prepare kids in those areas, I want the same for homeschooled kids, as well. All Christian young people should be able to both excel in science and grow in their understanding of the God of Scripture, whether they’re taught in institutional settings or at home.  I only wish I could better trust available homeschooling science curriculum materials to achieve that end.</p>

<h3>Is there cause for concern? Does it really matter?  </h3>

<p>One can correctly argue that Jesus’ incarnation and resurrection are the central beliefs and values of the Christian faith.   In the end, does it matter what we teach our kids about origins or the age of the Universe?   What harm is there in these black and white beliefs held by good people doing good things?</p>

<p>I believe that it does matter, for several reasons:</p>

<ol><li>We have generation of Christian young people who are not trained in scientific principles that will allow them to meaningfully contribute to fields such as cosmology, geology, biology, etc.  Our universities especially need an evangelical presence!</li>
<li>Thoughtful, scientifically-minded people—both young and old—will be pushed AWAY from the evangelical community.    I know that I could not attend a church that dismisses scientific evidence in order to fit nature’s narrative into preconceived ideas, or one where scientists are actively mocked. </li>
<li>The faith of homeschooled and other Christian kids can be challenged when they have their first college classes on geology, evolutionary biology, etc.  Many will reach a point where they think they have to choose between their faith and what the scientific world tells them about the created order.</li>
<li>Simply, evangelicals are in danger of looking a bit ridiculous to reasonable and educated people when they appear so fearful of science, making it easier for non-Christians to dismiss the gospel message.</li></ol>

<h3>Exploratory Efforts –Communicating God’s Revelation in Nature</h3>

<p>Despite these experiences and concerns, my overall impression of the evangelical community’s perspective on science is that in most areas, everything is fine. But it seems that sensitivity around a few points—particularly origins, the age of the earth and climate change—limits open discussion even of more general scientific issues, and as wonderful as they are, our pastoral staff rarely invokes natural wonders to illustrate doctrine, whether speaking to adults or kids.  </p>

<p>As a Christian, a scientist and an educator, I particularly want the kids I work with to know that it is good to wonder about the world around us and say “God Did It – But How?”  More than that, I want them to know that they do not have to be afraid of the answers to those questions.  So I ask myself, “Is there anything I can do?”  As it turns out, I’ve concluded that there <em>are</em> ways that I (like any of us) can help, even if the efforts are incrementally small at first.  Our church hosts a tremendous summer camp that teaches kids Bible stories and worship, but also gives children a chance to choose an “elective” and learn more about subjects like art, music, cooking, a sport, or science.   Each summer more than 1,000 kids attend this outreach at our church campus, and I was privileged this past summer to be able to “coach” science and write up a fun science curriculum that dovetailed with the various Bible stories the kids were hearing.   </p>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/Touryan-Whelan_music_box.jpg" alt="" height="348" width="220"  /></p>

<p>The practice of science became a wonderful avenue for sharing God’s love and the Salvation Story whether I pulled ideas for experiments directly from the Bible (such as creating, testing and optimizing sling shots like David) or used the stories more allegorically; extracting DNA from strawberries (always a hit with kids) illustrated our uniqueness in God’s eyes, while creating a solar music box demonstrated the beauty of living in God’s light vs. hiding in the darkness.  I found that this was an excellent place in which to bring young Christians (and non-Christians) into an understanding and appreciation of basic scientific principles in conjunction with communicating spiritual truth.  My hope is that those lessons will open their eyes to further inquiry as they grow up and move on through junior high, high school, and—for some—beyond. </p>

