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        <title>Custom Feed &#45; The BioLogos Forum</title>
    <link>http://biologos.org/resources/find/Blog/sort&#45;by&#45;Newest/sort&#45;by&#45;Newest/Fossils,The Flood?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
    <description>This is a custom feed of BioLogos resources. Make a new feed at http://biologos.org/resources/find</description>
    <dc:language>en</dc:language>
    <dc:rights>Copyright 2013</dc:rights>
    <dc:date>2013-05-23T20:22:49-08:00</dc:date>    
    
    

            
            
        
      <item>
        <title>A Scientific Commentary on Genesis 7:11</title>
        <link>http://biologos.org/blog/a&#45;scientific&#45;commentary&#45;on&#45;genesis&#45;711?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/a&#45;scientific&#45;commentary&#45;on&#45;genesis&#45;711?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Although committed to the principle of sola Scriptura, Calvin recognized that the Bible would have been written in terms its original recipients would have understood. Calvin inherited the medieval cosmology of his time, a way of viewing the world heavily influenced by Greek thought and one which was about to receive shocks from astronomers such as Copernicus and Galileo. But not just yet.</description>
        <content:encoded><![CDATA[<p><strong>Genesis 7:11</strong>: In the six hundredth year of Noah's life, in the second month, on the seventeenth day of the month, on that day all the fountains of the great deep burst forth, and the windows of the heavens were opened.</p>

<p><strong>Genesis 8:1</strong>: But God remembered Noah and all the wild animals and all the domestic animals that were with him in the ark. And God made a wind blow over the earth, and the waters subsided; 2 the fountains of the deep and the windows of the heavens were closed, the rain from the heavens was restrained, 3 and the waters gradually receded from the earth.</p>

<hr />

<p>The Flood narrative of Genesis 7-9 has played a prominent role in science and religion debates for over three hundred years and gave rise in earlier centuries to geological theories such as old earth catastrophism. While literary studies have uncovered the chiastic structure of the Flood story (see Gordon Wenham, “The Coherence of the Flood Narrative” Vetus Testamentum 28 (1978):336-48) and with it the theological pivot point of the entire narrative (Gen. 8:1 – “And God remembered Noah…), much of the popular attention remains on the questions regarding details (Is there THAT much water in the world to cover ALL the mountains to a depth of 15 cubits? Could you really fit two or seven of every animal species in an ark that size?) </p>

<p>Looking at a smaller matter, we find at the beginning and the middle of the narrative indications of an ancient Near Eastern worldview. As the story is told, the flood was not merely the result of excessive rain, but actually the convergence of the waters above the earth with the waters below the earth. It is, as one translation puts it, as if the sluice gates at the deep and of the heavens were thrown open and water poured in from above and below. This is a consistent picture from the Old Testament of a three-tiered universe—a dome above the earth holding back the heavenly waters, a flat earth with water on its surface, and water under an earth which is held up by pillars. </p>

<p>That the story is told using the cosmology of its time should not be unduly unsettling, nor that the story is reinterpreted as new understandings of the universe come into favor. By way of example, consider John Calvin and his understanding of the structure of the universe. Although committed to the principle of sola Scriptura, Calvin recognized that the Bible would have been written in terms its original recipients would have understood.   </p>

<p>Calvin inherited the medieval cosmology of his time, a way of viewing the world heavily influenced by Greek thought and one which was about to receive shocks from astronomers such as Copernicus and Galileo. But not just yet. Calvin still subscribed to the common conception of his day in which the four elements—earth, air, fire, and water—comprised the earthly sphere and possessed unique characteristics. The nature of air and fire was to rise, while the nature of earth and water is to sink.  Earth, being heavier than water, should sink to the center of the cosmos and water should compose the next layer. Both earth and water are spherical, i.e., naturally form spherically around the cosmic center. Thus the heavier spherical element of earth should be encased entirely within the lighter spherical element of water.</p>

<p>Notice what this does to the flood story. For Calvin, the amazing thing is that the world isn’t constantly under water and subject to flooding. In the cosmology of Calvin’s day, it does not take an act of God to cause a universal flood, but rather an actively present and restraining hand of God to keep the waters back in everyday circumstances and make inundation by water something other than universal. </p>

<p>Obviously, Calvin was wrong. Or perhaps we should say that medieval cosmology was flawed and justifiably gave way to new conceptions of the universe. The answer is not to return to an ancient Near Eastern cosmology, but to reinterpret cautiously within new and better cosmologies and to pay closest attention to the text and the theology of scripture.  </p>

<p>The geological and planetary sciences bring their own unique contributions and are of more interest than the latest expedition to discover the ark on Mt. Ararat. Is the flood story a universalization of a catastrophic regional event that burned itself into the psyche of ancient cultures in the Mediterranean basin? Various theories regarding a Black Sea venue for a catastrophic flood event are still in process of being sorted out. It’s intriguing. Or the question where the water on Planet Earth comes from? Was it always here as an emanation of vapors from the earth’s crust in its early formation, or has it accumulated over eons through the steady bombardment of earth by small, icy comets? It’s an intriguing scientific question that is in the midst of determination through testing.</p>

<h3>Preaching Suggestions</h3>

<p>When preaching on the story of the Flood, it is easy to get lost in the debates over particulars. As mentioned elsewhere, to tackle all the peripheral issues threatens to turn a sermon into a geology lecture. Other settings are better suited to addressing those questions, and those are best addressed open-endedly. </p>

<p>A brief explanation of ancient Near Eastern cosmology can be helpful to contextualize the story. If there are those who are tempted to think that a cosmology embedded in the Bible must be inspired and definitive, one can note that cosmology has changed by the New Testament. The Bible itself isn’t wed to a particular structure of the universe. </p>

<p>What is important is to keep the theology of the text front and center, and in that theology there are at least three non-negotiables from the flood narrative. First, human sin and violence threatens to undo a good creation (the flood is a de-creation event, a return of the waters mentioned in Genesis 1:2). Second, God remembers Noah, and never forgets his promises. Third, the end of the flood is a covenant with the whole earth regarding the stability and endurance of the natural order.
</p>]]></content:encoded>
        <pubDate>Tue, 05 Feb 13 08:00:43 -0800</pubDate>
        <dc:creator>Rolf Bouma</dc:creator>
        <!--<dc:date>Feb 05, 2013 08:00</dc:date>-->
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        <title>Where are the Transitional Fossils?</title>
        <link>http://biologos.org/blog/where&#45;are&#45;the&#45;transitional&#45;fossils?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/where&#45;are&#45;the&#45;transitional&#45;fossils?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>A common argument leveled against the theory of evolution is that scientists have not been able to produce transitional fossils that show the change of one species into another.  In this podcast, we address a common misconception about what transitional fossils actually are.</description>
        <content:encoded><![CDATA[<p align="center"><iframe src="http://player.vimeo.com/video/31875051?title=0&amp;byline=0&amp;portrait=0" width="570" height="428" frameborder="0" webkitAllowFullScreen allowFullScreen></iframe></p>

<p>A common argument leveled against the theory of evolution is that scientists have not been able to produce the expected transitional fossils that show the change of one species into another. If evolution were true, wouldn’t there be instances of clear intermediary species, like, for example, a species that was half whale and half hippo to show the transition between those two? In this BioLogos podcast, Kelsey Luoma addresses this misconception about what a transitional fossil actually is. Rather than a mix between two related species, transitional fossils point back to the common ancestors that modern species share. The fact is that the number of transitional species is massive and it grows with each passing year.  Given the rarity with which organisms are actually fossilized, the amazing thing is actually the completeness of the fossil record, not its incompleteness.  The transitional species story strongly supports, and certainly does not disprove, evolutionary theory. <sup>1</sup></p>

<p class="date">1. To hear the full audio clips which have been referenced go to:</p>
<ul><li><a href="http://www.youtube.com/watch?v=X6EmOQLf25s&feature=BFa&list=PLACF41F3DDBCA4565&lf=results_video&noredirect=1" target="_blank">Rational Response Debate with Kirk Cameron (from Way of the Masters)</a></li>
<li><a href="http://www.youtube.com/watch?v=FN9wyn9xVko&feature=related" target="_blank">Behind the Scenes with Dr. Neil Shubin (from Cincinnati Museum Center)</a></li>
<li><a href="http://www.youtube.com/watch?v=fVNXXLLUYFM' target="_blank">Mark Norell Publishes New Archaeopteryx Findings (from American Museum of Natural Sciences)</a></li>
<li><a href="http://www.youtube.com/watch?v=VmtDGjfMajM" target="_blank">Texas A&M Professor Discusses Findings of Autralopithecus Sediba and its Relationship to Humans (from Texas A&M University)</a></li>
<li>Intro/outro music composed by Martin Minor (<a href="http://www.looperman.com/users/profile/159051" target="_blank">Minor2Go</a>).</li> </ul> </p>

<p><strong>An audio only version of the podcast can be downloaded <a href="http://biologos.org/uploads/resources/fossil_podcast_final.mp3" target="_blank">here</a>.</strong></p>
]]></content:encoded>
        <pubDate>Fri, 01 Feb 13 08:57:28 -0800</pubDate>
        <dc:creator>Kelsey Luoma</dc:creator>
        <!--<dc:date>Feb 01, 2013 08:57</dc:date>-->
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            <item>
        <title>Series: The Human Fossil Record</title>
        <link>http://biologos.org/blog/series/human&#45;fossil&#45;record?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/human&#45;fossil&#45;record?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this series, James Kidder provides an intriguing study on transitional fossils and the evolutionary history of modern humans.  He begins by discussing the fossil record, explaining how new forms are classified. He then explains the physically distinguishing trait of humankind—bipedalism.  From the discovery of Ardipithecus, the earliest known hominin, to the australopithecines, the most prolific hominin, Kidder focuses on the discovery, the anatomy, and the interpretation of these ancestral remains.</description>
        <content:encoded><![CDATA[<p class="intro">This blog was originally posted on December 10, 2010. We think it was an important one.  Note though that it was posted shortly before the discovery of <a href="http://biologos.org/blog/a-geneticists-journey.html" target="_blank">Denisovans.</a>  So now one more red bar needs be added to the figure above.</p>

<h3>Transitional Fossils</h3>

<p>Some time ago, the Discovery Institute’s Casey Luskin <a href="http://www.evolutionnews.org/2010/03/smithsonians_new_human_origins033371.html" target="_blank">commented</a> on the human origins exhibit at the Smithsonian Institution, suggesting that palaeoanthropologists use evolutionary theory to describe the progression of the human lineage even when they don’t have transitional fossils with which to work.  He writes:</p>

<blockquote><p>What's ironic, however, is that if you ask the question How Do We Know Humans Evolved? the answer you’re given is, “Fossils like the ones shown in our Human Fossils Gallery provide evidence that modern humans evolved from earlier humans.” So whether you find fossils or you don’t, that’s evidence for evolution.</p></blockquote>

<p>Indeed, it has become an article of faith for those espousing both the young earth creation (hereafter YEC) model and many who hold to the intelligent design model that transitional fossils do not exist and therefore evolution has not taken place.  Support for this position usually entails attacking the weak areas of the fossil record, where burial processes have left us little with which to work, or the creation of straw men arguments in which transitional fossils are defined in such a way that none could ever be found.  Often this centers on the concept of “missing link,” a term that is habitually used in the popular press and young earth creation and intelligent design literature when referring to fossil remains but which has little to no meaning for biologists or palaeontologists.  As Ahlberg and Clack (Ahlberg and Clack 2006) write:</p>

<div class="see-also" id="phylo" style="display:none;">Phylogenetics is the study of evolutionary relatedness among organisms.</div>

<blockquote><p>But the concept has become freighted with unfounded notions of evolutionary ‘progress’ and with a mistaken emphasis on the single intermediate fossil as the key to understanding evolutionary transitions. Much of the importance of transitional fossils actually lies in how they resemble and differ from their nearest neighbours in the <a onmouseover="toggle_visibility('phylo');" onmouseout="toggle_visibility('phylo');">phylogenetic</a> tree, and in the picture of change that emerges from this pattern.</p></blockquote>

<p>Contrary to common misconceptions, the fossil record does not record one single lineage for any family of organisms but rather a series of branches, with many related species coexisting synchronously.  Darwin hypothesized that the evolutionary record reflected this bushiness and drew such a diagram in his journal.    At the time, though, he had little in the way of fossil evidence to back up this position.  Much has changed since his day.</p>  

<p align="center"><img src="http://biologos.org/uploads/static-content/kidder_Figure_1.jpg"></p>

<p>An analogy for understanding this “bushiness” was best described by Prothero and Buell (Prothero and Buell 2007).  They suggest that the reader consider his or her own genealogy.  You and your siblings are the direct descendents of your parents and, while you are similar to them, each of you has different characteristics not shared with them as well as characteristics that you do share.  Your parents have siblings as well (your aunts and uncles), and your grandparents are their last common ancestors. These siblings have their own children (your cousins), who have different and similar traits relative to their parents.  They are broadly recognizable as being related to you (“oh, I see you have Aunt Edna’s nose”) but three or four generations out, they will become less and less so.  These are the “nearest neighbours” that Ahlberg and Clack describe. In this analogy, each of these cousins represents a transitional form from what was (your grandparents) to what <em>will be</em> down the road.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/kidder_figure_3.jpg"></p>

<p>For example, no one would confuse a frog with a salamander but if you trace the fossil record of each back in time, eventually you encounter a fossil, <em>Gerobatrachus hottoni</em> which was recently discovered (Anderson et al. 2008) that is best described as a “frogamander,” having the basal characteristics of both frogs and salamanders. Had we seen such an animal at the time, it is likely we would not have found it remarkable because it would have resembled the species around it.  One lineage eventually diverged into frogs, salamanders and other amphibians.  Most (just like Darwin proposed in his tree diagram with the little hatch marks at the tip of many branches) went extinct.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/kidder_Figure_2.jpg"></p>

<h3>Taxonomy and the Beginnings of Human Origins</h3>

<p>All life is classified based on a system devised by Carolus Linneaus in 1735 in his remarkable work <em>Systema Naturae</em>.  This system gives all recognized species an individual place based on a system of hierarchy. The study of classification is known as taxonomy.  A taxonomic ranking for humans would be this:</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/kidder_figure_5.jpg"></p>

<p>When a fossil is excavated, the first thing that the palaeontologist does is make a taxonomic assessment of where it fits in a sequence of known fossils.  Traits that are shared with other like species or genera are referred to as primitive traits.  Examples of this in humans are five fingers and the presence of three arm bones.  We share this with all mammals.  Traits that are new or are not shared with other like species are referred to as derived traits.  Examples of this in humans are the skeletal changes in the pelvis and the foot to allow for walking upright.  We do not share these with any other primates.</p>

<p>Transitional fossils in the human fossil record are distinguished at both the genus and species level.  This group includes the extinct genera <em>Ardipithecus</em> and <em>Australopithecus</em> and the current genus <em>Homo</em>.  All species except <em>Homo sapiens</em> are extinct.  Much of the recent study of early humans focuses on the transition from <em>Ardipithecus</em> (‘Ardi’) to <em>Australopithecus</em> (‘Lucy’ and similar fossils) and from <em>Australopithecus</em> to <em>Homo</em>, the genus that led eventually to us.  While each of the australopithecine species identified in the fossil record has derived characteristics that separate them from their ancestors and from each other, only one led to the genus <em>Homo</em>.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/kidder_Figure_4.jpg"></p>

<p>In future posts, I will describe the evidence for human evolution and why this evidence is compelling.  It suggests that we have had a long, varied history filled with great leaps of change, crushing defeat, and eventual expansion into all areas of the globe.</p>

