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        <title>Custom Feed &#45; The BioLogos Forum</title>
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    <dc:date>2013-05-24T11:51:22-08:00</dc:date>    
    
    

            
            
        
      <item>
        <title>How can evolution account for the complexity of life on earth today?</title>
        <link>http://biologos.org/questions/complexity&#45;of&#45;life?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
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        <description>A complex biological structure with many interacting parts might appear, at first glance, as if it were originally created in its present form with all its interlocking components fully formed and intact. It doesn’t seem possible that they developed step by step via biological evolution. In Darwin’s Black Box, Michael Behe introduces a term that he and other proponents of Intelligent Design use for this concept: irreducible complexity.</description>
        <content:encoded><![CDATA[<p>A complex biological structure with many interacting parts might appear, at first glance, as if it were originally created in its present form with all its interlocking components fully formed and intact. It doesn’t seem possible that they developed step by step via biological evolution. In <em>Darwin’s Black Box</em>, Michael Behe introduces a term that he and other proponents of Intelligent Design use for this concept: irreducible complexity.  No part of an irreducibly complex system has any apparent function except in its relation to the other parts. </p>

<p>Behe suggests that the parts of irreducibly complex biological structures would be useless unless they appear all together, and evolution has no mechanism to build complex structures like this. Natural selection, after all, works just one step at a time.  Furthermore, natural selection has no foresight. Put simply, if a change is going to be preserved, that change will generally need to confer some extra benefit—no matter how small—to the next generation.  Behe has oversimplified things a little.  Evolutionary theory predicts that in small populations, neutral changes—and even changes that are slightly deleterious—will survive sometimes.  Still, in general, he is correct.  So let’s examine what evolutionary biologists believe about how complex structures are built.</p>

<h3>A Seemingly “Irreducibly Complex” System</h3>
<p>As Scott Gilbert shows in his textbook <em>Developmental Biology, Eighth Edition</em>, the evolution of the interconnecting bones of the middle ear illustrates how supposedly irreducibly complex structures can in fact be generated by the stepwise process of gradual change and natural selection. Fish, for example, have a special system called the lateral line system that extends along the length of their bodies and enables them to detect vibrations in the water. They also have an inner ear, which is useful for balance and supplements the lateral line system in detecting vibrations. With the movement of certain water-dwelling species to land, the lateral line system became obsolete because what was needed was a way of amplifying the vibrations in air, not water. A bone that had previously been used as a support for the skull became the stapes. Along with supporting the skull, the stapes also transmitted sound vibrations—which come in part through the skull and jaw—to the inner ear. How do we know it’s the same bone? By examining its embryological origin in fish and reptiles. In reptiles, there is just one bone that transmits air vibrations to the inner ear: the stapes.</p>
<div class="see-also">
<p>For more, see Scott Gilbert (2006). <strong><em><a href="http://www.amazon.com/gp/product/087893250X?ie=UTF8&tag=thebiofou06-20&linkCode=as2&camp=1789&creative=390957&creativeASIN=087893250X">Developmental Biology</a></strong><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=087893250X" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" /></em> 8th Edition. Sinauer Associates, p. 17, 742.</p></div>
<p>We can also trace the origin of the two other middle ear bones, the incus and malleus, by looking at fossils from the time of the origin of mammals about 230 million years ago.  Until that point, two bones—the articular and quadrate bones—served as the hinge of the jaw. Investigators, however, believe they carried out a second function. Because they were located adjacent to the stapes, it is likely they also aided in transmitting sound vibrations to the stapes.</p>

<p>Here is where the story gets especially interesting. Right at the time of the origin of mammals it turns out there were several species—perhaps many, paleontologists are sure they don’t have all of the transitional species preserved in the fossil record—that had a double hinge at the jaw. Not only did the articular/quadrate bones serve as a hinge, but another pair of bones, the dental/squamosal bones, served that purpose as well. So the articular/quadrate bones, which transmitted sound, no longer had to also serve as a jaw-hinge. This second function became redundant because there was another set of bones doing the same thing.</p>

<p>With that redundancy, the articular/quadrate bones of the jaw were free to become the incus/malleus of the middle ear. We have a record of the transition, and we have a record of the building of a so-called irreducibly complex structure. Parts that were initially used for one function became, for a period of time, useful for two functions. Then, one function was refined while the other function became redundant or unnecessary. In other words, parts that were initially used for one purpose become co-opted for another purpose; and looking back through the fossil record, we can see the intermediates. </p>
<div class="see-also">
<p>For more, read Darrel Falk's blog entries <strong><a href="http://blog.beliefnet.com/scienceandthesacred/2009/08/on-reducing-irreducible-complexit-part-i.html" target="_blank">On Reducing Irreducible Complexity Part 1</a></strong>, <strong><a href="http://blog.beliefnet.com/scienceandthesacred/2009/09/on-reducing-irreducible-complexity-part-ii.html" target="_blank">Part 2</a></strong>, and <strong><a href="/blog/reducing-irreducible-complexity-part-iii">Part 3</a></strong> on why the idea of irreducible complexity is problematic both scientifically and theologically.</p></div>