<p>In the end, I was inspired to write out a preliminary curriculum, combining scriptural lessons with science experiments. This effort led me to co-author <a href="http://www.amazon.com/gp/product/0983960232/ref=as_li_ss_tl?ie=UTF8&camp=1789&creative=390957&creativeASIN=0983960232&linkCode=as2&tag=thebiofou06-20">Wonders In Our World: Insights From God's Two Books</a><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=0983960232" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" />, a book that further explains the complementarities of God’s Two Books – the book of nature and Scripture.  While materials like these can be used in church settings such as the summer camp at our Calvary Chapel, my hope is that they will become a resource for Christian families all year long—especially for those homeschoolers I love so much.  A full curriculum may still be a ways off (perhaps I’ll have more to share about that in a future post), but in the meantime, I’m honored to be able to draw on both Scripture and science to share my joy in Christ and his creation.</p>]]></content:encoded>
        <pubDate>Mon, 10 Sep 12 05:00:02 -0700</pubDate>
        <dc:creator>Lara Touryan-Whelan</dc:creator>
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        <title>Denisovans, Humans and the Chromosome 2 Fusion</title>
        <link>http://biologos.org/blog/denisovans&#45;humans&#45;and&#45;the&#45;chromosome&#45;2&#45;fusion?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/denisovans&#45;humans&#45;and&#45;the&#45;chromosome&#45;2&#45;fusion?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The Denisovans, an extinct hominid group that interbred with modern humans, made the news again lately with the publication of a more detailed study of their genome. One of the many interesting findings was that the Denisovans share the same chromosome 2 fusion that modern humans have.</description>
        <content:encoded><![CDATA[<br> </br><p>The Denisovans, an extinct hominid group that interbred with modern humans, made the news again lately with the publication of a more detailed study of their genome. One of the many interesting findings was that the Denisovans share the same chromosome 2 fusion that modern humans have. In this post, I review what we know about the origins of human chromosome 2, and then discuss the new Denisovan findings and their implications. </p>

<h3>The origins of human chromosome 2: a brief review</h3>
<p>Though I have discussed the evidence for a fusion event leading to human chromosome 2 before, perhaps a brief review of the evidence is in order. The human genome is made up of 23 pairs of chromosomes (for a total of 46 chromosomes). This makes us something of an oddity among living great apes, all the rest of whom  have 24 pairs of chromosomes (for a total of 48). Given that there are many independent lines of evidence that support the conclusion that we share a common ancestor with other great apes, this poses something of a conundrum: how is it that our species arrived at this specific chromosome number? If we were to represent this “problem” on a phylogeny, or tree of relatedness, it would look something like this (not to scale):</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/denisovans_fig_1.jpg" alt="" height="357" width="434"  /></p>
 
<p>Our closest living relatives, chimpanzees and bonobos, both have 48 chromosomes, as do all other great apes such as gorillas and orangutans. This pattern has one of two explanations, one of which is much more likely than the other. Either the common ancestor to these species had 48 chromosomes, and there was an event that reduced that number to 46 specifically on the lineage leading to humans (option A), or the common ancestor species had 46 chromosomes, and there were independent, repeated events that increased chromosome number in all other great ape species (option B). We can compare these options by placing the required event(s) on the phylogeny (again, not to scale): </p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/denisovans_fig_2.jpg" alt="" height="300" width="570"  /></p>
 
<p>It should be obvious that the option that requires the fewest events is the more likely one – in this case option A with an event that reduces chromosome number in the lineage leading to humans. The other option, that of repeated, independent events to increase chromosome number, remains a formal, but unlikely, possibility. Events that reduce chromosome number are not frequent occurrences, so Option A is more likely than Option B.</p>

<p>We can also find further support for Option A, because it predicts a specific type of event, namely one that reduces chromosome number. Since <em>loss</em> of a large amount of chromosomal material is almost always detrimental, we need an event that reduces chromosome number without losing information. One way for this to happen is for two chromosomes to fuse together and become one. Initially, this event would produce an individual with 47 chromosomes, where two different chromosomes get stuck together. Contrary to what is often assumed, this individual would be fertile and able to interbreed with the others in his or her population (who continue to have 48 chromosomes). In a small population, over time, two relatives who both have one copy of the fusion chromosome may mate and produce some progeny with two copies of the fused chromosome, or the first individuals with 46 chromosomes. Since either a 48-pair set or a 46-pair set is preferable for ease of cell division, this population will either eventually get rid of the fusion variant (the most likely outcome), or by chance will switch over completely to the “new” form, with everyone bearing 46 chromosome pairs. While not overly likely, this type of event is not especially rare in mammals, and we have observed this sort of thing happening within recorded human history in other species.  Some mammalian species even maintain distinct populations in the wild with differing chromosome numbers due to fusions, and these populations retain the ability to interbreed. </p>

<p>Further evidence for a fusion event in the lineage leading to modern humans comes from comparing <em>synteny</em>, or gene locations and orders on chromosomes within modern great apes – an issue we have discussed <a href="http://biologos.org/blog/signature-in-the-synteny">here</a> before.  In brief, what we see in human chromosome 2 is exactly what we would predict for a fusion event. When compared to other great apes, we see the genes on human chromosome 2 match up, in order, with two smaller ape chromosomes. We also see that sequences used at the tips of chromosomes are present at the proposed fusion site, and that human chromosome 2 has not one but two sites for the cell cytoskeleton to attach to for cell division – but that one of the sites is mutated and not functional, though it lines up precisely with the location of this site on the appropriate ape chromosome. Together, this evidence consistently supports both common ancestry for humans and great apes, and specifically that the difference we see in our chromosome numbers arose due to a single fusion event. I briefly discussed this evidence in my <a href="http://biologos.org/blog/the-sorrows-and-joys-of-teaching-evolution">last post</a> where I describe how I teach some of this material and the compelling impact it has on students exploring the evolution question for the first time. </p>