<h3>Notes</h3>
<p>Ahlberg, P. & J. Clack (2006) A firm step from water to land. <em>Nature</em>, 440.</p>
<p>Anderson, J. S., R. R. Reisz, D. Scott, N. B. Frobisch & S. S. Sumida (2008) A stem batrachian from the Early Permian of Texas and the origin of frogs and salamanders. <em>Nature</em>, 453, 515-518.</p>
<p>Prothero, D. & C. Buell. 2007. <em>Evolution: What the fossils say and why it matters</em>. Columbia Univ Pr.</p>
]]></content:encoded>
        <pubDate>Mon, 21 Jan 13 06:35:46 -0800</pubDate>
        <dc:creator>James Kidder</dc:creator>
        <!--<dc:date>Jan 21, 2013 06:35</dc:date>-->
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        <title>Surveying George Murphy&apos;s Theology of the Cross</title>
        <link>http://biologos.org/blog/surveying&#45;george&#45;murphys&#45;theology&#45;of&#45;the&#45;cross?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/surveying&#45;george&#45;murphys&#45;theology&#45;of&#45;the&#45;cross?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>If God himself is willing to die, particularly in such a gruesome way, then perhaps we should at least consider the possibility of God allowing the death of other creatures, too. But would this really be compatible with what we know of God through Scripture?</description>
        <content:encoded><![CDATA[<p style="margin: 0px 30px 0px 30px;"><em>Truly, I say to you, unless a grain of wheat falls into the earth and dies, it remains alone; but if it dies, it bears much fruit</em>. —John 12:24</p>

<h3>Introduction</h3>

<p>One of the reasons that some of us are hesitant to accept evolutionary creation is that it seems to make God responsible for the suffering and death of innumerable creatures over millions of years—before humans ever existed or sinned against their creator.  Since we believe in and worship a God who is loving, benevolent, and all-powerful, it sounds quite implausible that our God would have created a world like that; therefore, any scientific evidence for evolution <em>must</em> be incorrect.</p>

<p>Other people look at the scientific evidence for evolution and find a compelling case that it has taken place during our earth's history.  On this basis they may conclude that if evolution is true, then the belief in an all-powerful, perfectly good God must be false!</p>

<p>The trouble with both of these views is that they tend to invoke a completely abstract, philosophical god, not the living God of the Bible—the God who became a human being, experienced unimaginable suffering, and died in a grotesque and humiliating public display.  The death of Jesus completely defied the expectations (and common sense) of his followers, as well as the expectations of any “rational” understanding of the way the Creator of the universe should act in the world.  On the cross, in the person of Jesus, God took upon himself far more suffering than any creature has ever experienced.</p>

<p>If God himself is willing to die, particularly in such a gruesome way, then perhaps we should at least consider the possibility of God allowing the death of other creatures, too.  But would this really be compatible with what we know of God through Scripture?  In this essay, we will explore this quandary through a “theology of the cross”, a concept articulated by pastor George Murphy in his book <em>Cosmos in the Light of the Cross</em>.<sup>1</sup> </p>

<h3>Theology of the cross</h3>

<p>Before we jump into the theological problems associated with evolution, let’s take a look at how we understand Christian theology itself.  For the reformer Martin Luther, any theology (or science) that tries to reach knowledge of God apart from the cross is bad theology.<sup>2</sup>  Instead, Luther pointed to a <em>theologia crucis</em>, in which the true God is seen first and foremost “through suffering and the cross”. To make his point even clearer, Luther insisted that “the CROSS alone is our theology”.<sup>3</sup>   It is the lens through which we view <em>everything</em>.</p>

<p>Of course Martin Luther, having lived in the 16th century, was not aware of the vast history of life on our planet (or any other aspect of modern science, for that matter), but George Murphy draws from Luther’s teachings the foundation that all human knowledge begins with the Word made flesh and crucified.<sup>4</sup>   With the cross of Christ as the ultimate framework through which we view reality, we are bound to view the processes of nature quite differently.  As Murphy explains it,</p>

<blockquote>A theology of the cross is an explication of belief in a God who becomes a participant in the history of the universe and thereby shares in the suffering, loss, and death that are part of worldly experience.<sup>5</sup></blockquote>

<p>God does not sit idly by and watch unaffected as his creatures suffer, but neither does he swoop in and make everything completely effortless and easy.  Instead he chose another way, the crucifixion of Jesus—certainly not the approach that we would have preferred! The apostle Peter went so far as to try to talk Jesus out of it, but he was met with a stern rebuke (Matthew 16:21-23).</p>

As humans, we are inclined to recoil in horror at the idea of God being closely associated with the death.  Yet in the crucifixion we are forced to think of death and God together.  Jesus himself did not draw back from immense pain and suffering, but instead works <em>in</em> it and <em>through</em> it to accomplish his plans. In the cross we learn who God is, the One who brings new life from death (and ultimately conquers death completely).<sup>6</sup> 

<h3>Why is evolution so disconcerting to Christians?</h3>

<p>The problem of suffering throughout all of human history is troubling enough for us to reconcile with a loving, personal God.  But in addition to that, the discovery of vast numbers of fossils reveals that death has taken place on a far greater scale than we had ever imagined.  Both the wide variety of extinct creatures and their sheer numbers is quite staggering, and it raises questions about our Creator:</p>

<blockquote>The picture of a God who is immune from suffering and death but who forces organisms through millions of generations and extinction is disturbing to those who believe in a God of love.<sup>7</sup></blockquote>

<p>The mass extinction of life on earth was already well established by the early 19th century—decades before Darwin’s research—and extinction can be empirically verified independent of any theory of evolution.<sup>8</sup>   The fact that the earth’s crust is a veritable graveyard of long-lost creatures is deeply troubling, and as late as the 1790’s, distinguished intellectuals such as Thomas Jefferson denied the very possibility of extinction.<sup>9</sup></p>

<p>But in addition to the reality of species extinction, the theory of evolution by natural selection proposes that new species also arise in an environment containing widespread pain and death.  Both the creatures that are now living and those that are gone are tainted by an “acrid smell of death”.<sup>10</sup>  It makes us wonder, if our Creator is not the God of the dead, but of the living (Mk. 12:27), where is God’s presence in the evolutionary picture?</p>

<p>In all honesty, creation through evolution is not what we would <em>expect</em> from God, but Scripture is full of examples in which God acts in unexpected ways.  After all, God’s choosing to undergo an agonizing death on a cross is not what we would expect from the all-powerful Creator of the universe, either.  In both cases, new life comes about through pain, suffering, and death.  As George Murphy puts it,
</p>

<blockquote>A priori ideas about God have to be overcome, and God's character has to be learned from God's self-revelation.<sup>11</sup></blockquote>

<p>God’s fullest self-expression is in Jesus Christ himself, one who is intimately familiar with and personally endured creaturely pain and death.  The theology of the cross reveals that God's self-revelation takes place in situations of suffering, loss, and apparent hopelessness, much like situations that occur through natural selection.<sup>12</sup></p>

<h3>The crucifixion is disconcerting too</h3>

<p>Not only is creation through evolution an unexpected and unsettling process, but so is the crucifixion of Jesus!  Killing someone by hanging them on a cross is an unbearably painful, prolonged, humiliating form of death. It was such a horrific type of public execution that it wasn't until after the Roman Empire stopped the practice of crucifixion—and people no longer witnessed it personally—did the cross become a visual object of devotion.<sup>13</sup> Our culture is sufficiently removed from crucifixion that we are desensitized to its original significance, but to connect it to our current context, imagine the reaction you would get by wearing jewelry designed to look like an electric chair.<sup>14</sup></p>

<p>Once we are more attuned to the brutality of crucifixion, it seems all the more striking that the cross is the sign of God’s work, what George Murphy calls “the trademark of God”.<sup>15</sup>   The suffering and death of Jesus is featured prominently in the Gospels, but the crucifixion-resurrection pattern is strongly resonant within the Old Testament, too.  Israel suffered and toiled as slaves in Egypt for centuries before they were rescued in the Exodus, bringing life to a people who were spiritually dead.  Centuries later, the nation of Israel would experience death again when the Babylonians destroyed the Davidic monarchy, burned their Temple, killed their people, and sent many into exile.<sup>16</sup>  Neither Israel (God’s chosen people) nor Jesus (God’s own son) were spared from death and suffering; rather, suffering seems to have been the way in which God re-forms and renews humanity to fully bear His own image.</p>

<h3>Redemption extends to all of creation</h3>

<p>Fortunately, God’s story does not end with death.  God gives new life after his creatures have been subjected to terrible circumstances.  Redemption was promised to Israel itself—Ezekiel’s vision of the valley of dry bones describes how God would renew His chosen people (Ezek 37:1-14).  Later, the astonishing resurrection of Jesus made salvation possible not only for Jews, but for all people in Christ (Gal 3:26-29).  Ultimately, the New Testament makes it clear that God’s renewal will encompass the entire Creation:</p>

<blockquote>For God was pleased to have all his fullness dwell in him, and through him <strong>to reconcile to himself all things, whether things on earth or things in heaven</strong>, by making peace through his blood, shed on the cross. (Colossians 1:19-20)</blockquote>  

<blockquote>With all wisdom and understanding, he made known to us the mystery of his will according to his good pleasure, which he purposed in Christ, to be put into effect when the times reach their fulfillment—<strong>to bring unity to all things in heaven and on earth</strong> under Christ. (Ephesians 1:8-10)</blockquote>

<p>Christians are accustomed to thinking of the death of Christ in regard to humans, but our culture rarely acknowledges God plan for the redemption of His entire creation.  This is partly attributable to the fact that discussions of creation and origins are often separated from the topic of salvation.<sup>17</sup>   In doing so we tend to marginalize Jesus as we argue about Genesis.  Rather than fall into this trap, if we view nature through a theology of the cross, we will see Christ as both the alpha and the omega point in discussions of life’s history and life’s future.  With this perspective, we are more apt to sense our solidarity with the rest of creation as we wait in eager anticipation of a glorious future:</p>
	
<blockquote>The creation waits in eager expectation for the children of God to be revealed. For the creation was subjected to frustration, not by its own choice, but by the will of the one who subjected it, in hope that the <strong>creation itself will be liberated from its bondage to decay and brought into the freedom and glory of the children of God</strong>. (Romans 8:19-21)</blockquote>

<h3>Conclusion</h3>

<p>As part of the Church’s conversation about the problem of natural evil, this essay is meant to be a brief introduction to a “theology of the cross”.  One can explore this concept in greater detail in Murphy’s book <em>The Cosmos in the Light of the Cross</em>.  While there is a lot more to be said, let me conclude with the following observation:  though evolution may not be compatible with <em>some</em> interpretations of Christianity, <strong>evolutionary creation is certainly compatible with the crucified Christ and the theology of the cross</strong>.  In the person of Jesus, God suffers with the world and ultimately redeems it.  As George Murphy puts in, “The world's pains are God's stigmata.”<sup>18</sup></p>

<h3>Explore this Topic Further</h3>

<ul><li>Miller, Keith. <a href="http://biologos.org/blog/series/death-and-pain-in-the-created-order">“And God saw that it was good”: Death and Pain in the Created Order</a>. BioLogos series</li>

<li>Murphy, George L. <em>The Cosmos in the Light of the Cross</em>. Harrisburg, PA: Trinity Press, 2003.</li>

<li>Murphy, George L. “Cross, Evolution, and Theodicy: Telling It Like It Is”. In <em>The Evolution of Evil</em>. Edited by G. Bennett, M.J. Hewlett, T. Peters, and R.J. Russell. Göttingen: Vandenhoeck & Ruprecht, 2008.</li>

<li>Southgate, Christopher. <em>The Groaning of Creation: God, Evolution, and the Problem of Evil</em>. Louisville, KY: Westminister John Knox Press, 2008.</li></ul>

<h3>Notes</h3>
<p class="date">1.  Murphy, George L. <em>The Cosmos in the Light of the Cross</em>.  Harrisburg, PA: Trinity Press, 2003.<br />
2.  Murphy, p34<br />
3.  “CRUX Sola Est Nostra Theologia,” in <em>D. Martin Luthers Werke, Kritische Gesammtausgabe</em> (Weimar: Hermann Boehlau, 1892), 5:172.  The captitalization is in the original.  Cited in Murphy, p26.<br />
4.  Murphy, p108<br />
5.  Murphy, p4<br />
6.  Murphy, p43<br />
7.  Murphy, p3<br />
8.  Some Christians ascribe animal death to some combination of Adam’s fall and Noah’s flood, but this does not resolve the problem that the animals are still suffering and dying through no fault of their own.  See Keith Miller’s BioLogos series <a href="http://biologos.org/blog/series/death-and-pain-in-the-created-order">Death and Pain in the Created Order</a> for the limitations inherent in a fall-based theodicy.<br />
9.  Rudwick, Martin. <em>The meaning of fossils: Episodes in the history of paleontology</em>. Chicago, University of Chicago Press, 1985.<br />
10.  See Jeff Schloss’ BioLogos essay <a href="http://biologos.org/blog/series/southern-baptist-voices-evolution-and-death-series">Evolution, Creation, and the Sting of Death</a><br />
11.  Murphy, p63<br />
12.  Murphy, p122<br />
13.  Murphy, p27<br />
14.  This example is drawn from an evangelical outreach event held by a Christian student group in Innsbruck, Austria.  On campus one day, they started conversations with their classmates by asking the question, “Would you wear an electric chair on your neck?”<br />
15.  Murphy, George L.  <em>The Trademark of God: A Christian Course in Creation, Evolution, and Salvation</em>. Wilton, Conn.: Morehouse-Barlow, 1986.<br />
16.  Murphy, <em>Cosmos in the Light of the Cross</em>, p 31-32.<br />
17.  Murphy, p35<br />
18.  Murphy, p87</p>

]]></content:encoded>
        <pubDate>Tue, 04 Dec 12 04:00:47 -0800</pubDate>
        <dc:creator>Thomas Burnett</dc:creator>
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        <title>Series: Biblical and Scientific Shortcomings of Flood Geology</title>
        <link>http://biologos.org/blog/series/biblical&#45;and&#45;scientific&#45;shortcomings&#45;of&#45;flood&#45;geology?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/biblical&#45;and&#45;scientific&#45;shortcomings&#45;of&#45;flood&#45;geology?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Gregg Davidson and Ken Wolgemuth seek to remove the stumbling block of the Genesis flood in this four part series. Though many believe in an ancient world&#45;wide flood, the evidence given does not hold up to geological scrutiny, but points rather to something regional instead. It is their hope that Christians will not walk away from faith in Christ simply because a global flood is not supported by science. Looking at natural phenomena like the Grand Canyon, salt beds, and fossil deposits, they reveal reasons for these deposits and structures while showing that their origin did not stem from a violent flood that covered the planet.</description>
        <content:encoded><![CDATA[<p class="intro">This is the first in a four part series taken from Gregg Davidson and Ken Wolgemuth's <a href="http://biologos.org/uploads/projects/davidson_wolgemuth_scholarly_essay.pdf" target="_blank">scholarly essay</a> "Christian Geologists on Noah’s Flood: Biblical and Scientific Shortcomings of Flood Geology".</p>

<p>As Christians and geologists, we frequently encounter people with stories of storm tossed and shipwrecked faith that started when they began to wrestle with apparent conflicts between science and the Bible.  The stories have a common thread. The Bible, they were told, clearly teaches the earth was created a few thousand years ago with life forms fashioned more or less as we find them today. Because the earth is very young, the incredibly complex sequence of rock, sediment, and fossils found on our planet must have been deposited in a very short period of time. Noah’s Flood, as the only plausible causal agent, was obviously a global and violent event.  Theories of an ancient earth and adaptation of life forms, they were further informed, have been constructed on flimsy evidence created by atheistic scientists searching for ways to expunge God from modern culture. But as these sojourners began to explore and understand the actual evidence for an ancient earth, they found themselves increasingly convinced of its legitimacy, and thereby increasingly questioning the veracity of their faith – many to the point of relegating Christ to just another wishful myth.</p>