<h3>The Bacterial Flagellum</h3>
<p>In <em>Darwin’s Black Box</em>, Behe focuses on three things he considers to be irreducibly complex: the bacterial flagellum, the blood clotting cascade and the immune system.  The elements of these systems are molecular in nature and therefore the evolutionary intermediates are somewhat harder to document. Interacting molecules are not preserved for historical analysis like fossil bones of the skull and middle ear. In his book, Behe suggests that biochemistry gives no clue as to how complex interacting parts like these might have come about, and he confidently states that investigations have run up against a blank wall.</p>
<div class="see-also">
<p>See <strong><a href="http://www.millerandlevine.com/km/evol/design2/article.html" target="_blank">"The Flagellum Unspun"</a></strong> and <strong><a href="http://www.millerandlevine.com/km/evol/DI/clot/Clotting.html" target="_blank">"The Evolution of Vertebrate Blood Clotting"</a></strong> by Ken Miller.</p></div>

<p>It has now been 13 years since <em>Darwin’s Black Box</em> was written. The structures and processes Behe chose to focus on have been studied quite extensively. Although it is impossible to go back and analyze step by step what actually did happen, much evidence for straightforward evolutionary explanations has accumulated over the years. The diversity in a given structure that we see when we compare different species tells us a great deal about how that structure might have come about.</p>

<p>Consider the bacterial flagellum, the example most commonly used to illustrate the principle of irreducible complexity. First, it is important to point out that the bacterial flagellum comes in many different varieties, sometimes with profound differences between one species and another. This alone illustrates that the flagellum is probably not irreducibly complex. It can be altered, and when it is altered, it does not necessarily lose its function.</p>
<div class="see-also">
<p>See Miller, Kenneth, (2008), <strong><a href="http://biologos.org/resources/only-a-theory/"><em>Only a Theory: Evolution and the Battle for America’s Soul</em></a></strong>, Viking Adult</p><p>See also Pallen, Mark J., and Nicholas J. Matzke, (2007), <strong><em><a href="http://www.nature.com/nrmicro/journal/v4/n10/abs/nrmicro1493.html" target="_blank">From The Origin of Species to the origin of bacterial flagella</a></em></strong>.  Nature Reviews, Microbiology 4:784-790.</p></div>

<p>There are many species of bacteria, for example, that use the basal parts of the flagellum to deliver toxins into their host. A different set of bacterial species uses a portion of the flagellar machinery for another purpose. Species of the genus <em>Buchnera</em> live inside the sheltered environment of aphid cells in a symbiotic relationship. These bacteria no longer need flagella. However, each tiny <em>Buchnera</em> cell is studded with hundreds of copies of the flagellar base. As a <a href="http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TD0-4V4130J-1&_user=10&_rdoc=1&_fmt=&_orig=search&_sort=d&_docanchor=&view=c&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=73f2e31cf4db517f3d0bcf056557c6a5" target="_blank">recent paper</a> in the journal <em>Trends in Microbiology</em> shows, the purpose now is to serve as a passageway for the export of proteins and other material into the surrounding environment—the aphid cell in which the bacterium resides. So while we cannot follow the sequence of events step by step to illustrate how the various types of flagella have arisen, we can see how they have changed and, in some cases, even taken on whole new functions. The term for adapting a structure for a different purpose than that for which it originally arose is “exaptation.”  This is one important way in which complexity arises.</p>

<p>That is not the whole story, however, because individual parts have to be added into the structure as it becomes more complex or takes on new function. Where do those parts come from? Recently, investigators have <a href="http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TD0-4V4130J-1&_user=10&_rdoc=1&_fmt=&_orig=search&_sort=d&_docanchor=&view=c&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=73f2e31cf4db517f3d0bcf056557c6a5" target="_blank">shown</a> that the key protein in the molecular motor that causes the flagellum to rotate has a very similar structure to another protein that is used to transport magnesium into and out of cells. Both protein molecules have sections that fold in almost exactly the same manner, and when we analyze the order of their building blocks (amino acids), we see profound similarities. This illustrates a second principle in building complexity: It is done by co-option. Parts that are used for one purpose are co-opted to take on a second function as well. Sometimes, the instructions to build a part are encoded by identical duplicate genes. When that happens, co-option is especially straightforward. One set of instructions for making the original part is preserved while the duplicate set of instructions can gradually be modified through mutation and natural selection, allowing the part to become better and better at carrying out its new function. This illustrates a third principle of assembling complexity: adaptation through natural selection.</p>