<h3>Enter the Denisovans</h3>
<p>With that as background, we are now prepared to appreciate a new finding that comes from genomics work done on the Denisovan hominids, an archaic species that is more closely related to Neanderthals than to us, but that nonetheless interbred with some anatomically modern humans as they migrated out of Africa and populated the globe. (For those not familiar with the Denisovans, or the evidence for our interbreeding with them, both Darrel Falk and I have written on this previously, <a href="http://biologos.org/blog/a-geneticists-journey">here</a> and <a href="http://biologos.org/blog/understanding-evolution-neanderthals-denisovans-and-human-speciation">here</a>). Recently, a more detailed understanding of the Denisovan genome <a href="http://www.nature.com/news/new-dna-analysis-shows-ancient-humans-interbred-with-denisovans-1.11331">was published</a>, and nested in the new information is the discovery that the Denisovans share the 46 chromosome set with the same fusion that <a href="http://johnhawks.net/weblog/reviews/denisova/denisova-chromosome-2-2012.html">we have</a>. This strongly supports the hypothesis that the fusion event predates the separation of our species. If we were to represent this on a phylogeny, we can now place this event with more accuracy than before (as before, the phylogeny is not to scale): </p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/denisovans_fig_3.jpg" alt="" height="452" width="513"  /></p>
 
<p>Despite this new information, one obvious question remains. Did the Neanderthals also have the 46-pair set? From looking at the phylogeny above, we can see that the most likely answer is that they did, since the fact that the Denisovans had it strongly implies that the last common ancestor of humans and Neanderthals / Denisovans had it as well, and the Neanderthal-Denisovan split comes later. While the Denisovan DNA samples are of high enough quality to make this assessment, we do not yet have Neanderthal DNA of high enough quality to do the same analysis with current methods (though one additional feature of the new work on the Denisovan genome is developing more sensitive DNA sequencing techniques that may resolve this question in the future).</p>

<p>In other words, this fusion seems to be an ancient one, predating our species by several hundred thousand years. Present estimates of the last common ancestor between humans and Neanderthals / Denisovans  range at about 800,000 years ago.</p>

<h3>Implications for understanding our “becoming human”</h3>
<p>The main implication from this work is that it places the fusion event well before the advent of our species. I’ve often chatted informally with Christians about evolution, and at times some have thought that this fusion event was what “started” our species, or made our species unable to interbreed with other groups. Some have even suggested that perhaps the fusion event was what produced the first human (i.e. Adam). </p>

<p>Note that thinking this way suggests a misunderstanding of how chromosome fusions occur and what effect they have on their hosts. A fusion does not precipitate a speciation event, but rather the individual with the fusion remains a part of his or her population, and able to interbreed, even if with reduced fertility. Also, there is no necessary biological effect or change that the fusion produces on the appearance of the organism.  These misunderstandings aside, however,what this new evidence shows is that this fusion event took place long before modern humans arose at around 200,000 years ago. Indeed, the 800,000 years ago date for the last human - Denisovan common ancestor means that this is the most recent date possible for the fusion. While it is an interesting piece of our evolutionary history, it doesn’t seem to have much to do with how we came to acquire the traits that set us apart from, and ultimately outcompete, other similar species.</p> 
<br> </br>]]></content:encoded>
        <pubDate>Thu, 06 Sep 12 13:07:21 -0700</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
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        <title>Series: Evolution and Personal Faith: How Christian University Students Resolve the Conflict</title>
        <link>http://biologos.org/blog/series/evolution&#45;and&#45;personal&#45;faith&#45;christian&#45;university&#45;students?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/evolution&#45;and&#45;personal&#45;faith&#45;christian&#45;university&#45;students?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>As students across the country begin their academic year, nearly all of them will receive some kind of science education, and many will experience tension between what they have been taught about God&apos;s creation in church or at home, and what they are likely to find in science textbooks and hear from their instructors.  How should that tension be addressed? How might it be resolved?  What resources does the Church have (and still need) to equip our young people to honor the truth God has revealed in both his Word and his world, and to share in the work of his Kingdom?  This series from Mark Winslow, Dean of the College of Natural, Social, and Health Sciences at Southern Nazarene University (SNU) in Bethany, OK, focuses on how Christian biology&#45;related majors at a mid&#45;Western Christian liberal arts university reconciled evolution and their personal religious beliefs.</description>
        <content:encoded><![CDATA[<p class="intro">As students across the country begin another academic year, nearly all of them will receive some kind of science education, and many will experience tension between what they have been taught about God's creation in church or at home, and what they are likely to find in science textbooks and hear from their instructors.  Part 1 of this series described the strong influence our study participants’ parents had in their children’s lives and belief in Young Earth Creationism. Today’s Part 2 explores the process through which participants negotiated their perceived conflict between evolution and personal faith, and the factors that contributed to their apprehension.</p>