<p>It is our conviction that these stories of strained or lost faith derive not from an inherent unwillingness to trust the Bible, but rather from misguided teaching on the message of Scripture. Those insisting the earth is young are not simply putting their faith in God’s Word, they are putting their faith in their own particular interpretation of that Word. As such, an entirely unnecessary stumbling block to faith is created, where faith in Christ first requires rejection of sound science.</p>

<p>As we have prayed and studied this subject, we have felt God’s call to speak out against this misplaced stumbling block. We are sensitive, however, to the fact that when scientists speak on issues of faith, there is a natural suspicion that science will be regarded as the ultimate arbiter of truth, and Scripture will have to yield whenever conflict arises. It is thus important for us to state here that both of us ascribe to the authority and inspiration of Scripture, the reality and necessity of Christ’s death and resurrection, the existence of genuine miraculous events, and the truthfulness of the Biblical historical narratives. In our understanding, science will never trump Scripture, but by virtue of science being a study of God’s natural creation, it may occasionally assist in our understanding of God’s written Word. Where this has occurred historically and has been accepted by the Church, the invariable result has been the abandonment of an interpretation of some secondary importance, without any change in our understanding of the intended central message.</p>

<p>This phenomenon is illustrated well by the 17th century clash between Galileo’s claims that the earth revolves around the sun, and the multiple passages in Scripture that appear to clearly present a static earth as the physical center of God’s natural creation. The Bible tells us repeatedly that the earth is fixed upon its foundations (Ps 93:1, 104:5) and the sun rises and sets (Eccl 1:5, Ps 19:6).  Within the context of the historical narratives (which we are not accustomed to interpreting in any figurative manner) we read statements about “the sun rising over the land” (Gen 19:23), and a miraculous event during a famous battle where “the sun stopped in the middle of the sky and delayed going down a full day” (Josh 10:13). Likewise in the Levitical law, we find commands to complete the Passover sacrifice “when the sun goes down” (Deut 16:6).</p>

<p>God’s people had interpreted these verses for thousands of years to be authoritative statements about both spiritual and physical realms, and 17th century believers understandably struggled with allowing science to alter traditional interpretations. If God says the sun rises and the sun sets, how could it be otherwise?</p>

<p>Fast forward a few centuries, and we are now somehow quite content to have allowed science to alter our thinking on these verses, without abandoning notions of inerrancy or inspiration. The reason is simply because it was eventually recognized that the primary message of these verses was never on the nature of nature, but on the nature of man and his experience with his environment and his God. Solomon and Joshua accurately recorded their experience from an earthly perspective (sun rising and setting), and David praised God for holding the earth fixedly in His hand (Ps 93:1, 104:5), without requiring a meaning of fixity in space. The central message of these verses was apparent to readers before and after Galileo. Only a secondary interpretation, likely never intended by the writers, was cast off after scientific advances.</p>

<p>So what is the issue regarding Noah’s Flood? The modern debate centers around two questions. Was it truly global in extent, and can the Flood account for the earth’s complex geologic record?  To address the first, it is worth being reminded of the Apostle Paul’s letter to the church in Rome where he makes a statement that “your faith is being proclaimed throughout the whole world” (Rom 1:8). Entire people groups existed at this time in China, Australia, and North and South America who knew nothing of the church in Rome. Though using wording that literally means the entire world population, Paul is clearly referring to the world known to him and his readers at the time.<sup>1</sup>  Paul speaks truthfully from his experience. Allowing for the possibility that Noah’s Flood encompassed all of known humanity without necessarily covering the entire planet is thus consistent with how other passages in Scripture are interpreted by Christians who believe the Bible is authoritative and trustworthy.</p>

<p>Our primary interest in this blog series is the second question, the widely promulgated notion that the Flood can account for the earth’s complex geology, and that all genuine Christians should accept this viewpoint.</p>

<h3>Notes</h3>
<p class="date">1. Many Biblical scholars define a <em>literal</em> interpretation as one that takes into account the literary genre, figures of speech, context, and author/audience perspective in deriving the intended meaning. By this definition, poetry and allegory are <em>literally</em> interpreted as <em>figurative</em>. In this blog and in our article, our use of <em>literal</em> conforms to its more common definition where a literal interpretation is one that adheres to the precise definition of words without figurative meaning and without requiring additional context to understand.</p>]]></content:encoded>
        <pubDate>Mon, 17 Sep 12 05:41:28 -0700</pubDate>
        <dc:creator>Gregg Davidson, Wolgemuth, Ken</dc:creator>
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        <title>Hominids Lived Millions of Years Ago, but How Can We Tell? (Videocast)</title>
        <link>http://biologos.org/blog/hominids&#45;videocast?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/hominids&#45;videocast?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>This BioLogos videocast addresses the age of recently discovered hominid fossils and how scientists are able to obtain those dates.</description>
        <content:encoded><![CDATA[<p>Today we present the fifth entry in our on-going BioLogos videocast series. The latest episode addresses the age of recently discovered hominid fossils and how scientists are able to obtain those dates. The script was written by biology student Joy Walters, with help from BioLogos president Darrel Falk.</p>

<p>For more, be sure to read our FAQs <a href="http://biologos.org/questions/ages-of-the-earth-and-universe">How are the ages of the Earth and universe calculated?</a> and <a href="http://biologos.org/questions/what-scientific-evidence-do-we-have-about-the-first-humans">What scientific evidence do we have about the first humans?</a>, as well as our recent infographic <a href="http://biologos.org/blog/how-do-we-know-the-earth-is-old-infographic">How Do We Know the Earth is Old?</a>.</p>

<h3>Author's Note from Joy Walters</h3>
<p>As I mentioned in my first post, I grew up skeptical of the whole idea of evolution. One contributor to my disbelief was the lengthy timescale for the “tree of life” that was presented with the theory. I would hear, for example, that dinosaurs lived hundreds of millions of years ago, but there was no explanation of why this was true; it was just given as a fact. No one explained the methods of dating, and so I thought biologists simply estimated the ages of species to fit their preconceived notions of how long it would take for one species to emerge from another. It also seemed like the ages were periodically revised and extended farther back in time, and I figured scientists needed to manipulate numbers to make evolution plausible. This, in my mind, made the theory both unbelievable and dismissible.</p>

<p>Once I learned about the techniques used to date fossils, I realized that my first impressions were wrong; the ancient ages of species are scientific determinations rather than scholarly conjectures. However, I have found in recent conversations that Christians remain skeptical of old ages and the evolutionary time scale. For this reason, I wanted the videocast to address the process of fossil dating (what the methods are and why they are accurate) while focusing on cases where hominid fossils were discovered and dated using these very methods. My hope is that Believers would be informed about the evidence for human evolution and its scientific grounding.</p>]]></content:encoded>
        <pubDate>Thu, 26 Jul 12 05:00:03 -0700</pubDate>
        <dc:creator>Joy Walters</dc:creator>
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        <title>The Fossil Record</title>
        <link>http://biologos.org/blog/the&#45;fossil&#45;record?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/the&#45;fossil&#45;record?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>There are two opposite errors which need to be countered about the fossil record: 1) that it is so incomplete as to be of no value in interpreting patterns and trends in the history of life, and 2) that it is so good that we should expect a relatively complete record of the details of evolutionary transitions within all or most lineages.</description>
        <content:encoded><![CDATA[<h3>The Fossil Record:  Is there enough evidence ?</h3>

<p>There are two opposite errors which need to be countered about the fossil record: 1) that it is so incomplete as to be of no value in interpreting patterns and trends in the history of life, and 2) that it is so good that we should expect a relatively complete record of the details of evolutionary transitions within all or most lineages.</p>

<p>What then is the quality of the fossil record?  It can be confidently stated that only a very small fraction of the species that once lived on Earth have been preserved in the rock record and subsequently discovered and described by <a onmouseover="toggle_visibility('pop1');" onmouseout="toggle_visibility('pop1');">science</a>.</p>

<div class="see-also" id="pop1" style="display:none;">A more expanded discussion of this topic can be found in Miller, K.B., 2003, “Common descent, transitional forms, and the fossil record,” IN, K.B. Miller (ed.), <em>Perspectives on an Evolving Crreation</em>, Wm. B. Eerdmans, Grand Rapids.</div>

<p>There is an entire field of scientific research referred to as "taphonomy" -- literally, "the study of death."   Taphonomic research includes investigating those processes active from the time of death of an organism until its final burial by sediment.  These processes include decomposition, scavenging, mechanical destruction, transportation, and chemical dissolution and alteration.  The ways in which the remains of organisms are subsequently mechanically and chemically altered after burial are also examined -- including the various processes of fossilization.  Burial and "fossilization" of an organism's remains in no way guarantees its ultimate preservation as a fossil.  Processes such as dissolution and recrystallization can remove all record of fossils from the rock.  What we collect as fossils are thus the "lucky" organisms that have avoided the wide spectrum of destructive pre- and post-depositional processes arrayed against them.</p>

<p>Soft-bodied organisms, and organisms with non-mineralized skeletons have very little chance of preservation under most environmental conditions.   Until the Cambrian nearly all organisms were soft-bodied, and even today the majority of species in marine communities are soft-bodied.  The discovery of new soft-bodied fossil localities is always met with great enthusiasm.  These localities typically turn up new species with unusual morphologies, and new higher taxa can be erected on the basis of a few specimens!  Such localities are also erratically and widely spaced geographically and in geologic time.</p>

<p>Even those organisms with preservable hard parts are unlikely to be preserved under "normal" conditions.  Studies of the fate of clam shells in shallow coastal waters reveal that shells are rapidly destroyed by scavenging, boring, chemical dissolution and breakage.  Occasional burial during major storm events is one process that favors the incorporation of shells into the sedimentary record, and their ultimate preservation as fossils.  Getting terrestrial vertebrate material into the fossil record is even more difficult.  The terrestrial environment is a very destructive one: with decomposition and scavenging together with physical and chemical destruction by weathering.</p>

<p>The potential for fossil preservation varies dramatically from environment to environment.  Preservation is enhanced under conditions that limit destructive physical and biological processes.  Thus marine and fresh water environments with low oxygen levels, high salinities, or relatively high rates of sediment deposition favor preservation.  Similarly, in some environments biochemical conditions can favor the early mineralization of skeletons and even soft tissues by a variety of compounds (eg. carbonate, silica, pyrite, and phosphate).  The likelihood of preservation is thus highly variable.  As a result, the fossil record is biased toward sampling the biota of certain types of environments, and against sampling the biota of others.</p>

<p>In addition to these preservational biases, the erosion, deformation and metamorphism of originally fossiliferous sedimentary rock have eliminated significant portions of the fossil record over geologic time.  Furthermore, much of the fossil-bearing sedimentary record is hidden in the subsurface, or located in poorly accessible or little studied geographic areas.  For these reasons, of those once-living species actually preserved in the fossil record, only a small portion have been discovered and described by science.  However, there is also the promise of continued new and important discovery.</p>

<p>The forces arrayed against fossil preservation also guarantee that the earliest fossils known for a given animal group will always date to some time after that group first evolved.  The fossil record always provides only minimum ages for the first appearance of organisms.</p>

<p>Because of the biases of the fossil record, the most abundant and geographically widespread species of hardpart-bearing organisms would tend to be best represented.  Also, short-lived species that belonged to rapidly evolving lines of descent are less likely to be preserved than long-lived stable species.  Because evolutionary change is probably most rapid within small isolated populations, a detailed species-by-species record of such evolutionary transitions is unlikely to be preserved.  Furthermore, capturing such evolutionary events in the fossil record requires the fortuitous sampling of the particular geographic locality where the changes occurred.</p>    

<p>Using the model of a branching tree of life, the expectation is for the preservation of isolated branches on an originally very bushy evolutionary tree.  A few of these branches (lines of descent) would be fairly complete, while most are reconstructed with only very fragmentary evidence.  As a result, the large-scale patterns of evolutionary history can generally be better discerned than the population-by-population or species-by-species transitions.  Evolutionary trends over longer periods of time and across greater anatomical transitions can be followed by reconstructing the sequences in which anatomical features were acquired within an evolving branch of the tree of life.</p>]]></content:encoded>
        <pubDate>Fri, 13 Jul 12 05:00:15 -0700</pubDate>
        <dc:creator>Keith Miller</dc:creator>
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        <title>What scientific evidence do we have about the first humans?</title>
        <link>http://biologos.org/questions/what&#45;scientific&#45;evidence&#45;do&#45;we&#45;have&#45;about&#45;the&#45;first&#45;humans?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/questions/what&#45;scientific&#45;evidence&#45;do&#45;we&#45;have&#45;about&#45;the&#45;first&#45;humans?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In recent decades, scientists have discovered more about the beginnings of humanity.  The fossil record shows a gradual transition over 5 million years ago from chimpanzee&#45;size creatures to hominids with larger brains who walked on two legs.   Later hominids used fire and stone tools and had brains as large as modern humans.  Fossils of homo sapiens in east Africa date back nearly 200,000 years.  Humans developed hearths for fire, stone points for spears and arrows, and cave paintings by 30,000 years ago.   By 10,000 years ago, humans had spread throughout the globe.   Genetic studies support the same picture.  Humans share more DNA with chimpanzees than with any other animal, suggesting that humans and chimps share a relatively recent common ancestor.  Also, the same defective genes appear in both humans and chimps, at the same locations in the genome—an observation difficult to explain except by common ancestry. Genetics also tells us that the human population today descended from more than two people. Evolution happens not to individuals but to populations, and the amount of genetic diversity in the gene pool today suggests that the human population was never smaller than several thousand individuals.  Yet all humans, of all races, are descended from this group.  Humanity is one family.</description>
        <content:encoded><![CDATA[<em>Coming Soon</em>]]></content:encoded>
        <pubDate>Thu, 12 Jul 12 14:34:24 -0700</pubDate>
        <dc:creator></dc:creator>
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        <title>Beginning with the End in Mind</title>
        <link>http://biologos.org/blog/evolutionary&#45;convergence?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/evolutionary&#45;convergence?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In today&apos;s video, Oxford physicist Ard Louis discusses the famous debate between renowned evolutionary biologists Stephen Jay Gould and Simon Conway Morris over the idea of evolutionary convergence.</description>
        <content:encoded><![CDATA[<p align="center"><iframe src="http://player.vimeo.com/video/33680427?title=0&amp;byline=0&amp;portrait=0" width="571" height="321" frameborder="0" webkitAllowFullScreen mozallowfullscreen allowFullScreen></iframe></p>

<p class="intro">Today's video is courtesy of filmmaker Ryan Pettey, director/editor of Satellite Pictures and features physicist Ard Louis.</p>

<p>In today's video, Oxford physicist Ard Louis discusses the famous debate between renowned evolutionary biologists Stephen Jay Gould and Simon Conway Morris. Gould believed (and wrote in his book <em>Wonderful Life</em>) that if the "tape" of evolution were rerun, the chance that anything like human intelligence would emerge is essentially zero. In other words, humanity is here through random accident. Gould pointed to the work of Morris and fellow scientists in their research of the Burgess Shale as evidence for this view.</p>

<p>However, Morris himself disagrees, pointing to what is called evolutionary convergence. As Morris notes, there are numerous examples of identical features evolving multiple times throughout the history of life independently. Morris believes that if the tape of life were replayed, we would see something like humans emerge. A Christian might say, it looks like we were planned.</p>