<p>Even more revealingly, the supposedly irreducibly complex bacterial flagellum turns out not to be irreducible after all.  For example, there is a protein at the base of the flagellum, an ATPase, that drives the key structural subunit (flagellin) of the long hollow tube through its inner core, causing the flagellum to grow in length. Yet, it has been shown that flagellin can be transported to the end of a flagellum without this ATPase. The protein that was thought to be one of the flagellum’s most important parts can be done away with. This illustrates a fourth principle of building a complex structure: redundancy. Inside of cells, there is often more than one way to accomplish a particular purpose; as evolution “tinkers” with a complex structure, there is likely to be redundancy with certain parts at certain stages. One of these redundant mechanisms may become more specialized, and even perfected, as time goes by. </p>

<h3>The Eye</h3>
<p>Another system that is often held up as an example of irreducible complexity is the eye. People often ask: What good is a partly assembled eye? Is there any logical series of steps that could result in the creation—through the process of natural selection—of a structure so elegant as the eye of an eagle? What would be the starting point, anyway?</p>
<div class="see-also"><img src="http://biologos.org/uploads/questions/eye_video.jpg">
<p>Watch <strong><a href="http://www.pbs.org/wgbh/evolution/library/01/1/l_011_01.html" target="_blank">"The Evolution of the Eye"</a></strong> from PBS' <em>Evolution: "Darwin's Dangerous Idea"</em>.</p></div>

<p>All light-sensing devices in the animal world make use of a single light-sensitive molecule, retinal, which is derived from Vitamin A. Retinal can change its shape when it absorbs a photon of light. This molecule is always complexed with a protein known as an opsin. The two work together to sense light.</p>

<p>By analyzing the arrangement of the building blocks, or amino acids, in opsin, it is possible to show that all opsins are derived from a single ancestral gene. What purpose could the retinal/opsin combination have had in the earliest days of animal history?  It likely functioned to detect light in order to set the internal body clock that regulates the 24-hour cycle of biological processes, known as the Circadian rhythm. In recent years, it has become apparent that living processes inside of cells are tuned to function in a manner that is synchronized with the cycle of sunlight.</p>

<p>Circadian rhythms function throughout the living world, including single-cell organisms.  It seems likely, then, that the simplest light-detecting device arose through exaptation of a molecular device that was used to detect light—not so that an organism might move toward or away from the light, but so it could reset its molecular clock. Even the origin of opsin illustrates a basic principle of building complexity, co-option. Opsin is one of many G-protein receptors, which have come to take on many different functions through the history of life. When coupled with the light-sensitive molecule retinal, a G-protein receptor allows the cell to be sensitized to the presence and absence of light. Although we have no fossilized transitions that allow us to trace the various eye intermediates that have occurred in animal history, as we do with the middle ear, we do have a myriad of light-sensing devices in the animal kingdom that allow us to piece together how sophisticated eyes could have been created through a gradual process driven by natural selection. (You can read more about the prospective intermediates that exist in the animal world in a <a href="http://www.springerlink.com/content/m3k441k67q3n/" target="_blank">wonderful paper</a> by Ryan Gregory.)</p>


<p>If you choose to explore eye development in detail, be watching for examples of exaptation, co-option, step-by-step adaptation and redundancy. For example, you will note that the evolution of the lens illustrates co-option and redundancy. There are two ways to focus the image on the light-receiving cells at the back of an eye. One way is through an independent lens. The other way is through the transparent cornea in front of the lens. The lens is simply transparent crystallized protein molecules that are assembled in such a manner that they bring the image into sharp focus. There are a variety of proteins that can be crystallized to serve as an effective lens. It turns out that, depending on the evolutionary lineage, various proteins—including enzymes such as alcohol dehydrogenase (an enzyme for breaking down ethanol), glutathione S transferase and protein chaperones—are used for this purpose. This is a simple example of co-option and redundancy functioning together as part of the tinkering mechanism used for building a complex structure like the eye.</p>

<p>Two-thirds of animal phyla have some sort of light-sensing device. Although all of these light-sensing devices make use of retinal and opsins, there are differences in structure that we can trace to differences in evolutionary origin. In his 2003 book, <em>Life’s Solution</em>, Simon Conway-Morris documents at least seven independent origins of the eye resulting in very similar outcomes. For example, the eye of a squid and the eye of a mammal work in a remarkably similar manner. However, the ways the two eyes are constructed during development are quite different. Differences in structure are constrained by how particular bodies are constructed as the embryo develops. Eyes also bear telltale signs of the fact that there has been a certain amount of jury-rigging in their construction. They are not perfect. They have blind spots, are subject to retinal detachment, glaucoma and macular degeneration, all of which are a function of the history of how the eye has been assembled through time.</p>