<h3>The Crucible of Conflict </h3>

<p>When they entered the study site university as freshmen, many of the participants had no concept of Evolutionary Creationism and instead held to anti-evolution perspectives. Two notable exceptions are Diana and Tiffany. Diana’s father was a geologist and taught her from a young age to see evolution as valid and without contradiction to her Catholic faith. Tiffany was also unique in that she accepted non-human evolution while in high school when she discovered that evolution “didn’t necessarily mean that God didn’t create everything.” Still, Tiffany faced uncertainty about human evolution. Both Diana and Tiffany were surprised at how many of their fellow classmates in the Origins course struggled with evolution. Tiffany said, “I didn’t even realize that until I actually took that Origins course and there were kids in there . . . [where] the light bulbs were just coming on and I was like [? – quizzical, bewildered expression].”</p>

<p>Diana and Tiffany’s relative ease with evolution contrasted with most other participants who struggled to overcome their distrust of evolutionary ideas. The data indicate two primary sources of anxiety: participants’ apprehension about how they would defend an emerging acceptance of evolution to their parents; and participants’ awareness that the beliefs they once thought to be sacrosanct were beginning to change.</p>  

<h3>What Will My Parents Think?</h3>

<p>Participants who accepted evolution worried about how they would be viewed by their parents. Eight participants indicated that they had experienced conflict with their parents over evolution or were too worried to broach the issue with their parents. Megan still hadn’t discussed evolution with her parents in the year since she took Origins. She said, “I’m kinda . . . scared about talking to them [about evolution].”</p>

<p>In contrast to Megan, five participants broached the subject of evolution with their parents and recounted the heated arguments that ensued. The parents reportedly denied evolution as a valid theory and stated that it contradicted the Bible. For example, Rachel recalled tense exchanges with her father in which they would get into arguments and “become angry.” She cited his comments, “Why are you thinking this way? We sent you off to a Christian school [and] you are learning all this liberal garbage?” Furthermore, all five participants indicated their parents viewed a literal interpretation of Genesis as a necessary condition for salvation. Rachel remarked, “I have been taught my whole life you can’t be both [a Christian and an evolutionist], that’s just not how it works.”</p>

<p>The emotional stress that many of these participants experienced in forming increasingly independent views about evolution in direct opposition to their parents cannot be overstated. Gail felt so pressured on the matter that she formulated her scholarly paper as a letter to her father. The genuine emotion of her plea merits quoting at length below. The title of her paper in Origins was “Dear Dad…” and the following are excerpts:</p>

<blockquote>Dear Dad,<br>
I am writing to explain to you what I have learned in my origins class this spring. . . . You and mom have always had a strong belief that God created the earth in six twenty-four hour days as outlined in Genesis one; however, probably much to your horror, this class has challenged that belief. Please keep in mind that this class never once challenged the existence of God. . . . It set out to explain how God created the earth.</blockquote>

<p>Later in the paper, Gail implored her father, “Please do not question my walk with God.” She explained how theologians “consider Genesis one to be a Hebrew poem,” and that the “Bible was not written as a scientific journal.” Gail concluded her paper with,</p>

<blockquote>Dad, I know this letter is probably discouraging to you – maybe someday I will be convinced otherwise, but this seems very logical and practical to me. I pray that you will not condemn me in your disappointment, but understand that it is not a contingent factor in my salvation… I pray you have at least been open to this letter and accepting of my stance.<br>
Your Loving Daughter, Gail</blockquote>