<p>Some Christians might find Simon Conway Morris' viewpoint, with its implicit teleology, more attractive. Others, perhaps motivated by a high view of providence, may find Gould's emphasis on contingency equally congenial to their faith.  What do you think?</p>]]></content:encoded>
        <pubDate>Thu, 15 Dec 11 05:51:27 -0800</pubDate>
        <dc:creator>Ard Louis</dc:creator>
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        <title>Evidences for Evolution, Part 2b: The Whales’ Tale</title>
        <link>http://biologos.org/blog/evidences&#45;for&#45;evolution&#45;part&#45;2b&#45;the&#45;whales&#45;tale?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/evidences&#45;for&#45;evolution&#45;part&#45;2b&#45;the&#45;whales&#45;tale?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>If evolution is true, whales are related to the even&#45;toed hoofed mammals, and there should be transitional fossil forms dating from about 45 to 50 million years ago.</description>
        <content:encoded><![CDATA[<p class="intro">This blog (first posted on June 28, 2010) is the third piece in a series by Darrel Falk and David Kerk.  The previous entry is found <a href="http://biologos.org/blog/evidences-for-evolution-part-2a-the-whales-tale/">here</a>.</p><p>In our previous <a href="http://biologos.org/blog/evidences-for-evolution-part-2a-the-whales-tale/">essay</a>, we learned that a tree summarizing species relationships can be built using DNA information, and how we can use DNA as a “molecular clock” to date ancient events.  Both of these methods have made specific predictions about the origin of whales.  If evolution is true: whales are related to the <a href="http://en.wikipedia.org/wiki/Even-toed_ungulate" target="_blank">even-toed hoofed mammals</a> and should share common ancestors with them; transitional fossil forms dating from about 45 to 50 million years ago should be found which can be shown to be related to both the even-toed hoofed mammals and modern whales; whales are most closely related to modern hippos, and should share a common ancestor with them.</p>

<p>What other types of information might we be able to use to construct a phylogenetic tree (i.e. a family tree) of species relationships?  It turns out that characteristics of body structure also can be used – for example, the presence or absence of certain bones, or the specific shapes of those bones.  An advantage of using bony features is that they can be recovered from fossils, whereas DNA (with only certain limited exceptions) must come from living organisms.</p>  

<p>We can also derive functional information from an examination of bony features.  The various protrusions, bumps and knobs found on bones usually have important implications.  For example, smooth rounded areas at the ends of bones allow them to fit together and move easily.  The shapes of such surfaces determine which bone motions are “allowed” or “disallowed”.  Consider, for example, the motion of the forearm against the upper arm at the elbow.  This is a “hinge” joint, whose normal motion is defined by the shapes of the upper arm bone and one of the forearm bones, where they meet each other.  You might normally exercise the action of this hinge joint when you pick up a cup of coffee, bring it to your mouth, then set it back down again. Let’s try to imagine another motion.  For this exercise we first need to get our arm into the proper starting position.  Place your arm at your side, bent at the elbow at a ninety degree angle, with your palm up.  Now, while keeping your palm up, let’s attempt to move your arm only at the elbow (no shoulder motion – that’s cheating!).  Now swing your forearm out to the side and attempt to end up with your fingers pointed directly away from your side.  Most of you will not be able to do this.  If you can, it’s because your shoulder is rotating in spite of yourself.  This motion at the elbow is normally not allowed. Hence a careful analysis of bone shapes can allow us to infer how the bones were used.  This in turn can assist us in the task of phylogenetic (evolutionary) classification of organisms.  That is, we will have more confidence in the grouping together of animals in our tree diagram if corresponding bones are used functionally in the same way.</p>

<p>Therefore we would expect that we could use various bony features to help us examine the predictions generated by our previous look at different types of DNA data.  Are there any bony features that are particularly relevant to the even-toed hoofed mammals?  Well, it turns out that there are.  These are mainly running animals, and there are several features of their ankle bones, which taken together define the “allowed” motions which make them efficient runners.  If one takes the various ankle bones of a large group of mammals, examines them carefully to note their shapes, scores that information into a table, then uses a computer program to build a phylogenetic tree, it turns out that all the even-toed hoofed mammals are placed together. So far, so good.  But what about whales?  Well, now we have an obvious problem.  Modern whales are very specialized, - they have flippers which correspond to the forelimbs, and they have almost no hind limbs!  I say “almost” because they do have small pelvic bones, which are not attached to the rest of their skeletons.  But they certainly have no ankles.  This is where the fossils should come in – if evolution is true, we should expect to be able to identify transitional fossils which are ancestral to whales which contain the characteristic ankle bony features of the even-toed hoofed mammals.</p>

<p>Now let’s look at bony features from the whale perspective.  We have already mentioned the almost complete loss of hind limbs, and the presence of forelimbs modified into flippers.  In addition, as air breathers, whales have a blowhole at the top of their skull.  And as powerful swimmers, which use a large tail fluke in vertical motions, whales have enormous sets of muscles which attach to enlarged projections from their vertebral column.  So if evolution is true, we should begin to see fossil forms which manifest changes in bony features which correspond to the gradual accumulation of these whale-like characteristics.  However, we still need more, because these various bony features all would be expected to occur in largely or exclusively aquatic forms.  We might expect this to correspond to the later stages of a transition from terrestrial even-toed hoofed mammals.  But what about the earlier stages?  It would be very helpful if we had some “defining” characteristic of whales, similar to the ankle structure of even-toed hoofed mammals.</p>

<p>It turns out that the structure of the bones of the skull and ear apparatus of whales are highly modified to allow efficient hearing underwater.  The mechanical aspects of efficiently receiving sound through water are somewhat different than receiving sound travelling through air.  If evolution is true, we should expect to be able to find key transitional fossil forms with a progressive series of modifications of the skull and ear bones, features which would not be found in any other mammals.</p>  

<p>Now that we know what we should expect to see, if evolution is true, let’s look at what has actually been found in the fossil record.  Over the last fifteen years or so, a series of fossils, many of them discovered in the Indian subcontinent, have fulfilled nearly all of our predictions.<sup>1,2</sup> Let’s look at the figure below (Figure 1), reproduced from a recent popular book on evolution.<sup>3</sup>  This shows a series of fossils, arranged in approximate chronological order, with a modern whale at the top.  How old are these fossil forms?  The entire fossil progression illustrated occurs from a little over 50 million years ago to about 40 million years ago.  So a remarkable alteration in general body form occurred in a little over 10 million years.  This time frame agrees well with the previous prediction from the DNA “clock” that we discussed in our previous <a href="http://biologos.org/blog/evidences-for-evolution-part-2a-the-whales-tale/">essay</a>.  Second, the general change in body shape corresponds to what we predicted in our discussion of whale bony features above.  That is, there is a gradual elongation and streamlining, there is a modification of the forelimb into flippers and progressive reduction of the hindlimb, the nostrils for breathing move toward the top of the skull to form a blowhole (not obvious from the diagram), and the vertebrae develop enlarged projections to support the attachment of swimming muscles.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/Figure_1.png"></p>
 
<p align="center"><strong>Figure 1: Skeletons and Body Forms of Modern Whales and Fossil Ancestors</strong><br />

The reconstructed skeletons (black) from modern whales (top) and various ancestral skeletal forms (series below) are in chronological order (from <em>Pakicetus</em> up).  <em>Indohyus</em> is an extinct whale “cousin”.  Relative body size, to scale, is indicated by the gray shapes at the right of each animal.</p>	

<p>There is probably little question that the last fossil species in the figure (<em>Durodon</em>) is well on the way to becoming a modern whale.  However, it might be argued by a skeptic that the earlier species (like <em>Rhodocetus</em>, <em>Ambulocetus</em>, or <em>Pakicetus</em>), despite the “cetus” (whale) part of their names, are not so obviously “whale-like” that they deserve to be considered as fossil whale ancestors.  However, remember the characteristic whale skull modifications for hearing?  It has been shown very clearly that throughout this series of fossil species, the various bony changes necessary to support efficient hearing in water were being acquired in a stepwise fashion.  Organisms earlier in the sequence had skeletal characteristics consistent with them being able to hear well in both air (using the “classic” mammalian hearing apparatus), and newly acquired changes to also allow better hearing in water.  Later organisms in the sequence become increasingly specialized for hearing in water only.<sup>4</sup></p>
  
<p>What of the earliest fossil shown in this diagram –<em>Pakicetus</em>?  Careful examination shows that it has the features we would predict for an early whale ancestor.  It has the ankle bone characteristics of the even-toed hoofed mammals (in fact these features are also found in several of the later fossil forms as well, ensuring their continuity).  This confirms one of the predictions made by the DNA evidence we discussed earlier.  Furthermore, it has some of the modifications of the skull bones necessary for more efficient underwater hearing, which were previously documented only for modern whales and their later (more obvious) ancestors.<sup>4</sup>  These features are also shared with the “whale cousin” <em>Indohyus</em>.<sup>5</sup>  Preservation of more of the skeleton of this latter species has allowed detailed analysis indicating characteristics likely shared with whale ancestors.  <em>Indohyus</em> was probably a wading animal, which spent much of its time in the water.  It appears to have fed mostly on land, so it is suggested that resort to the water was made to escape predators.<sup>5</sup></p>

<p>Finally, we need to look back at the last prediction from our previous DNA evidence, namely that modern whales are most closely related to hippos.  If evolution is true, we should expect to find fossil forms linking these two modern groups.  This has proven to be a tougher nut to crack, mainly because the ancestral whales first appear about 50 million years ago in what is now south Asia, and the hippo family first appears about 15 million years ago, in Africa.  The most recent tree diagram, produced by using a combination of skeletal features and DNA data, still supports this family connection, as shown by the following figure (Figure 2).<sup>6</sup></p>  

<p align="center"><img src="http://biologos.org/uploads/static-content/Figure_2.png"></p>
<p align="center"><strong>Figure 2: Phylogenetic Tree Showing the Relationship of Modern Whales to Living and Extinct Even-Toed Hoofed Mammals</strong><br />
This tree is based on both bony features and DNA data.  The organisms presented in blue are semi-aquatic or aquatic forms.  Organisms shown in green are terrestrial even-toed hoofed mammals (Artiodactyls).  In black is shown a member of the odd-toed hoofed mammals.  In red is an extinct fossil ancestor group. (This figure is adapted from Fig 1a in Reference 6).</p>

<p>The blue lines in the diagram show species in which the skeleton is specially thickened, and the bone structure more dense.  This is an adaptation which allows wading animals (like modern hippos and the fossil <em>Indohyus</em>)  to be good “bottom-walkers” (it prevents them from floating due to lighter body tissues), and allows fully marine organisms (like modern whales) to have “neutral buoyancy” (so they don’t always tend to pop up to the water surface, like a cork).  There has also been progress in clarifying the relationships between fossil ancestors of hippos and those of modern whales.   A recent study of hippo evolution, based only on skeletal characteristics, has conclusively shown that the hippo family are descended from an extinct group of fossil Artiodactyls, known to go back more than 40 million years, and whose fossils are from southern Asia.  Furthermore, this study produced a phylogenetic tree predicting that this extinct hippo ancestor group also shared a common ancestor with the fossil whales.<sup>7</sup>  Thus the investigation of hippo origins is independently leading us back toward the origin of whales.  However, in this study the statistical support for predicted common ancestor of the ancient hippo group and the ancient whale group is not as strong as scientists would like to consider this “case closed”.  What is necessary is more fossils, of the appropriate age in order to complete the story of hippo evolution.   We still need that to fill in the details of the predicted relationship of hippos to modern whales.</p>

<p>Thus the “Whales’ Tale” is not yet complete.  It is a story of scientific discovery in progress.  As we finish, let’s briefly summarize what we have found out.  Different types of DNA evidence agree that modern whales are most closely related to the even-toed hoofed mammals, despite the obvious great changes in limb anatomy of the modern whales.  This prediction has been amply confirmed by the fossil record.  The DNA sequence evidence predicted a time frame during which critical early events in evolution of whale ancestors should occur.  This prediction has also been amply confirmed.  Finally, DNA evidence predicts that modern whales are most closely related to hippos.  There is some fossil evidence supporting a predicted common ancestor, but more data is needed.  A final caution to possible sceptics – this state of “unfinished business” is precisely how the scientific process works.  There is no “crisis”.  There is no indication that evolution is not true.  There is simply the ongoing work of mapping out of various lines of evidence.  A scientific conclusion is considered well supported if “all roads lead to Rome”.  In the case of whale evolution it might be prudent to say that the evidence has not quite converged in Rome yet, but that we are now in the suburbs.   That is precisely what makes science interesting and fun.  Stay tuned!</p>

<p class="intro">The next blog in this series can be found <a href="http://biologos.org/blog/evidences-for-evolution-part-3a/">here</a>.</p>

<h3>References:</h3>

<p>1: Thewissen J.G.M., Williams E.M., Roe L.J. and Hussain S.T. 2001. Skeletons of terrestrial cetaceans and the relationship of whales to artiodactyls. <em>Nature</em>. 413: 277-281.</p>
<p>2: Gingerich P.D., ul Haq M., Zalmout I.S., Khan I.H., Malkani M.S. 2001. Origin of Whales from Early Artiodactyls: Hands and Feet of Eocene Protocetidae from Pakistan. <em>Science</em>. 293:2239-2242.</p>
<p>3: Coyne, J.A. 2009.  <em>Why Evolution is True</em>. Viking Penguin, New York.  Pg 50.</p>
<p>4: Numella S., Thewissen J.G.M., Bajpai S.,Hussain T., Kumar K. 2007. Sound Transmission in Archaic and Modern Whales: Anatomical Adaptations for Underwater Hearing. <em>The Anatomical Record</em>. 290:716-733.</p>
<p>5: Thewissen J.G.M., Cooper L.N., Clementz M.T., Bajpai S., Tiwari B.N. 2007. Whales originated from aquatic artiodactyls in the Eocene epoch of India. <em>Nature</em>. 450:1190-1194.</p>
<p>6: Geisler J.H. and Theodor J.M. 2009. Hippopotamus and whale phylogeny. <em>Nature</em>. 458:E1-E4.</p>
<p>7: Boisserie J.-R., Lihoreau F., Brunet M. 2005. The position of Hippopotamidae within Cetartiodactyla. <em>Proceedings of the National Academy of Sciences U.S.A.</em> 102(5):1537-1541.</p>
]]></content:encoded>
        <pubDate>Sun, 27 Nov 11 23:31:20 -0800</pubDate>
        <dc:creator>David Kerk</dc:creator>
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        <title>Seeing the Flood Story Through an Ancient Israelite Lens</title>
        <link>http://biologos.org/blog/saturday&#45;sermon&#45;the&#45;flood?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/saturday&#45;sermon&#45;the&#45;flood?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Pete Shaw highlights the story of Noah to explore how the story would have been understood in ancient times and from there he goes on to explore how we might consider it today.</description>
        <content:encoded><![CDATA[<p class="intro">Though some may believe that moving the science/faith dialogue forward is best left to scientists, scholars, and theologians, we at BioLogos recognize that our pastors play an invaluable role in the conversation. Across the globe, pastors are helping their congregations work through difficult issues of science and faith with honesty, insight, and a gentle spirit. To this end we present an ongoing series recognizing sermons (and the pastors who give them) that are helping to promote the harmony of science and faith. Today's sermon features Pete Shaw, who is the senior pastor of <a href="http://www.crosswalknapa.org/" target="_blank">Crosswalk Community Church</a> in Napa California. The full sermon can be downloaded <a href="http://www.crosswalknapa.org/sermon/110515-the-flood/" target="_blank">here</a>. <strong>Finally, if you know a sermon or podcast related to science and faith that has especially spoken to you, please <a href="/contact">let us know</a></strong>.