<div class="see-also"><img src="http://biologos.org/uploads/questions/mitochondria.jpg">
<p>Read how a recent <strong><a href="http://www.wired.com/wiredscience/2009/08/reduciblecomplexity/" target="_blank">study</a></strong> has shot down the idea that protein transport is irreducibly complex.</p></div>

<p>Although we don’t have the eye intermediates preserved in stone the way we can see the simpler assembly of the parts of the mammalian middle ear, we do have a vast array of eye structures in the animal kingdom, any one of which might appear to be irreducibly complex but which, in fact, has been put together through a set of processes that has included exaptation, co-option, step-by-step adaptation and some redundancy at various stages along the way. Indeed, these eye structures themselves are likely intermediates.  Everything changes as it passes through the eons of time. This is the legacy of creation through the process of natural selection.</p>]]></content:encoded>
        <pubDate>Wed, 22 Apr 09 16:12:02 -0700</pubDate>
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        <title>Are gaps in scientific knowledge evidence for God?</title>
        <link>http://biologos.org/questions/god&#45;of&#45;the&#45;gaps?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/questions/god&#45;of&#45;the&#45;gaps?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Every field of science has unanswered questions and gaps in our understanding.   Scientists typically view these as open research questions.  Others sometimes argue that if science can’t explain how something happened, then God must be the explanation.   Such arguments are called “god&#45;of&#45;the&#45;gaps” arguments.    The risk in these arguments is that science is always developing.  If gaps in scientific knowledge are the basis for belief in God, then as scientists fill in the gaps, the evidence for God disappears.   The God of the Bible, however, is much more than a god of the gaps.  Christians believe that God is always at work in the natural world, in the gaps as well as in the areas that science can explain.</description>
        <content:encoded><![CDATA[<h3>Defining God-of-the-Gaps</h3>
<p>God-of-the-gaps arguments use gaps in scientific explanation as     indicators, or even proof, of God&rsquo;s action and therefore of     God&rsquo;s existence.  Such arguments propose divine acts in place of natural,     scientific causes for phenomena that science cannot yet explain. The assumption     is that if science cannot explain how something happened, then God must be the     explanation. But the danger of using a God-of-the-gaps argument for the action     or existence of God is that it lacks the foresight of     future scientific discoveries.  With the continuing advancement of science,     God-of-the-gaps explanations often get replaced by natural mechanisms.      Therefore, when such arguments are used as apologetic tools, scientific     research can unnecessarily be placed at odds with belief in God.<sup>1</sup> The recent Intelligent Design (ID) movement highlights this problem. Certain ID arguments, like the irreducible complexity of the human eye or the     bacterial flagellum, are rapidly being undercut by new scientific discoveries.</p>
<h3>Illustrating God-of-the-Gaps</h3>
<p>The familiar story of Isaac Newton and Pierre Simon de Laplace is a classic example of the     God-of-the-gaps argument.  Newton devised a mathematical equation for the     force of gravity that he used to explain and predict the motions of planets     with outstanding accuracy.  With pencil and paper, the orbit of the planets     around the sun could be calculated with great precision.  But planets also have     gravitational interactions with each other, not just with the sun.  For     example, when the Earth passes Mars in its orbit around the sun, there is a     small but significant gravitational interaction between Mars and Earth.      Because these tiny interplanetary interactions occur often &mdash; several times per     year in many cases&nbsp;&mdash; Newton suspected that these gravitational perturbations     would accumulate and slowly disrupt the magnificent order of the solar system.     To counteract these and other disruptive forces, Newton suggested that God     must necessarily intervene occasionally to tune up the solar system and     restore the order.  Thus, God's periodic special actions were needed to account for the ongoing stability of the solar system.</p>
<div class="see-also"><img alt="" src="http://biologos.org/uploads/questions/image-question1-thumb.jpg" />
<p>See <a href="/questions/biologos-id-creationism/">&quot;How is BioLogos different from Theistic Evolution, Intelligent Design and Creationism?&quot;</a> and <a href="/questions/complexity-of-life/">&quot;How can evolution account for the complexity of life on earth today?&quot;</a></p>
</div>
<p>Newton also thought that God was necessary to explain how the planets all happen to be travelling around the sun     in the same direction and in the same plane.  His theory of gravity was     entirely compatible with planetary motions in any direction and with orbits tilted at any angle to the sun.  But this is not what we find.  The planets     travel in the same direction, and almost all of their orbits are in the same     plane.  The planets move around the sun like runners on a track: very orderly. Newton thought only God could have set things up so elegantly:</p>
<blockquote>
<p>&quot;The six primary Planets are revolv'd about the Sun, in circles concentric with the Sun, and     with motions directed towards the same parts, and almost in the same plane. [&hellip;]     But it is not to be conceived that mere mechanical causes could give birth to     so many regular motions. [&hellip;] This most beautiful System of the Sun, Planets, and     Comets, could only proceed from the counsel and dominion of an intelligent and     powerful Being.&quot;&nbsp;<sup>2</sup></p>
</blockquote>
<p>In both of these examples &mdash;     one related to the ongoing motion of the planets and the other related to the     origin of the motions &mdash; Newton is employing textbook God-of-the-gaps     reasoning.  Scientific theories are proposed to explain as much as possible,     and then God is brought in to cover any remaining unexplained gaps in the     explanation.</p>