<p>Asked why she wrote the paper to her father, Gail responded, “I was . . . just trying to convince him that . . . I hadn’t gone off the deep end, [that] I wasn’t crazy.” Gail considered the paper as “a little therapy session getting everything I wanted to say to my dad out on paper and it just almost felt like I was relieving a burden.” In the two years since she completed the paper and during the time of the study, Gail still hadn’t given it to her father.</p>

<h3>Changing Beliefs</h3>

<p>A second source of anxiety for participants was a developing awareness that some of their long-held beliefs were now beginning to change at the university.  Many participants did not realize that a Christian could accept evolution until they arrived at the study site university.</p>

<p>For some participants, it was a complete shock to see a professor present evolution in the Zoology classroom.  Stephanie described her evolution encounter in freshman Zoology as the “most upsetting time” in her college experience, and her “defining moment of . . . being challenged.” She recounted, “I was sitting there and she [the Zoology professor] started talking about it and I was just floored that she could believe in evolution. I was like, ‘You call yourself a Christian and you believe in evolution?!’ [her voice elevated and sounding incredulous]” Stephanie continued, “I remember walking out of that class so angry. I can still remember how angry I was.” Reflecting on her experience, Stephanie offered “disgusted” as a “good word” for how she felt.</p>

<p>Ashley said that learning about evolution “was a culmination of your thoughts for so many years being shattered and then you’re picking pieces here and there and adding your own.” She expressed a personal sense of shock in first learning that a Christian could accept evolution. A look of exasperation came over Ashley’s face when she reflected on that new realization her sophomore year when a guest lecturer spoke on campus about evolutionary creationism. With a laugh of incredulity, she said,</p>

<blockquote>Now do you see what I mean about being blindsided or bombarded with things that for 18 or 19 years you’ve held true? I mean, to me, it’s almost like for 23 years believing that my mom and my dad are my parents and then one day, them saying, ‘No, you’re adopted.’ That’s kinda like what it was to me. Just this truth for so long and then you’re just like, ‘What?!’ That’s how out of the blue it was to me.</blockquote>

<p>Stephanie’s and Ashley’s reactions of anger and shock were apparently provoked by a sudden, unacknowledged fear that a belief they had held so strongly for most of their life was suddenly overturned. As was true with many participants, Stephanie and Ashley realized for the first time that a Christian could accept evolution.</p>

<p>Many participants reported that the process of coming to an acceptance of evolution was journey-like and took several years. Some who learned about evolution in their freshman Zoology class didn’t resolve the issue in their minds until their junior or senior year. In many cases, the process was a slow accumulation of scientific evidence from various science courses. Many participants reported that Origins was a semester-long process of working through perceived conflicts. Ashley described her experience in the course: “There you were, a whole semester, just basically ripping your hair out about where you stand.” </p>

<p>Some participants mentioned they had “a-ha” moments along the journey. A few participants encountered a new perspective in a lecture or in a book, and their ideas about evolution and personal religious beliefs suddenly found greater clarity in the context of each other. However, these advances were steps along an extended journey. Many participants indicated that the process was a tug-of-war experience. They were pulled back and forth in deciding what scientific aspects to accept and how their religious beliefs would mesh with that new scientific acceptance. The comments of Ashley illustrate the struggle:</p>

<blockquote>I wanted to please both sides of myself. I wanted to please the science part of me but I also wanted to be true to the faith part of me and I wanted to get right in the middle and make sure both were alright and sometimes it’s not possible.</blockquote>

<p>Later in her interview, Ashley also remarked, “I felt like you’d get three steps ahead and you’d be ‘Alright’ and then five back! . . . And it was just a constant thought process . . . about where do I stand on this new issue.”</p>

<p>Jennifer joked about trying to find closure on human evolution saying, “When it [the Bible] says man was created instantaneously, one [evolution] says man was created over time, that was hard, but we eventually worked that one out.” Asked what she meant by “we,” Jennifer laughed and offered as an explanation, “Well me, myself, and I.” Her joke implies the internal, contentious, decision-making process to which many participants similarly alluded.  Throughout many participants’ recollections was an undercurrent of anxiety in becoming aware that some of their religious beliefs were changing for the first time.</p>

<p>In the midst of the struggles, four factors appeared to be constructive for these participants in their acceptance of evolution.  Next week, part 3 in this series focuses on those four factors.</p>]]></content:encoded>
        <pubDate>Tue, 28 Aug 12 05:37:57 -0700</pubDate>
        <dc:creator>Mark Winslow</dc:creator>
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