<p align="center"><iframe src="http://player.vimeo.com/video/31992768?title=0&amp;byline=0&amp;portrait=0" width="571" height="321" frameborder="0" webkitAllowFullScreen allowFullScreen></iframe></p>

<p>The early chapters of Genesis appear to pose scientific problems that challenge our literal, post-Enlightenment lens through which we often read the Word of God. (See this  <a href="http://biologos.org/blog/saturday-sermon-science-the-enlightenment-and-god" target="_blank">post</a> for a commentary on how this situation came about.) This leads many people to believe that the descriptions in these texts are meant to reveal more than raw scientific fact. Pete Shaw of Crosswalk Community Church highlights the story of Noah and the Ark to explore the possible reasons for adopting a non-literal understanding of this ancient narrative. Shaw first summarizes the story of Upnashatim in the Epic of Gilgamesh, a famous Sumerian flood story that the young and old in Abraham’s day would have known well. Upon comparison, these two accounts—the Genesis flood and the Gilgamesh flood—are incredibly similar. Furthermore, Shaw exposes the various practical problems that arise if one takes every word of the Noah story to be a precise truth. For example, he wonders how Noah could have fed and maintained every living land creature in a small boat for ten months. He also explains how a primitive understanding of the universe is heavily reflected in this text. In light of these points, he concludes that whether or not this story is portraying actual historical events, it is presenting rich truths about God, and that should be the focus of the believer.</p>

<h3>Transcript</h3>
<p>“The first eleven chapters of Genesis are what scholars call pre-history. In other words, they can’t really date what was going on very well in those first elven chapters. After that, twelfth chapter on, it is a lot easier to date, and the stories have a different feel, a different structure… but those first eleven have caused a lot of debate over the years. In fact, the next slide is going to kind of give you the line of where I am going to take you today. You might not be aware of this, but there is a Noah controversy. You and I, when we hear the story of a great flood, the first thing that comes to our mind—when we think of the whopper of all whoppers—we think of Noah and the Ark, but if we lived in Abraham’s time or especially before, the name Noah probably would not have come up. In fact, if we grew up with Abraham, the story we would have most likely known about was the story—I am going to butcher this name—of Utnapishtim.</p>

<p>You are familiar with Utnapishtim aren’t you? And you are familiar with the god Enlil. I am sure you are familiar with Enlil. And you would have been very aware of a storybook that was read by children and adults alike called the Epic of Gilgamesh. And in the eleventh tablet of the Epic of Gilgamesh, we have the story of Utnapishtim and the god Enlil. And just so that you would know about that story a little bit, knowing that that would have been the predominant story that you would have understood anytime you thought about a flood, this is how the story went down. So, this god Enlil was the god of thunder and rain and all that and he was not a happy camper (kind of temperamental) as thunder gods can be. And for no clear reason, except to mess around with some of the other gods in his discontent, he made the decision that he was going to wipe out the earth with a great flood. And one of the other gods, a goddess in fact, did not like that this was going to happen and thought that it was unfair, unjust, and so she sent a message to Utnapishtim that this flood was going to come at the hand and the wrath of Enlil. And so Utnapishtim got to work, and he built a vessel (a strange vessel), a cube, but he used some of the similar materials that we saw in the Ark, and he made this massive structure (if in fact you do the math, it is probably at least twice, if not much larger, than the actual Ark) this massive cube that he made hoping that it would float, and he got it done on time.</p>

<p>The rain didn’t come down for forty days, it came down just for seven, but it flooded everything out, and the only survivor was Utnapishtim. And when Enlil came around and saw that some human beings had survived, he was very upset because he intended to wipe out everybody to show his wrath and his anger to the world and to show that he was upset to all the gods in heaven. Well, Utnapishtim obviously saved his own life, the life of his family, the life of his personal animals because those are the animals that he saved—not the rest of the animals of the world. And he took some carpenters along because he didn’t know how to build stuff and once you are starting over you have got to build stuff, and so he brought some carpenters along. In honor of his faithfulness (in light of this word from the goddess) he was given divinity. And so, he became a god, he became one of the gods, he got to reside in heaven, if you will, because of his faithfulness…interesting story.</p>

<p>If you grew up in Sumer, which is present day Iraq, and you grew up with Abraham in what is present day Baghdad that would have been the story that you would have known very, very well. It is because that story exists and other cultures have their own flood stories as well that some scholars look at the story of Noah and the Ark, and they think, ‘well, gee, how should we really interpret this thing? You know, our Enlightenment and post-Enlightenment perspective says it is in black and white, and if it says that is what happened, then that is exactly what happened. There is no way around it.’ Well, what if the first people who shared this story with each other and what if the early writers of this word, what if when they approached the Bible, they didn’t approach it the way we do? What if they didn’t approach the Bible, the Word of God, as a literal, this is exactly how it happened book that our post- Enlightenment eyes are framed to do? How would that change us? And also, some of the things that some of the challengers of this story are bringing out are some of the issues with the story like ok is this really a big enough boat to handle all of the creatures of creation…can they really, really fit?</p>

<p>Some have really tried to make a case that there weren’t as many animals back then as there are now because they got together and hooked up, and now, we have all kinds of varieties and that kind of thing. And so that is kind of there, but you are talking ten months of time! How do you feed all the animals of the world? How do you store all the food? Did they eat fish, because the fish didn’t die? The fish lived on just fine. How do you do that? And what about—it is kind of unpleasant—but all the excrement? What are you going to do with all that ‘bleep?’ Are you going to throw it out the eighteen inch window at the top? Did they have a conveyor belt system? How did it work? And so they look at that and think, ‘I am just not sure about that.’ Would you really take that literally? Is that how we should take it? Is that how they took it around their campfires and around their dinner tables? Did they think about it that way?</p>

<p>And there are other issues too that academics look at, and they challenge somewhat.   Like they know that forty days and forty nights is a proverbial statement in Jewish culture. It was like saying (and you see it in many accounts in the Bible), forty days and forty nights was saying a long time, but it probably was not meant to be taken literally. It is just a long time. It is how they thought about things. Then, there is the issue of the rain itself, and how it all came down. Now, the New Living Translation and most modern translations, just simply talk about it as--there is the sky and the rain came down from the sky and you are good to go. But there is another word that is used.  If you go to the New King James Bible, for instance, and they talk about the firmament—that the rain came down from the firmament. And so, when we think about firmament, we think, ‘well they are talking about sky or they are talking about the starry host and all that stuff,’ but if we go back to the original word, which the New American Standard version got right (it is one of the most academic and precise versions that is out there), both in the creation story and in the Noah account, they use a different word for sky: they use the word dome.</p>

<p>Now, I am going to butcher this a little bit, but broad stroke version is that the way the ancient people saw the world was that we kind of lived in this bubble, you know sort of like a snow globe, and there was water--not all inside, but outside, surrounding us. There was water below and there was water above, and above us was this massive dome called the firmament or called the sky. And then when it rained it was because God was opening up the floodgates of heaven. That is how they thought back then. They didn’t know any better. And so, kind of what these questions are asking us now is how we make sense of this and do we have to believe like they did in order to believe the story. How many of you believe that the sun revolves around the earth? None! Nobody does. Do you get mad at, do any of you hold a grudge against the earliest people in the Bible, actually, all the people in the Bible, do you hold them accountable and are you angry at them that they believed with everything in them that the sun revolved around the earth and not the other way around?... no, of course not. Do you get angry at them because they believed we lived in a dome and that God opened up the gates of heaven and there you go? No, you don’t hold it against them because you understand that it is the best that they could do given their time.</p>

<p>But we live in the age of Doppler radar, right? We know within minutes, you know, when rain is going to hit Napa and when it is going to move on to Valeo, and so on and so forth. I mean it is that precise, and we know when it is coming hundreds of miles off shore and we can look thousands of miles because of satellite stuff and our ability to understand temperatures and all that. We know how the whole thing is brewing. We know that hurricanes are lining up one after the other  in hurricane season because we have cameras up there that are seeing them start to form, and we can gauge temperature in the water and so forth—we do not live back then. So, it would be inappropriate for us to become primitive in the sense of looking at the world the same way they did in that kind of a literalness because we know different, you know what I mean? We know different. And so really the bottom line is that the literalness of the story really isn’t the most important thing to begin with anyway.”</p>

<p class="intro"> A few editorial reflective thoughts by Darrel Falk: The sermon continues, of course, and you can download it at the above link.  What<em> is</em> "the most important thing" to which Pastor Shaw refers as the audio clip draws to a close? Regardless of whether you think it is historical or not, what is the message that God wants to communicate to us through this story?  Consider reading Genesis 9 right now.  What are the parallels in this "recreation"account to the original creation account?  What does God want us to see in making those parallels?  What about the rainbow? What does it symbolize for you?  Can you sense God's love for all of creation (not just humankind) as this story draws to a close?  Why does the story of Noah himself, however, not have a happier ending?  Have we seen the theme of nakedness and the need to cover up nakedness in an earlier scriptural passage?   Why do you think the story of Noah draws us back to this point (nakedness and shame), just like the story Adam and Eve does?  What brought on shame for them?  What brings on shame for us?  Do you see that God is wanting us to think deeply about this story and its meaning?   What is another example of the need to cover up? (Hint: think Moses.)  What difference does the coming of Jesus make to all of this? (Hint: see II Corinthians 3:12-18.) Do you see the rainbow?]]></content:encoded>
        <pubDate>Sat, 12 Nov 11 04:00:15 -0800</pubDate>
        <dc:creator>Pete Shaw</dc:creator>
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        <title>New Limbs from Old Fins, Part 2: Comparative Anatomy</title>
        <link>http://biologos.org/blog/new&#45;limbs&#45;from&#45;old&#45;fins&#45;part&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/new&#45;limbs&#45;from&#45;old&#45;fins&#45;part&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Critics of evolution sometimes portray the theory as an untestable historical conjecture, depicting it as fundamentally different from experimental science in the lab. But the hunt for the earliest tetrapods was an effort to test a hypothesis that had generated a prediction.</description>
        <content:encoded><![CDATA[<p>In the <a href="http://biologos.org/blog/new-limbs-from-old-fins">previous post</a> in this series, we looked at the remarkable blueprint that underlies all limbs – one bone, two bones, blobs, digits – and considered some ways we might explain it. One potential explanation is, roughly speaking, design. Perhaps the blueprint represents an idea or preference in the mind of the Creator. Perhaps the blueprint represents an optimized design, one so superior that there is no better way to build a limb. The other potential explanation is common ancestry. The blueprint was present in ancestors of the distant past, and it has been retained with modification in all tetrapod vertebrates that have descended from those pioneering ancestors. We noted that one explanation need not entirely preclude the other.</p>

<p>In the rest of the series, we will look closely at the evolutionary explanation for the blueprint. That explanation postulates that <a href="http://www.ucmp.berkeley.edu/vertebrates/tetrapods/tetraintro.html" target="_blank">tetrapod</a> limbs arose during a particular era in life's history, and that they arose as modifications of the fins of fish. And the evolutionary explanation isn't just an interesting idea. It's a comprehensive explanation – it helps us to understand bones, fossils, genes, chemical signaling systems. It provides a coherent framework for understanding why limbs are the way they are, and how they got that way.</p>

<h3>Comparing the anatomy of tetrapod vertebrates and fish</h3>

<p>The idea that tetrapods arose from fish is not new; <a href="http://books.google.com/books?id=jVIsAAAAYAAJ&" target="_blank">E.D. Cope proposed</a> in 1892 that tetrapods descended from lobe-finned fish. (Modern lobe-finned fishes include coelacanths and lungfish, and comprise one of two divisions of the bony fishes. The other division, the ray-finned fishes, includes most familiar kinds of fish.) In the early days, biologists inferred ancestral relationships between species largely through comparative anatomy and embryology: they would carefully classify organisms according to their structure (including their structure during development) and look for relationships that generated nested hierarchies. A simple nested hierarchy goes something like this: 1) animals with backbones; 2) animals with backbones and limbs; and 3) animals with backbones, limbs, and hair. Animals in group 3 also belong to groups 1 and 2, while animals in group 2 also belong to group 1, and so the groups together define a nested hierarchy. Such studies alone could have led some scientists to infer an ancestral relationship between fish and tetrapods, and perhaps those studies did convince them. But then there were fossils of various types of fish and other vertebrates, many long extinct. That fossil record was relatively sketchy in 1892, but it nevertheless led Cope and others to conclude that certain fish had given rise to tetrapods at a particular time in natural history.</p>

<h3>The fossil record shows a fish-to-tetrapod transition</h3>

<p>Here are some basic findings from the fossil record that suggest a fish-to-tetrapod transition and that have been known for decades:</p>

<ul><li><p>Fish, including fish with bones, lived on the earth before tetrapods appeared. Specifically, fossils of bony fish first appear in rocks from about 420 million years ago.</p></li>

<li><p>Tetrapods appear in the fossil record at a particular point in history and then persist and diversify in subsequent eons. Their arrival was long thought to have occurred about 365 million years ago, although some recent findings have challenged that hypothesis.</p></li>

<li><p>Tetrapods that still had some fishy features were prowling the planet 365 million years ago.</p></li>

<li><p>Lobe-finned fish that were starting to look more like tetrapods were eating other fish about 385 million years ago.</p></li></ul>

<p>Even many decades ago, there were hints that something interesting happened between 400 million years ago and 365 million years ago. Let's take a close look at the ancient animals that suggest the fish-to-tetrapod transition.</p>

<h3>Ancient animals</h3>

<p>The most primitive known tetrapods for which we have skeletal remains lived 365 million years ago. They were undeniably tetrapods, but there was definitely something fishy about them. (Heh heh.) One of the most famous of these creatures is <em><a href="http://en.wikipedia.org/wiki/Acanthostega" target="_blank">Acanthostega</a></em>, discovered in 1987 by British paleontologist <a href="http://www.theclacks.org.uk/jac/" target="_blank">Jennifer Clack</a> and pictured below. <em>Acanthostega</em> is a card-carrying tetrapod, with fingers and toes. But it has a fish tail, with fin rays. Another well-known primitive tetrapod is <a href="http://en.wikipedia.org/wiki/Ichthyostega" target="_blank">Ichthyostega</a>, which lived around the same time as <em>Acanthostega</em>. Like <em>Acanthostega</em>, it is a true tetrapod, but has several odd fish-like structural features. For example, its skull is more fish-like than that of <em>Acanthostega</em>. In summary, both <em>Acanthostega</em> and <em>Ichthyostega</em> already used the limb blueprint, even though both also had some fish-like anatomical characteristics. Their presence 365 million years ago shows that tetrapods must be at least that old, and their mixture of anatomical features suggests that the transition happened not long before that.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/Acanthostega_gunnari.jpg" alt="" width="570" height="384"  /></p>

<p>And what about the lobe-finned fish that looked a bit tetrapod-ish? That animal is <em><a href="http://en.wikipedia.org/wiki/Panderichthys" target="_blank">Panderichthys</a></em>, described as <a href="http://uppsala.academia.edu/PerAhlberg/Papers/385019/A_Firm_Step_From_Water_to_Land" target="_blank">“vaguely crocodile-shaped”</a> with skeletal features that were tetrapod-like. Specifically, this ancient fish had tetrapod-like “shoulders,” and <a href="http://www.nature.com/nature/journal/v456/n7222/abs/nature07339.html" target="_blank">recent analysis</a> found some finger-like bones at the ends of the fins. The creature also had a breathing hole on the top of its head. These fish lived around 385 million years ago.</p>

<h3>The hunt for the earliest tetrapods</h3>

<p>Taken together, these observations suggested that the fish-to-tetrapod transition occurred between 385 and 365 million years ago. Eager to see what that transition looked like, scientists began to look for 375 million-year-old rocks in which they might find animals at the beginning of tetrapod-hood. They wanted to catch evolution in the act.</p>