<p>We now know that     Newton was wrong on both counts.  The gravitational perturbations that planets     experience are so completely balanced that they average out to zero over time.      The net result is that the planetary motions are stable; they do not     deteriorate over time.  And it was a straightforward application of Newton&rsquo;s     theory that revealed this.  Newton simply had not done all the calculations to     see if his intuition was right.  The same was true for the orderly motion of     the planets. Newton had no concept of how solar systems could form on their own     or what the planetary motions would be like in naturally forming systems.      Astronomy simply had not developed to this point.  In the decades after Newton,     astronomers discovered that solar systems form naturally from large clouds of     rotating matter. Therefore, a large, slowly rotating cloud collapses under its     own gravity, and it tends to flatten into something like a pancake. Saturn's rings are an interesting example where the cloud is still present. The     material collects into big clumps in the plane of the pancake.  After the process     is completed, a collection of clumps all travelling in the same     direction and in the same plane exists&nbsp;&mdash; just like our solar system.</p>
<p>Such     episodes in the history of science are not unusual.  In fact they are so common     that the phrase God-of-the-gaps has been coined to label the process of     invoking God to account for natural phenomena that is not explained by     science.  The dangers of such God-of-the-gaps reasoning were highlighted a century after Newton by a situation involving the French mathematician Pierre Simon de Laplace who held a     bureaucratic post in Napoleon Bonaparte&rsquo;s administration.  Laplace was the     beneficiary of a remarkable century of progress in refining and extending     Newton&rsquo;s laws of motion and expanding the vision of what was going on in space.     As a result, he was able to write a wide-ranging text explaining the mechanics     of the heavens without invoking divine intervention.</p>
<p>As legend goes, Laplace     was questioned by Napoleon about the absence of God in his theory:<strong> </strong>&quot;M. Laplace, they tell me you have written this large book on the     system of the universe, and have never even mentioned its Creator.&quot; To this, Laplace famously replied, &ldquo;I had no need     of that hypothesis.&rdquo;  Of course, God can be still be used as a hypothesis for     the existence of the universe.  But because Newton had used a deficiency in     scientific explanation as an argument for God&rsquo;s existence, Laplace&rsquo;s theory     delivered an unnecessary blow to the apologetics of the time. Herein lies     the danger: If gaps in scientific knowledge are used as arguments for the     existence of God, what happens when science advances and closes those     explanatory gaps?</p>
<h3>Pointers to God: Fine-Tuning and the Moral Law</h3>
<p>In the first and third chapters     of <em>The Language of God</em>, Dr. Francis     Collins mentions pointers to God that     played a role in his journey to faith.  One of these pointers is the     fine-tuning of the universe.  Fine-tuning refers to the way the basic laws of     physics appear to be delicately balanced for life. This precision calls for an explanation that science     cannot provide.  There is a spirited debate over the meaning of fine-tuning,     and some critics charge that invoking God as the fine-tuner is a return to     the God-of-the-gaps.  But there does not seem to be any way to explain the     detailed properties of the laws of nature from within science.  Fine-tuning     arguments thus go beyond science into metaphysics to explain why the world     that science studies has the properties that it does.  Another pointer that Collins mentions, following     C. S. Lewis, is the moral law. The moral law is an implicit and universal standard of ethics     for humanity. Collins describes morality as a universal law, which, unlike laws     such as gravity, is broken very often.  Overall, the moral law is consistent     with the type of behavior that is expected of products of evolution.  However,     as Collins points out, altruistic behavior often seems to go beyond what would     be<em> </em>expected from the best-established     processes of Darwinian evolution.<sup>3</sup> Mathematical models developed by     theorists like Martin Nowak <sup>4</sup> have established that natural     selection can produce genes for altruism, but the radical self sacrifice of     great saints like Mother Theresa of Calcutta seems to go beyond what the models can account     for.  A completely natural account of our origins may be insufficient to     explain present observations of human behavior.  However, if evolutionary     psychology could explain human morality, or if theoretical physics could     explain such perfect constants of nature, would theistic apologetics be     discredited in any way?</p>
<h4 style="margin-left: 40px;">Fine-Tuning</h4>
<p style="margin-left: 40px;">Unlike a God-of-the-gaps     argument, the argument for fine-tuning uses science without divine action to     reveal the impeccable precision of our Universe.<sup>5</sup> Fine-tuning is described in terms of physical constants     and the initial conditions of our universe.  Fine-tuning does not try to draw     attention to where science has failed, but rather emphasizes how science has     revealed the intricate balance of the universe.</p>
<p style="margin-left: 40px;">One might     argue that science could potentially explain the origins of these delicately     balanced features, but there are two important things to keep in mind.  First,     it is very <em>un</em>likely that a scientific     theory could explain away the improbabilities of our Universe without raising     other improbabilities.<sup>6</sup>&nbsp; Second, an argument for fine-tuning is     unlike a God-of-the-gaps argument in that it is not intended to prove God&rsquo;s     existence.  While it is true that the fine-tuning of the Universe adds credence     to belief in a creator, such recent scientific findings could hardly be called     upon as the basis or justification of the long history of theistic belief.      While the fine-tuning of the Universe <em>does</em> indeed lead many people to consider the possibility of God&rsquo;s existence, the     fact that science cannot disprove God&rsquo;s existence assures us that it also     cannot prove it.  Instead, fine-tuning can be understood as a feature of the universe that is accordant with belief in a creator.  A deeper scientific     explanation of these features &mdash; albeit highly unlikely&nbsp;&mdash;     would not ruin its usefulness as a pointer     to God.</p>
<h4 style="margin-left: 40px;">Moral     Law</h4>