<p>Let's stop and think about this, because it's cool and because it's important to note the extent to which evolutionary biology is hypothesis-driven. Critics of evolution sometimes portray the theory as an untestable historical conjecture, depicting it as fundamentally different from experimental science in the lab. But the hunt for the earliest tetrapods was an effort to test a hypothesis that had generated a prediction. Based on the hypothesis that lobe-finned fish were ancestors of tetrapods, scientists predicted that intermediate animals, “fishapods,” would be found in the gap between <em>Panderichthys</em> and <em>Acanthostega</em>. To evaluate the prediction, all they needed to do was find some suitable 375 million-year-old rocks.</p>

<p>Neil Shubin describes that search in the first chapter of <a href="http://books.google.com/books?id=c008kdNwR1cC" target="_blank"><em>Your Inner Fish</em></a>. He and his colleagues found suitable rocks in the islands of the Arctic: the right age, nicely exposed (by erosion), and representative of the kind of environment that their quarry would frequent – freshwater streams. They made their biggest discovery on their last trip (“a do-or-die situation”) in 2004. That discovery was <em>Tiktaalik roseae</em>, the “fishapod.”</p>

<h3>The “fishapod”</h3>

<p><em>Tiktaalik roseae</em> is one of the most extraordinary fossil intermediates ever described, and its public debut in 2006 was <a href="http://www.time.com/time/magazine/article/0,9171,1181611,00.html" target="_blank">front-page news</a>. An artist's conception of the animal is pictured below.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/Tiktaalik_roseae_life_restor.jpg" alt="" width="570" height="333"  /></p>

<p>There are several aspects of the anatomy of <em>Tiktaalik</em> that earn it the title “fishapod.” Like a good fish, it had scales and webbed fins. Like a tetrapod (more specifically, like a crocodile), it had a flat head, with eyes on the top of the head, and it had a neck. But what about those fins? Or are they limbs? Remarkably, the answer seems to be, “both.”</p>

<p>The fins of <em>Tiktaalik</em> were part fish fin, part tetrapod limb. On the outside, they looked like fins, with webbing. On the inside, though, these fins were clearly tetrapod-like. Amazingly, the fins of Tiktaalik were built using a primitive version of the limb blueprint: one bone, two bones, blobs, digits. As Shubin writes in <em>Your Inner Fish</em>, “We had a fish with a wrist.” (The <a href="http://tiktaalik.uchicago.edu/index.html" target="_blank"><em>Tiktaalik roseae</em></a> web site at the University of Chicago is a great source for images and more information.)</p>

<p>Let's address three questions about <em>Tiktaalik</em> that might have occurred to you. First, why might animals like <em>Tiktaalik</em> have developed tetrapod-like fins? Shubin and his colleagues <a href="http://tiktaalik.uchicago.edu/meetTik3.html" target="_blank">suggest</a> that these limb-like fins may have been useful for doing “push-ups” in the shallow water. (Like <em>Panderichthys</em>, <em>Tiktaalik</em> had a breathing hole on top of its head and was clearly adapted for living and moving in shallow water.) Second, is <em>Tiktaalik</em> an ancestor of all tetrapods? No, not necessarily. What <em>Tiktaalik</em> shows us is that animals were developing tetrapod features in the context of fish bodies, and <em>Tiktaalik</em> shows us the context (shallow water) in which this likely occurred. But that doesn't mean that our lineage arose from <em>Tiktaalik</em> itself. Finally, is <em>Tiktaalik</em> now the oldest tetrapod? No, apparently not. For one thing, <em>Tiktaalik</em> is truly transitional, and probably therefore not worthy of full tetrapod membership. But more notably, data published in 2010 show that <a href="http://pandasthumb.org/archives/2010/01/tetrapods-are-o.html" target="_blank">tetrapods are a lot older</a> than was thought at the time of <em>Tiktaalik</em>'s discovery. The new findings show footprints that are unmistakably those of a tetrapod, in rocks about 395 million years old. Surprisingly, then, tetrapods were already on their way long before Neil Shubin's specimen lived. Tiktaalik is truly a fish/tetrapod intermediate, which was living at the same time as animals that were fully tetrapods. A simple story of succession, in which intermediates disappear and are replaced by less intermediate types, seems to be an oversimplification.</p>

<p>In conclusion, the fossil record provides evidence that the fins of fish and the limbs of tetrapods are related by ancestry: limbs seem to be modified versions of fins. What other evidence supports this proposal? In the next post, we will turn to developmental biology, and explore the meaning of the term 'homology.'</p>

<h3>Further reading:</h3>

<p>Neil Shubin (2009) <a href="http://books.google.com/books?id=c008kdNwR1cC" target="_blank"><em>Your Inner Fish: A Journey Into the 3.5-Billion-Year History of the Human Body</em></a>. New York: Vintage Books.</p>
<p>Carl Zimmer (2006) <a href="http://ngm.nationalgeographic.com/2006/11/evolution/zimmer-text/1" target="_blank"><em>A Fin is a Limb is a Wing: How Evolution Fashioned its Masterworks</em></a>. Online at NationalGeographic.com.</p>
<p><a href="http://tiktaalik.uchicago.edu/" target="_blank">Tiktaalik roseae</a> website at the University of Chicago.</p>
<p><a href="http://www.theclacks.org.uk/jac/" target="_blank">Jennifer Clack's website</a> at the University of Cambridge.</p>

<p class="date">Images are from Wikipedia.</p>]]></content:encoded>
        <pubDate>Fri, 16 Sep 11 04:59:54 -0700</pubDate>
        <dc:creator>Stephen Matheson</dc:creator>
        <!--<dc:date>Sep 16, 2011 04:59</dc:date>-->
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        <title>The Cambrian &apos;Explosion&apos;, Transitional Forms, and the Tree of Life</title>
        <link>http://biologos.org/essays/the&#45;cambrian&#45;explosion&#45;transitional&#45;forms&#45;and&#45;the&#45;tree&#45;of&#45;life?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/essays/the&#45;cambrian&#45;explosion&#45;transitional&#45;forms&#45;and&#45;the&#45;tree&#45;of&#45;life?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Geologist Keith Miller examines the &quot;Cambrian Explosion&quot;, a period of rapid evolutionary diversification approximately 575 million years ago, and whether it poses a challenge to evolutionary theory.</description>
        <content:encoded><![CDATA[Geologist Keith Miller examines the "Cambrian Explosion", a period of rapid evolutionary diversification approximately 575 million years ago, and whether it poses a challenge to evolutionary theory.]]></content:encoded>
        <pubDate>Mon, 02 May 11 18:45:49 -0700</pubDate>
        <dc:creator>Keith Miller</dc:creator>
        <!--<dc:date>May 02, 2011 18:45</dc:date>-->
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        <title>Adventist Origins of Young Earth Creationism</title>
        <link>http://biologos.org/essays/adventist&#45;origins&#45;of&#45;young&#45;earth&#45;creationism?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/essays/adventist&#45;origins&#45;of&#45;young&#45;earth&#45;creationism?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Many evangelicals believe that Young Earth Creationism is the only authentic, biblical way for Christians to understand origins, and that until the advent of Darwin&apos;s theory of evolution, it was the only view held by Christians. However, in this excerpt from Saving Darwin, Karl Giberson explains that Young Earth Creationism&apos;s origins are surprisingly recent.</description>
        <content:encoded><![CDATA[Many evangelicals believe that Young Earth Creationism is the only authentic, biblical way for Christians to understand origins, and that until the advent of Darwin's theory of evolution, it was the <em>only</em> view held by Christians. However, in this excerpt from <em>Saving Darwin</em>, Karl Giberson explains that Young Earth Creationism's origins are surprisingly recent. ]]></content:encoded>
        <pubDate>Mon, 25 Apr 11 17:36:54 -0700</pubDate>
        <dc:creator>Karl Giberson</dc:creator>
        <!--<dc:date>Apr 25, 2011 17:36</dc:date>-->
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            <item>
        <title>Christian Geologists on Noah’s Flood: Biblical and Scientific Shortcomings of Flood Geology</title>
        <link>http://biologos.org/essays/christian&#45;geologists&#45;on&#45;noahs&#45;flood&#45;biblical&#45;and&#45;scientific&#45;shortcomings&#45;of?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/essays/christian&#45;geologists&#45;on&#45;noahs&#45;flood&#45;biblical&#45;and&#45;scientific&#45;shortcomings&#45;of?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Geologists Davidson and Wolgemuth address the widely promulgated notion that the Flood can account for the earth’s complex geology, and that all genuine Christians should accept this viewpoint.</description>
        <content:encoded><![CDATA[Geologists Davidson and Wolgemuth address the widely promulgated notion that the Flood can account for the earth’s complex geology, and that all genuine Christians should accept this viewpoint.]]></content:encoded>
        <pubDate>Mon, 25 Apr 11 17:09:05 -0700</pubDate>
        <dc:creator>Gregg Davidson and Ken Wolgemuth</dc:creator>
        <!--<dc:date>Apr 25, 2011 17:09</dc:date>-->
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        <title>Series: The Cambrian &quot;Explosion&quot;, Transitional Forms, and the Tree of Life</title>
        <link>http://biologos.org/blog/series/cambrian&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/cambrian&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Many evolutionary critics have identified the Cambrian Explosion as a stumbling block to the theory of evolution, arguing that the “expected transitions between major invertebrate phyla are absent, and that the suddenness of their appearance in the fossil record demonstrates that evolutionary explanations are not viable.” Keith Miller argues that the Cambrian Explosion is not so problematic as these opponents claim after all.</description>
        <content:encoded><![CDATA[<p class="intro">This is part one in a series by Keith Miller. It is an updated and extension of Miller and Campbell's 2003 essay “The ‘Cambrian explosion’: A challenge to evolutionary theory?” from the book <em>Perspectives on an Evolving Creation: Grand Rapids</em>, and it coincides with our Question, <a href="/questions/cambrian-explosion">"Does the Cambrian Explosion pose a challenge to evolution?"</a>. A pdf version of Miller's full paper can be found <a href="http://biologos.org/uploads/projects/miller_white_paper.pdf">here</a>.</p>

<h3>Introduction:  What’s all the fuss?</h3>

<p><a href="http://biologos.org/uploads/static-content/cambrian_fig_1_1_large.jpg"><img src="http://biologos.org/uploads/static-content/cambrian_fig_1_1.jpg" class="mt-image-right" style="margin: 0pt 0pt 20px 20px; float: right;" /></a>The most fundamental claim of biological evolution is that all living organisms represent the outer tips of a diversifying, upward-branching tree of life (click image to enlarge).  The “tree of life” is an extremely powerful metaphor that captures the essence of evolution.   Like the branches of a tree, as we trace individual lines of descent (lineages) back into the past (down the tree) they converge with other lineages toward their common ancestors.  Similarly, these ancient lineages themselves converge with others back in time.  Thus, all organisms, both living and extinct, are ultimately connected by an unbroken chain of descent with modification to a common ancestral trunk among single-celled organisms in the distant past.</p>

<p>This tree metaphor applies as much to the emergence of the first representatives of the major groups of living invertebrates (such as annelids, snails, or arthropods) as it does to the first appearance and diversification of dinosaurs, birds, or mammals.   This early diversification of invertebrates apparently occurred around the time of the Precambrian/Cambrian boundary over a time interval of a few tens of millions of years.  This period of rapid evolutionary diversification has been called the “Cambrian Explosion.”</p>

<p>The Cambrian explosion has been the focus of extensive scientific study, discussion, and debate for decades, and is increasingly receiving attention in the popular media.   It has also received considerable recent attention by evolution critics as posing challenges to evolution.  These critics argue that the expected transitions between major invertebrate groups (phyla) are absent, and that the suddenness of their appearance in the fossil record demonstrates that evolutionary explanations are not viable.</p>

<p>What are some of the arguments of the evolution critics?  John Morris of the ICR writes:</p>

<blockquote><p>“If evolution is correct, the first life was quite simple, evolving more complexity over time. Yet the Cambrian Explosion of Life has revealed life's complexity from the start, giving evolution a black eye. The vast array of complex life that appears in the lowest (or oldest) stratigraphic layer of rock, with no apparent ancestors, goes hard against evolutionary dogma. Evolution's desperate attempt to fill this gap with more simple ancestral fossils has added more injury. ....  Think of the magnitude of this problem from an evolutionary perspective. Many and varied forms of complex multi-celled life suddenly sprang into existence without any trace of less complex predecessors. There are numerous single-celled forms at lower stratigraphic levels, but these offer scant help in solving the mystery. Not one basic type or phyla of marine invertebrate is supported by an ancestral line between single-celled life and the participants in the Cambrian Explosion, nor are the basic phyla related to one another. How did evolution ever get started?”<sup>1</sup></p></blockquote>
  
<p>Intelligent design advocate Stephen Meyer and others have written:</p>

<blockquote><p>“To say that the fauna of the Cambrian period appeared in a geologically sudden manner also implies the absence of clear transitional intermediates connecting the complex Cambrian animals with those simpler living forms found in lower strata. Indeed, in almost all cases, the body plans and structures present in Cambrian period animals have no clear morphological antecedents in earlier strata.<sup>2</sup></p></blockquote> 

<p>And:</p>

<blockquote><p>“A third feature of the Cambrian explosion (as well as the subsequent fossil record) bears mentioning. The major body plans that arise in the Cambrian period exhibit considerable morphological isolation from one another (or “disparity”) and then subsequent “stasis.” Though all Cambrian and subsequent animals fall clearly within one of a limited number of basic body plans, each of these body plans exhibits clear morphological differences (and thus disparity) from the others. The animal body plans (as represented in the fossil record) do not grade imperceptibly one into another, either at a specific time in geological history or over the course of geological history. Instead, the body plans of the animals characterizing the separate phyla maintain their distinctive morphological and organizational features and thus their isolation from one another, over time.”<sup>3</sup></p></blockquote> 

<p>Are these critiques warranted?  To what extent is the Cambrian explosion really problematic for the evolutionary picture of an unbroken tree of life extending back to the earliest life on Earth?</p>

<h3>Geologic Time Scales:  How big was the bang?</h3>

<p>The relative rapidity of the diversification of invertebrates during the Cambrian “explosion” is set against the backdrop of the Earth’s geologic and biologic history.  Geologic time is unfamiliar to most people, and its shear vastness is difficult to grasp.</p>

<p>Two lines of evidence impact our understanding of the duration of the animal diversification that led to the appearance of the major groups of living invertebrates.  The first is the dating of critical strata within the geological timeline such as the Precambrian-Cambrian boundary and various important fossil-bearing horizons.  The second is the time of appearance of the first widely recognized fossil representatives of the major living groups (phyla) of invertebrate animals.  The latter is in considerable flux as new fossil discoveries are made.</p>

<p>Originally, the base of the Cambrian had been set at the earliest appearance of organisms with mineralized skeletons - particularly trilobites.  However, a diverse collection of tiny mineralized plates, tubes and scales was discovered to lie below the earliest trilobites.<sup>4</sup> This interval of “small shelly fossils” was designated the Tommotian.  Because of the presence of even earlier tiny mineralized tubes and simple burrows, there was no internationally accepted definition for the boundary until 1994.  At that time, the base of the Cambrian was placed at the first appearance of a particular collection of small fossil burrows characterized by <em>Treptichnus pedum</em>.</p>  

<p align="center"><img src="http://biologos.org/uploads/static-content/cambrian_fig_1_2.jpg"></p>

<p>Until the early 1990's the age of the Precambrian-Cambrian boundary was not tightly constrained, and was estimated to be about 575 million years ago.  However, in 1993 new radiometric dates from close to the accepted Precambrian-Cambrian boundary revealed that it was significantly younger -- about 544 million years.<sup>5</sup> A more precise date of 542 ± 0.3 million years has recently been formally accepted by the International Commission on Stratigraphy.  The basis for this date was the discovery that a sharp worldwide fall (or negative spike) in the abundance of the isotope carbon-13 was coincident with the Cambrian boundary as previously defined.   In Oman, this isotopic marker also coincides with a volcanic ash layer that yielded the 542 million year date using uranium/lead radiometric methods.<sup>6</sup>  This horizon also marks the last occurrence of several fossils characteristic of the underling late Precambrian Ediacaran Period.<sup>7</sup>   Such extinction events are commonly used to subdivide the geologic time scale.</p>

<p>The earliest diverse fossil invertebrate communities of the Cambrian are represented by the Chengjiang, in China.  These deposits are dated at 525-520 million years.  The famous Burgess Shale is considerably younger, dating at about 505 million years, and the end of the Cambrian Period is set at 490 million years.  The Cambrian Period thus lasted for 52 million years. <em>To put this in perspective, the time elapsed since the extinction of the dinosaurs at the end of the Cretaceous has been 65 million years.  The Cambrian was a very long period of time</em>.</p>

<p>If the Cambrian explosion is understood to comprise the time from the base of the Cambrian to the Chengjiang fossil beds, then this period of diversification in animal body plans appears to have lasted about 20 million years.  However, not all living animal phyla with a fossil record first appear within this time window.  The colonial skeleton-bearing <a onclick="toggle_visibility('image1');">bryozoans</a>, (click for image) for example, are not known from the fossil record until the end of the Cambrian around 491 million years ago.<sup>8</sup>   More significantly, several living invertebrate phyla have a fossil record that extends into the late Neoproterozoic before the Cambrian.  <a onclick="toggle_visibility('image2');">Sponges</a> (click for image) have been recognized as early as 580 million years, <a onclick="toggle_visibility('image3');">cnidarians</a> (click for image--the group includes jellyfish and anemones) are present among the Ediacaran animals at around 555 million years, and the stem groups (see discussion below) for some other phyla were also likely part of the Ediacaran communities.</p>

<div id="image1" style="display:none;"><p align="center"><img src="http://biologos.org/uploads/static-content/cambrian_fig_1_3.jpg"></p></div>
<div id="image2" style="display:none;"><p align="center"><img src="http://biologos.org/uploads/static-content/cambrian_fig_1_4.jpg"></p></div>
<div id="image3" style="display:none;"><p align="center"><img src="http://biologos.org/uploads/static-content/cambrian_fig_1_5.jpg"></p></div>

<p>Defining the Cambrian “explosion” is not as straightforward as it might seem.  Although there was clearly a major burst of evolutionary innovation and diversification in the first 20 million years or so of the Cambrian, this was preceded by an extended period of about 40 million years during which metazoans (multicellular animals) arose and attained critical levels of anatomical complexity.   The Ediacaran saw the appearance of organisms with the fundamental features that would characterize the later Cambrian organisms (such as three tissue layers, and bilaterally symmetric bodies with a mouth and anus), as well as the first representatives of modern phyla.  The base of the Cambrian is not marked by a sharp dramatic appearance of living phyla without Precambrian roots.  It is a subjectively defined point in a continuum.  The Cambrian “explosion” appears to have had a “long fuse.”</p>

<h3>Notes</h3>
<p class="date">1. Morris, J.D., 2008, The Burgess shale and complex life, <em>Acts & Facts</em> 37 (10): 13.<br>

2. Meyer, S.C., M. Ross, P. Nelson, & P. Chien. 2003. The Cambrian explosion: biology's big bang. Pp. 323-402 in J. A. Campbell & S. C. Meyer, eds., <em>Darwinism, Design and Public Education</em>: Michigan State University Press, Lansing, p. 326.<br>

3. Meyer, S.C., M. Ross, P. Nelson, & P. Chien. 2003. The Cambrian explosion: biology's big bang. Pp. 323-402 in J. A. Campbell & S. C. Meyer, eds., <em>Darwinism, Design and Public Education</em>: Michigan State University Press, Lansing, p. 333.<br>

4. Rozanov, A.Y., 1984, “The Precambrian-Cambrian boundary in Siberia,” Episodes 7: 20-24.  Rozanov, A.Y., and A.Y. Zhuravlev, 1992, “The Lower Cambrian fossil record of the Soviet Union,” IN J.H. Lipps and P.W. Signor (eds.), <em>Origin and Early Evolution of the Metazoa</em>: Plenum, New York, p.205-282.<br>

5. Bowring, S.A,, J.P. Grotzinger, C.E. Isachsen, A.H. Knoll, S.M. Pelechaty, and P. Kolosov, 1993, “Calibrating rates of Early Cambrian evolution,” <em>Science</em> 261: 1293-1298.<br>

6. Gradstein, F.M.,  J.G.Ogg, A.G. Smith, et. al., 2004. <em>A Geologic Time Scale</em> 2004. Cambridge University Press.<br>

7. Amthor, J. E.; J.P. Grotzinger,; S. Schröder, S.A. Bowring, J. Ramezani, M.W. Martin, and A. Matter, 2003, "Extinction of <em>Cloudina</em> and <em>Namacalathus</em> at the Precambrian-Cambrian boundary in Oman". <em>Geology</em> 31: 431–434.<br>

8. Landing, E., A. English,and J.D. Keppie, 2010, “Cambrian origin of all skeletonized metazoan phyla - Discovery of Earth’s oldest bryozoans (Upper Cambrian, southern Mexico),” <em>Geology</em> 38: 547-550.</p>]]></content:encoded>
        <pubDate>Fri, 11 Mar 11 08:00:11 -0800</pubDate>
        <dc:creator>Keith Miller</dc:creator>
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        <title>The Second Creation Story and &quot;Atrahasis&quot;</title>
        <link>http://biologos.org/blog/the&#45;second&#45;creation&#45;story&#45;and&#45;atrahasis?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/the&#45;second&#45;creation&#45;story&#45;and&#45;atrahasis?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Atrahasis is important to biblical scholars because of it similarity to Genesis 2&#45;9. Both stories share a similar storyline: creation, population growth and rebellion, flood. They also share some important details within that storyline.</description>
        <content:encoded><![CDATA[<p>Last week we looked at Genesis 1 and <em>Enuma Elish</em>. Another very important discovery in Ashurbanipal’s library is the story commonly referred to as the <em>Atrahasis Epic</em>. Though in the nineteenth century only fragments of the story were found, a more complete version was found in 1965, dated to the seventeenth century B.C.</p>

<p><em>Atrahasis</em> is the name of the Noah-like figure in this story and it means “exceedingly wise.” The <em>Atrahasis Epic</em> and another ancient story called the <em>Gilgamesh Epic</em> overlap a lot with the biblical flood story. We will get to that issue in a future post. <em>Atrahasis</em>, however, is more than just a flood story. It is a story of the origins of the gods (theogony) and of the cosmos (cosmogony).</p>

<p><em>Atrahasis</em> is important to biblical scholars because of it similarity to Genesis 2-9. Both stories share a similar storyline: creation, population growth and rebellion, flood. They also share some important details within that storyline.</p>

<p>The degree of overlap between the stories suggests to some scholars that Genesis 2-9 may be an Israelite version of <em>Atrahasis</em>, although it is best not to be dogmatic about that. It is very clear, however, that there is a lot of conceptual overlap between them.</p>

<p>The best way to show the similarities between these stories is in a chart. The one below is from Daniel Harlow, which is adapted from a chart by Bernard F. Batto<sup>1</sup>.  I have made slight adjustments for clarity.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/atrahasis_table.jpg"></p>

<p>It goes without saying that there are clear differences between the stories (which we will see in more detail when we get to the flood story). But, just as we saw last week with Genesis 1 and <em>Enuma Elish</em>, (1)  the differences only stand out because of the similarities, (2) the differences do not justify minimizing the <em>similarities</em>.</p>

<p>As we saw with Genesis 1 and <em>Enuma Elish</em>, Genesis 2-9 and <em>Atrahasis</em> breathe the same air. They share ancient Mesopotamian ways of talking about origins. This is a clear indication that the second creation story does not speak to contemporary science. Hence, (1) it cannot and should not be harmonized with contemporary science, (2) it should not control what can be concluded from scientific investigation.</p>

<p>Genesis 2-9 is an ancient story asking addressing ancient issues. Understanding that ancient context will keep us from asking this story to deliver more than it is prepared to. And it will also help us mine the theological depths of what this story said <em>to ancient Israelites</em> nearly three millennia ago.</p>

<p>Israel’s two creation stories are clearly distinct, which makes one ask why there are two to begin with and why they are placed side-by-side as they are. Unfortunately, Genesis does not come with an introduction explaining why the author did what he did.</p>

<p>The conventional scholarly explanation is a bit involved, but here is the main outline. The second creation story in Genesis is actually Israel’s older creation story, written perhaps sometime during the early period of the monarchy and fully engaged with common Mesopotamian traditions. The first creation story in Genesis was written second, after the return from Exile (539 B.C.), and was influenced by Israel’s long experience in Babylon captivity.</p>

<p>Genesis 1 highlights God’s complete control over creation, employing and transforming familiar Mesopotamian themes such as the <a href="http://biologos.org/blog/yahweh-creation-and-the-cosmic-battle/">cosmic battle</a> motif. That story was placed at the beginning of Israel’s Scripture. The older creation story was edited to reflect its new position as subordinate to Genesis 1.</p>

<p>As I have suggested in previous <a href="http://biologos.org/blog/adam-is-israel/">posts</a>, one way of looking at it is this: What had been Israel’s original story of creation (the Adam story) was transformed to a story of <em>Israel’s</em> creation.</p>

<p>As I stressed earlier, such a suggestion is not meant to cut off discussion but promote it. The meaning of Israel’s creation accounts has been pondered since before the time of Christ, and no one should think that conversation has come to an end in an internet post or two.</p>

<p>Whatever one concludes about Israel’s creation stories, the extra-biblical stories should not be kept at arm’s length from Genesis. They are clearly very important for understanding the nature of Genesis and what it means to understand it properly today.</p>

<h3>Notes</h3>
<p class="date">1. Harlow, professor at Calvin College, gave a lecture at the ASA meeting at Baylor University in August 2009, “After Adam: Reading Genesis in an Age of Evolutionary Science.” That lecture will appear in <em>Perspectives on Science and Christian Faith</em> in an upcoming issue. Batto’s chart can be found in his classic <em>Slaying the Dragon: Mythmaking in the Biblical Tradition</em> (Westminster John Knox, 1992), pp. 51-52.</p>]]></content:encoded>
        <pubDate>Tue, 25 May 10 09:00:34 -0700</pubDate>
        <dc:creator>Pete Enns</dc:creator>
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        <title>Series: The Flood: Not Global, Barely Local, Mostly Theological</title>
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        <description>The three part series, written by Paul Seely, explores the scientific validity of the Flood in Genesis. He offers the approximate date of the flood according to Scripture, and then looks at various lines of evidence that contradict the idea of a global flood at that time. In light of other Mesopotamian flood stories, scholars conclude that the flood was local at best. In the end, he suggests that this story primarily reveals theological truths from a limited scientific understanding of natural events.</description>
        <content:encoded><![CDATA[<h3>Part Two: Noah’s Flood was Barely Local</h3>

<p>There are so many close similarities between the biblical Flood account and the Mesopotamian accounts that conservative scholars like Alexander Heidel, Merril Unger, Donald Wiseman, John Walton and others have concluded that the biblical and Mesopotamian flood accounts go back to a common tradition about the same flood.<sup>1</sup>  This means if we can locate the flood mentioned in the Mesopotamian accounts, we will have located the biblical flood.</p>

<p>Working from inscriptions and the <em>Sumerian King List</em>, the Sumerian Noah, Ziusudra, who lived in the city of Shuruppak, can be roughly dated to c. 2850 B.C. This agrees quite closely with the date of the only Mesopotamian flood that left simultaneous deposits in three locations (Shuruppak, Uruk, and Kish). A number of ancient Near Eastern scholars have, therefore, concluded that this flood is probably the one mentioned in the Mesopotamian and biblical accounts.<sup>2</sup></p> 

<p>Historian Jack Finegan writes,</p>
<blockquote>Since in Sumerian tradition Shuruppak was the last ruling city before the flood and Kish was the first thereafter, it was presumably the inundation attested at Shuruppak between the Jemdet Nasr and Early Dynastic periods (and at Uruk and Kish at about the same time) that was the historic flood so long remembered.  The date was about 2900.<sup>3</sup></blockquote><br />

<p>It is plausible that the Mesopotamian flood of c. 2900 B.C. was the historical basis of the biblical account. A Mesopotamian flood theory is the only flood theory that explains the fact that no other flood stories are anywhere near as close to the biblical account as the Mesopotamian accounts.<sup>4</sup>  It is also the only flood theory that agrees with the biblical description of the sources of the Flood’s water as all being <em>fresh</em> water sources.<sup>5</sup></p>

<p>So, there is an objective basis for an actual biblical Flood. Why then do I title this post “<em>Barely</em> Local?” The answer is that neither the flood of 2900 B.C. nor any other actual local flood, such as the Black Sea flood, nor the melting of ice caps at various historical points closely fits the biblical description. Local flood theories do not fit the biblical account with regard to secondary issues such as lasting one year and destroying all the birds (even in a local area). More importantly, no local flood theory agrees with the biblical account at the most critical points: landing the ark in the Ararat mountains, covering the entire Near East (Genesis 9:19, “all the earth” = Genesis 10), establishing Noah as a new Adam, i.e., as a new beginning of the human race<sup>6</sup>, and dismantling the universe by reversing creation days two and three.<sup>7</sup></p> 

<p>We can say then that the biblical account may well be based upon an actual Mesopotamian flood and therefore is not properly designated a myth. At the same time, it is evident from geology, anthropology and archaeology that the above mentioned four critical points in the biblical description, which go well beyond the scope of a local flood, cannot be regarded as actual, factual history. The biblical account would, therefore, be properly described as Legend (or better, Parabolic Legend, as I will describe in my third post).</p> 

<p>A fact often missing from the discussion of whether the Flood is global or local is the fact that Genesis 1-11 is accommodated to the limited scientific knowledge of the Israelites. We see this in the Flood account’s definition of  “the whole earth.” Genesis 9:19, “These three were the sons of Noah: and of these was the whole earth overspread,” leads us to the author’s definition of “the whole earth.” It is the area overspread by the descendants of the three sons of Noah. Contextually, this area is set forth in Genesis 10. The “whole earth” according to the (final) author of Genesis 6-10 is thus the greater Near East.</p>

<p>This contextual definition of “the whole earth” excludes the usual ideas of a limited local flood as well as the idea that the Flood is described in Scripture as covering our modern globe. The biblical account is not written from the perspective of God’s knowledge of geography but is accommodated to the Israelites’ limited knowledge, wherein “the whole earth” both extends to and is limited to the greater Near East.</p>

<p>In addition, the sources of the Flood’s waters in Scripture depend upon an ocean above the sky and beneath the earth. The account is thus divinely accommodated to the ancient Israelites’ view of the universe.<sup>8</sup>  Since it involves ancient Near Eastern “science,” which has since been superseded, the biblical description is not all actual-factual. The biblical account is, in fact, much grander than the actual event, a point that we will look at in my third and final post.</p>