<p style="margin-left: 40px;">The moral law also offers     evidence that the world has evolved in a way that is consistent with the belief     in a good and loving God.  This remains true whether science     eventually finds an account or explanation for morality.  Even if a purely     natural account of moral development could be found, the simple fact that     morality has evolved is something that would be expected in a world created by     a just and loving God.</p>
<p style="margin-left: 40px;">Evolutionary     theory explains selfishness in a most obvious and natural way.  Altruism is far     less obvious, but it can also be explained by recognizing that humans evolved     in tribes that were essentially extended families with many genes in common.      Imagine two tribes, one has genes to help each other even when it     requires sacrifice and one does not have such genes.  Which tribe will flourish? In     such ways, genes for altruism can be selected by nature and spread in a     population.  But in its most radical form, altruism refers to situations where     individuals risk their very lives to help someone they do not even know, and     from whom a reciprocal benefit is unexpected or even unimaginable.  This     concept runs counter to the behavior expected from the best-established     processes of evolution, and there are no widely accepted theories that can     fully account for such examples.  Some have suggested that radical altruism     might perhaps be explained as misfiring &mdash;&nbsp; we mistakenly go overboard in our desire to be nice. Radical altruism is currently somewhat mysterious.</p>
<p style="margin-left: 40px;">As with most situations, science     may someday provide an explanation for altruism.  In light of that possibility,     the argument from the moral law as a pointer to God is subject to the same risk of explanation as Newton&rsquo;s     God-of-the-gaps argument. If radically altruistic behavior     is someday given a natural evolutionary explanation, it will no longer stand out as an inconsistency in     evolutionary theory.  However, Robert Wright argues in <em>Non-Zero: The Logic of Human Destiny</em>,     that the evolution of altruism can be explained as an application of game     theory.<sup>7</sup> In Wright&rsquo;s view, the deep mystery is     not altruism itself, but the intriguing mathematical structures of the     universe, like game theory, that can <em>coax</em> from the universe surprising behaviors like altruism.</p>
<!--WAIT UNTIL 29 and 33 EXIST<div class="see-also"><img src="http://biologos.org/uploads/questions/image-question11-thumb.jpg" /><p>See <strong><a href="#">"Can evolution explain morality?"</a></strong> and <strong><a href="#">"If human morality is an evolutionary artifact, where does that lead us?"</a></strong></p></div>-->
<h3>Conclusion</h3>
<p>If gaps in scientific knowledge     are the basis for belief in God, then as science progresses, evidence for God&rsquo;s     existence continually diminishes.  Fine-tuning does not rely on divine action     as an explanation, but points out the striking precision of nature&rsquo;s     order in line with the requirements for human life, thus establishing a     mysterious connection between physics and biology.  As for the moral law, its     use as a pointer to God can be understood in that human behavior has evolved in     a way that is consistent with the idea of a good and loving creator.  Belief in     any moral truth rests upon the assumption of God&rsquo;s existence or some other     ultimate standard.</p>
<p>Finally, although these pointers to God should encourage one to     consider God&rsquo;s existence, they must not be placed at the foundation of faith.      The belief in a creator and the experience of a relationship with God should     not rest solely on a logical or scientific justification.  But then, as Collins     himself wondered, &ldquo;How can such [religious] beliefs be possible for a     scientist? Aren&rsquo;t many claims of religion incompatible with the &ldquo;Show me the     data&rdquo; attitude of someone devoted to the study of chemistry, physics, biology,     or medicine?&rdquo;<sup>8</sup>&nbsp;&nbsp;</p>
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        <title>How is BioLogos different from Evolutionism, Intelligent Design, and Creationism?</title>
        <link>http://biologos.org/questions/biologos&#45;id&#45;creationism?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
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        <description>We at BioLogos believe that God used the process of evolution to create all the life on earth today.   While we accept the science of evolution, we emphatically reject evolutionism.  Evolutionism is the atheistic worldview that says life developed without God and without purpose.   Instead, we agree with Christians who adhere to Intelligent Design and Creationism that the God of the Bible created the universe and all life.  Christians disagree, however, on how God created.  Young Earth Creationists believe that God created just 6,000 to 10,000 years ago and disagree with much of mainstream science. Supporters of Intelligent Design accept more of evolutionary science, but argue that some features of life are best explained by direct intervention by an intelligent agent rather than by God&apos;s regular way of working through natural processes.    We at BioLogos agree with the modern scientific consensus on the age of the earth and evolutionary development of all species, seeing these as descriptions of how God created.  The term BioLogos comes from the Greek words bios (life) and logos (word), referring to the opening of the Gospel of John.  “In the beginning was the Word, and the Word was with God, and the Word was God.  He was with God in the beginning.  Through him all things were made.”
(Updated on March 1, 2012)</description>
        <content:encoded><![CDATA[<h3>The BioLogos View</h3>
<p>The BioLogos view holds that both Scripture and modern science reveal God’s truth, and that these truths are not in competition with one another. While there are varying views within the BioLogos community of <em>how</em> to reconcile the truths of science and Scripture on particular issues (for example with regards to a historical Adam<a href="#1"><sup>1</sup></a>),  we believe that the Bible is the divinely inspired and authoritative Word of God. BioLogos accepts the modern scientific consensus on the age of the earth and common ancestry, including the common ancestry of humans.</p>
<div class="see-also"><img src="http://biologos.org/uploads/static-content/psuedogenes_series.jpg" alt="" height="95" width="70"  />See more on <a href="http://biologos.org/questions/category/scientific-evidence">Scientific Evidence</a></div>

<h3>Evolutionism</h3>
<p>While BioLogos accepts evolution, it emphatically rejects <em>evolutionism</em>, the atheistic worldview that so often accompanies the acceptance of biological evolution in public discourse. Proponents of evolutionism believe every aspect of life will one day be explained with evolutionary theory. In this way it is a subset of <em>scientism</em>, the broader view that the only real truth is that which can be discovered by science. These positions are commonly held by <em>materialists</em> (also called <em>philosophical naturalists</em>) who deny the existence of the supernatural.</p>

<p>The BioLogos view celebrates God as creator. It is sometimes called Theistic Evolution or Evolutionary Creation. <em>Theism</em> is the belief in a God who cares for and interacts with creation. Theism is different than <em>deism</em>, which is the belief in a distant, uninvolved creator who is often little more than the sum total of the laws of physics. Theistic Evolution, therefore, is the belief that evolution is how God created life.</p>

<p>Because the term <em>evolution</em> is sometimes associated with atheism, a better term for the belief in a God who chose to create the world by way of evolution is <em>BioLogos</em>. BioLogos comes from the Greek words <em>bios</em> (life) and <em>logos</em> (word), referring to John 1:1: “In the beginning was the Word, and the Word was with God, and the Word was God.”</p>

<div class="see-also"><img src="http://biologos.org/uploads/questions/image-question14-thumb.jpg" alt="" height="76" width="70"  />See <a href="http://biologos.org/questions/evolution-and-divine-action/">"What role could God have in evolution?"</a></div>

<h3>Intelligent Design</h3>
<p>Contrary to some interpretations, Intelligent Design, or ID, makes no specific theological claims. Instead, proponents of ID argue that “certain features of the universe and of living things are best explained by an intelligent cause, not an undirected process such as natural selection,"<a href="#2"><sup>2</sup></a> and that the existence of this intelligent cause is a testable scientific hypothesis. Furthermore, ID theorists attempt to show that intelligent causation is the best explanation for certain phenomena such as irreducibly complex systems (e.g. bacterial flagella) and the complex specified information in DNA.</p>

<p>Those who hold the BioLogos view also believe in intelligent causation. The universe and all that is in it has been created and is being sustained by God:</p>

<blockquote><p>…in [Christ] all things in heaven and earth were created, things visible and invisible…all things were created through him and by him. He himself is before all things, and in him all things hold together. (Col 1:16,17 NRSV).</p></blockquote>