<h3>Notes</h3>
<p class="date">1. Alexander Heidel, <em>The Gilgamesh Epic and Old Testament Parallels</em> (Chicago: University of Chicago Press, 1946, 1949) 260.  See a list of similarities in Gordon Wenham, Genesis 1-15 (Waco, TX: Word, 1987) 163–64; Merrill F. Unger, <em>Archaeology and the Old Testament</em> (Grand Rapids: Zondervan, 1954) 68; Donald J. Wiseman, <em>Illustrations from Biblical Archaeology</em> (London: Tyndale, 1958) 8;   John H. Walton, <em>Ancient Israelite Literature in its Cultural Context</em> (Grand Rapids: Zondervan, 1989) 40.</p>
<p class="date">2. William W. Hallo and William Kelly Simpson, <em>The Ancient Near East: A History</em> (New York: Harcourt Brace Jovanovich, 1971) 35–36; Mallowan, "Noah's Flood Reconsidered," 81; Samuel Noah Kramer, "Reflections on the Mesopotamian Flood: The Cuneiform Data New and Old," Expedition 9:4 (Summer, 1967) 18; H. W. F. Saggs, <em>Babylonians</em> (Berkeley: University of California Press, c2000) 39.</p>
<p class="date">3. Jack Finegan, <em>Archaeological History of the Ancient Middle East</em> (Boulder, Colo.: Westview Press, 1979) 26.</p>
<p class="date">4. John Bright, “Has Archaeology Found Evidence of the Flood?” <em>The Biblical Archaeologist 5</em> (1942) 56; Derek Kidner, <em>Genesis</em> (Chicago: Inter-Varsity, 1967) 96; Bruce K. Waltke, <em>Genesis</em> (Grand Rapids: Zondervan, 2001) 132.</p>
<p class="date">5. Rain is obviously fresh water, and see Gerhard F. Hasel, “The Fountains of the Great Deep,” <em>Origins 1</em> (1974): 67-72.</p>
<p class="date">6. Kenneth Mathews, <em>Genesis 1–11:26</em> (Nashville: Broadmans, 1996) 351, 398. The fact that Noah is taking the place of Adam as a new beginning for mankind has been widely recognized for centuries, e.g., “Noah was the beginning of our race” (Justin Martyr, <em>Dial</em> 19, ANF 1:204); “Noah, the second father of mankind” (Charles John Ellicott, <em>Ellicott’s Commentary on the Whole Bible</em> [c. 1863; repr., Grand Rapids: Zondervan, 1959], 1:44); “the second origin of the human race” (Benjamin B. Warfield, “The Biblical Idea of Revelation,” in <em>The Inspiration and Authority of the Bible</em> [Philadephia: Presbyterian & Reformed, 1948], 78); “Adam the father of all humanity and Noah its father in the post-diluvian world” (Bruce Waltke, <em>Genesis</em> [Grand Rapids: Zondervan, 2001], 127); “Noah is a second Adam,” Victor Hamilton, <em>The Book of Genesis Chapters 1–17</em> [Grand Rapids: Eerdmans, 1990], 313).</p>
<p class="date">7. Hamilton, <em>The Book of Genesis</em>, 291; Mathews, <em>Genesis</em>, 351, see 376; Walter Brown, <em>The Ethos of the Cosmos</em> (Grand Rapids: Eerdmans, 1999) 54, cited in John H. Walton, <em>Genesis</em> (Grand Rapids: Zondervan, 2001) 331; Waltke, <em>Genesis</em>, 139; Gordon Wenham, <em>Genesis 1–15</em> (Waco, Tex.: Word, 1987) 181.</p>
<p class="date">8. For more details on the accommodation of the Flood account, see my paper, “Noah’s Flood: Its Date, Extent, and Divine Accommodation,” <em>Westminster Theological Journal 66</em> (2004) 291-311.</p>]]></content:encoded>
        <pubDate>Fri, 05 Feb 10 08:00:05 -0800</pubDate>
        <dc:creator>Paul Seely</dc:creator>
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        <title>Understanding Earth</title>
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        <description>When we read Genesis 1.1: &quot;in the beginning God created the heavens and earth&quot; we picture the origin of the atmosphere, space, solar systems, and galaxies. But in Genesis 1 &quot;earth&quot; does not mean the planet Earth.</description>
        <content:encoded><![CDATA[<p><strong>Every Friday, &quot;Science and the Sacred&quot; features an essay from a guest voice in the science and religion dialogue. This week's guest entry was written by Karen Strand Winslow, Ph.D., a Professor of Biblical Studies at the Graduate School of Theology, Azusa Pacific University.  </strong></p>
<p>When we read Genesis 1.1: &quot;in the beginning God created the heavens and earth&quot; we picture the origin of the atmosphere, space, solar systems, and galaxies. We think of the creation of the planet in our solar system named &quot;Earth,&quot; whose shape is an oblate spheroid or a rotationally symmetric ellipsoid. This mental picture is natural, because the English term &quot;Earth&quot; is the name of the planet in this solar system on which humans reside. But in Genesis 1 &quot;earth&quot; does not mean the planet Earth. Genesis reports the origin of the &quot;heavens and earth&quot; as such terms meant in the author's time and within his worldview, which did not include a twenty-first century acquaintance with astronomy. What does &quot;earth&quot; mean in Genesis 1? The answer is provided in the text itself.</p>
<p>Genesis 1.1 &quot;In the beginning God created <em>ha-shamayim</em> and <em>ha-aretz</em> [earth].&quot; Genesis 1.1 is a title for what is to follow. Genesis 1.2a &quot;The earth [<em>ha-aretz</em>] was without form and void&quot; (there was no earth yet). After God created light, named day and night, and made a firmament (the heavens or sky) to divide the waters, God made <em>ha-aretz</em>.</p>
<p>Genesis 1.9 &quot;And God said, 'Let the waters under the sky [<em>ha-shamayim</em>] be gathered together into one place, and let the dry land [<em>ha-yabbashah</em>] appear.' And it was so. 10 God called the dry land <em>eretz</em> [English: &quot;earth&quot;] and the waters that were gathered together he called seas. . . . &quot;</p>
<p><em><strong>Ha-aretz</strong></em><strong> is &quot;dry land&quot; [Hebrew: <em>ha-yabbashah</em>].</strong> God created land from which seed bearing plants and fruit trees would emerge and on which the creepers would creep. To the biblical writer, this land was not a planet or a globe spinning on its axis or orbiting the sun along with other planets.</p>
<p>Genesis 1 explains the origins of <strong>the land</strong> on which people live, farm, and travel. <em>Ha-aretz</em> is often a synonym for <em>ha-adamah</em>, &quot;ground&quot; in the Bible. Throughout the rest of Genesis, the biblical writers use <em>ha-aretz</em> to describe one's <em>homeland, property, farmland,</em> other <em>regions</em>, and bowing to <em>the ground</em>. <em>Eretz</em> is translated by the English term &quot;earth&quot; 660 times, and usually it refers to ground, soil, or the place where one is standing. In these cases, <em>eretz</em> is a synonym for the Hebrew <em>adamah</em>, the stuff from which <em>adam</em> is made in Genesis 2.7. The same term is translated by the English &quot;land&quot; or &quot;country&quot; 1,620 times in the Revised Standard Version, meaning location or place, boundaried or unboundaried, as in countryside. In addition, <em>ha-aretz</em> can mean the realm of all creatures, the realm or habitation of the living (Job 28.13; Psalm 27.13). Nowhere in the Bible does &quot;earth&quot; refer to a planet. Why is this important for science and theology?</p>
<p><em>Ha-aretz</em> translated properly as &quot;land,&quot; takes the air out of controversies over whether the Genesis flood story depicts a local or &quot;universal&quot; flood, an aspect of the polemic of young earth theorists and &quot;creationists.&quot; (They suppose the earth to be less than 10,000 years old, based on adding the genealogies of Genesis. This is mixing genres--categories of literature--to develop a Western and even mathematical role for the Bible, while genealogies appear to link Abraham to Noah and Noah to Seth).</p>
<p>The term &quot;universal flood&quot; usually means that flood waters covered the entire planet. According to young earth theorists, the one-year Genesis flood laid down millions of layers of sediment across the planet, causing the earth to appear to be millions of years old. The basis of the young earth claim is the phrase &quot;<em>kol ha-aretz</em>&quot; in Genesis 7.3 and 8.9 and translated as &quot;the whole earth.&quot; For readers who have a planet in mind, this translation biases them to believe the text claims Noah was saved from a global flood.</p>
<p>But the flood story of Genesis 6-9 assumes the same worldview represented in Genesis 1 and uses the same vocabulary throughout, including <em>ha-aretz</em> to mean land or dry ground. Throughout the flood account in Genesis, <em>eretz</em> and <em>adamah</em> are used synonymously. &quot;<em>Kol ha-aretz</em>&quot; means all <em>the land</em> known to the originators of the flood story, perhaps a location around the Black or Mediterranean Seas, which would have been the &quot;world&quot; of the biblical writers. Although flood stories exist among some ancient cultures and evidence for flooding is apparent in some areas around the world, some regions have no stories or traces of flooding. The layers of sediment and fossils in North America alone demonstrate without question that a single flood could not have deposited them. The ancient texts and artifacts of Ugarit, Egypt, and Japan contain no flood narratives, and there are only a few from Africa. Thus, the closest neighbors of Israel do not &quot;remember&quot; flooding.</p>
<p>Neither is there geological data to support a global flood around ten thousand years ago. Eight times more water than is now on earth would have been required for waters to cover the planet. There would have been the need for a new creation to restore the earth after the flood, because salt water destroys vegetation. Certain geological phenomena would have been destroyed if there had been a global flood. In Auvergne, France, there are cones of scoria and ashes from long extinct volcanoes, but there are no signs of effects of water. In addition, the 35,000 year old cave drawings from the Dordogne area of France (and countless other extant artifacts) would have been destroyed by a global flood.</p>
<p>The Bible was not intended as a primitive science manual that presented rudimentary scientific facts that would be verifiable at a later date when science caught up. When the biblical writers refer to &quot;all the land&quot; or even &quot;the whole world,&quot; they refer to <em>their</em> whole world, not ours; they were not thinking of a planet, because they did not know they were living on a planet.</p>
<p>By observing the known world in all its magnificence--noticing, distinguishing, and naming its grandest features--Genesis 1, Psalm 104, Job 38 and Isaiah exemplify fundamentals of science--observation and organizing, but they are primarily theological. They cause us to worship God, as creator of all that is.</p>]]></content:encoded>
        <pubDate>Fri, 25 Sep 09 17:00:30 -0700</pubDate>
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        <title>In The Bones</title>
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        <description>I am a fan of the blog &quot;Jesus Creed.&quot; Recently it published an interesting post about the transition from fins to limbs as evidenced by fossils of an organism trapped in sediment 375 million years ago.</description>
        <content:encoded><![CDATA[<p>I am a fan of the blog &quot;Jesus Creed.&quot; Recently it published an interesting post about the transition from fins to limbs as evidenced by fossils of an organism trapped in sediment 375 million years ago.</p>
<p>The bones in the limbs of all land vertebrates are remarkably similar. Feel around your upper arm, you'll only find one bone in there -- the humerus. Now move to your lower arm. If you're thorough, you will find two bones -- the radius and the ulna. As you continue down to the wrist, there is a whole set of little bones that attach to the metacarpals of the hand and the phalanges of the fingers and thumb. If your dog is nearby, see if he will let you continue your experiment with him. His bones are arranged a little differently, but the setup is the same. This pattern is remarkably consistent in land vertebrates. Even marine mammals like whales have a humerus, then a radius and an ulna followed by smaller bones. Darwin noted this consistency in his book On the Origin of Species. He writes, &quot;What can be more curious than that the hand of a man, formed for grasping, that of a mole for digging, the leg of the horse, the paddle of the porpoise, and the wing of the bat, should all be constructed on the same pattern, and should include similar bones, in the same relative positions?&quot;</p>
<p>It would be fun to watch Darwin read a couple of pages from the book <em>Your Inner Fish</em> by paleontologist Neil Shubin. Shubin studies fossils of vertebrates that lived at the time of transition from water to land. As he began his project, Shubin knew that amphibian fossils were abundant in 365 million year old rock formations, but totally absent globally in formations older than 385 million years. So he and his colleague, Ted Daeschler, decided that if they were to find the intermediates between fish and amphibians, they would need to look for fossils in exposed rocks that were about 375 million years old. A simple search through a geology textbook told them only one rock formation would meet their criteria perfectly. This formation was in northern Canada and was formed by sedimentation in a river delta.</p>
<p>After a six-year-long hunt from 1998-2004, Shubin and his team unearthed a &quot;fish&quot; very different than anyone had ever seen before. They had isolated a transitional organism with many characteristics of the land animals that became abundant 10 million years later, but it also had many characteristics of fish that lived in the period just before.</p>
<p>The book is a fun read, and is perfect for all who truly seek to understand God's method of creation. Here's why Darwin would have loved the story though: Shubin predicted the characteristics of a transitional species, the age of the rock formation, the type of environment in which it would be found (a river delta) and the geographic location (northern Canada) likely to have these fossils. He and his team then went out and searched for six painstaking years -- scanning the landscape inch by inch -- until they found it. It was a transitional organism with a variety of interesting features such as a neck, which was new to vertebrate life, and scales, which were an old feature. It had a rib cage with new features that came to characterize land animals, and it had interesting limbs described in meticulous detail. Just like you and your dog, the organism had the same key bones in the right place: the humerus, the radius, the ulna, some of the bones of the wrist and even primitive bones of the foot.</p>
<p>As beautiful as this story is, it does not end there. Unlike Darwin, we now know how the specific bones of the limb are built in an embryo, and we know why the pattern is so similar among the various land vertebrates. There is a set of genes that produces signals in a developing embryo. The hox D family of genes becomes active at specific locations in a developing limb, and bone is made.</p>
<p>What this means is that one group of cells in the expanding &quot;limb bud&quot; gets the signal, &quot;make bone here.&quot; Further toward the tip of the limb bud, two blocks of cells receive the same signal, &quot;make bone here.&quot; These two blocks of cells respond by making the radius and ulna. A little bit later and further toward the tip of the limb bud, a second wave of expression of the hox D signal is active. &quot;Make bone in this region too,&quot; the signal says. The reason we all have the same pattern is that the hox D signaling pattern is very similar in the limb buds of the embryos for all land vertebrates. It can be tweaked to give variation in structure, but the basic pattern is virtually always present.</p>
<p>So what about the fins of fish? If fins gave rise to limbs in evolutionary history, one might expect they would have hox D gene expression which resembles that of limbs but would be different in a fairly significant way. The shark provides the best example; it has bones at the base of its fin. And, sure enough, in a shark embryo there is a wave of expression of the hox D genes in fin development just like in land vertebrates. Sharks don't have tiny bones that might correspond to our wrist, hand and fingers, so there are significant differences in hox D gene expression at the tip. However, the signaling pathway was already present in the fins of fish. The signal that says, &quot;make bone here,&quot; was expressed in fish at the exact same location where limbs appear in land vertebrates. The transition had already begun as fish developed fins. At the most significant level, fins and limbs share important features.</p>
<p>I have been a biologist for a long time, and I hope I never stop getting shivers in my spine when I think about the beauty of how we come to know things in biology. Biologists make predictions, then they go out into the field or the lab to see if their predictions hold up. When hundreds of predictions of this sort are fulfilled, a theory reaches the point where it becomes certain, at least on a broad level. And that is where we are with evolution.</p>
<p>In this space, our purpose is not so much to try to persuade as it is to explain why we are so certain God created this way. If you wish to join us as we explore the ramifications, we would love to have you with us in the coming days. If you think that all of biology has it wrong, that is your prerogative. You're still welcome to read and think along with us. A great place to start is the book by Neil Shubin--it is very accessible to the general audience regardless of science background. Once you've read that, irrespective of what you personally believe, you'll understand why most Christian biologists view evolution as being God's way of creating life's diversity. It is my prayer that you may even see why the beauty in all of this draws us to our knees in worship.</p>]]></content:encoded>
        <pubDate>Mon, 29 Jun 09 16:02:05 -0700</pubDate>
        <dc:creator>Darrel Falk</dc:creator>
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