<p>BioLogos differs from the ID movement in that we have no discomfort with mainstream science. Natural selection as described by Charles Darwin is not contrary to theism. Similarly, we are content to let modern evolutionary biology inform us about the mechanisms of creation with the full realization that all that has happened occurs through God’s activity. We celebrate creation as fully God’s. We marvel at its beauty and are in awe that we have the privilege of experiencing it.</p>

<p>BioLogos celebrates the reality of miracles, including the miracles of Scripture, but also those we experience in today’s world through answered prayer and the work of the Holy Spirit in our own lives. However, the demonstration of such supernatural activity in the history of the natural world is, we think, unlikely to be scientifically testable.</p>

<div class="see-also"><img src="http://biologos.org/uploads/questions/image-question11-thumb.jpg" alt="" height="76" width="70"  />See <a href="http://biologos.org/questions/biologos-and-miracles/">"Is there room in BioLogos to believe in miracles?"</a></div>

<p>To summarize, BioLogos differs from the ID movement in three respects:</p>

<ol><li>We are skeptical about the ability of biological science to prove the existence of an Intelligent Designer (whom we take to be the God of the Bible), while ID advocates are confident.</li>
<li>We find unconvincing those attempts by ID theorists to scientifically confirm God’s activity in natural history, while ID theorists believe they have sufficiently demonstrated it.</li>
<li>We see no biblical reason to view natural processes (including natural selection) as having removed God from the process of creation. It is all God’s and it is all intelligently designed. Those in the ID movement for the most part reject some or all of the major conclusions of evolutionary theory.</li></ol>

<h3>Creationism</h3>
<p>BioLogos affirms that the earth and the universe were created. Creationism, however, generally refers to the belief that life on earth is a result of a direct flurry of supernatural intervention in a manner that is concordant with a highly literal view of Genesis 1-3. There are two main varieties of Creationists, those who believe the earth is young and those who believe it is old.</p>

<p>Young Earth Creationists (YECs) hold that the earth is between 6,000 and 10,000 years old, a figure derived from the genealogies presented in the Bible. YECs believe the most faithful way to read Scripture is through the lens of a literal six-day creation as presented in the first chapter of Genesis, and they further believe that a literal worldwide flood as depicted in Genesis 6-9 is responsible for geological features of the earth and the fossil record. YECs also reject the common ancestry of all species, believing that life was created as it presently appears by supernatural action. They view “macro-evolution” (as distinct from within-kind or within-species “micro-evolution”) as incompatible with Scripture and some even argue that it is a direct threat to Christianity.</p>

<p>BioLogos disagrees with the YEC viewpoint.  This view rejects the discoveries of almost every modern scientific discipline to arrive at its conclusions and overlooks the revelation of God’s work in creation as uncovered by science. We also maintain that the YEC viewpoint stems from a particular interpretation of Genesis that ignores the rich cultural and theological context in which it was written.</p>

<div class="see-also"><img src="http://biologos.org/uploads/questions/image-question7-thumb.jpg" alt="" height="76" width="70"  />See more on <a href="http://biologos.org/questions/category/scripture-interpretation">Scripture Interpretation</a></div>

<p>Old Earth Creationists (OECs) accept that the earth and universe are billions of years old, but maintain that these findings are in concordance with a literal reading of the first chapters of Genesis (often by interpreting the days of creation as long periods of time, or by understanding large gaps between the days of creation). OECs hold that modern science tightly corresponds with biblical accounts and assume that God included modern scientific ideas in the Bible, sometimes through secret language that would have been lost on the original audiences. OECs do not accept macro-evolution and the common ancestry of all life forms.</p>

<p>BioLogos disagrees with the OEC viewpoint.  While accepting the scientific consensus for an old earth, this view rejects the findings of modern genetics, paleontology, developmental biology, evolutionary biology and many other biological sub-disciplines that make little sense apart from macro-evolution and common ancestry. Furthermore, we believe that God chose to reveal himself within the worldview, culture, and language of the biblical authors.</p>

<h3>Where Christians Agree</h3>
<p>Despite these differences, all Christians agree that the God of the Bible is the creator of the heavens and the earth. We agree on the authority of the Bible, even though we disagree on the best interpretation of particular passages. We agree that God is continually active in his sovereign governance of the universe, even though we disagree on how much God acts through natural law versus miracles. We are unified in our rejection of evolutionism, even though we use different strategies to counteract it (some reject the science of evolution, while BioLogos rejects the atheistic spin put on the science). We agree on the fundamentals of our faith:  that all people have sinned and that salvation comes only through the death and resurrection of Jesus Christ. We agree that the God of our salvation is the same God we see in the wonders of his creation.  Whether we ponder the intricacy of DNA, the beauty of a dolphin, or the vastness of the Milky Way, we can lift our hearts together in praise to the divine Artist who made it all.</p>
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