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        <title>Custom Feed &#45; The BioLogos Forum</title>
    <link>http://biologos.org/resources/find/Blog/sort&#45;by&#45;Newest/sort&#45;by&#45;Newest/Evolution &#45; Evidence,Creation &amp; Origins?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
    <description>This is a custom feed of BioLogos resources. Make a new feed at http://biologos.org/resources/find</description>
    <dc:language>en</dc:language>
    <dc:rights>Copyright 2013</dc:rights>
    <dc:date>2013-06-20T05:31:06-08:00</dc:date>    
    
    

            
            
        
      <item>
        <title>God Did It (But I Don’t Exactly Know How the World Was Created)</title>
        <link>http://biologos.org/blog/god&#45;did&#45;it&#45;but&#45;i&#45;dont&#45;exactly&#45;know&#45;how&#45;the&#45;world&#45;was&#45;created?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/god&#45;did&#45;it&#45;but&#45;i&#45;dont&#45;exactly&#45;know&#45;how&#45;the&#45;world&#45;was&#45;created?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>After we both exhaled some relieved laughter, I whispered, &quot;I believe God created the world and holds it together. Just how he did that is up for debate, but whatever conclusions you come to about the earth&apos;s origins, God did it. Okay?&quot;</description>
        <content:encoded><![CDATA[<p>Carolyn Arends recently wrote an article in <a href="http://www.christianitytoday.com/ct/2012/november/god-did-it.html"><em>Christianity Today</em></a> that we thought our readers would appreciate. In it, she writes about a difficult conversation that many Christian parents have with their kids. It’s the conversation about creation—we believe God made the heavens and the earth, but did God really do it in seven literal days? If God used natural selection as one of His creative processes—does that mean that humans really evolved from monkeys? How does it change the way we read the Bible, if we choose to accept the conclusions of modern science?</p>

<p>These are tough questions, and Arends provides some helpful insight on how she’s handled them with her own kids.</p>
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        <pubDate>Mon, 10 Jun 13 09:15:23 -0700</pubDate>
        <dc:creator></dc:creator>
        <!--<dc:date>Jun 10, 2013 09:15</dc:date>-->
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        <title>A Survey of Clergy and Their Views on Origins</title>
        <link>http://biologos.org/blog/a&#45;survey&#45;of&#45;clergy&#45;and&#45;their&#45;views&#45;on&#45;origins?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/a&#45;survey&#45;of&#45;clergy&#45;and&#45;their&#45;views&#45;on&#45;origins?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>What do today’s pastors think about science? What views do they hold on creation and evolution and how strongly do they hold them? How do origins issues impact their ministries? These were just a few of the questions that motivated us at BioLogos to commission a survey of pastors on origins</description>
        <content:encoded><![CDATA[<p>What do today’s pastors think about science? &nbsp; What views do they hold on creation and evolution and how strongly do they hold them? &nbsp; How do origins issues impact their ministries?</p>

<p>These were just a few of the questions that motivated us at BioLogos to commission a survey of pastors on origins. &nbsp;In 2012, the Barna Group conducted 743 telephone interviews with pastors from across the US, from churches big and small, and from all Christian denominations. &nbsp;This comprehensive, in-depth survey provides a fascinating analysis of views held by clergy today. &nbsp; In the coming month, we’ll be digging deeper into the survey results, but for now, here are some key highlights:</p>

<h3>#1: Pastors hold a diversity of views on origins.</h3>

<p class="caption-center"><img alt="" src="http://biologos.org/uploads/static-content/clergy_views_chart.jpg" /></p>

<p>Overall, while a slight majority of the pastors surveyed fall under the label of Young Earth Creationism (54%), sizeable portions of clergy accept Progressive Creation (15%) and Theistic Evolution (18%).</p>

<p>The numbers varied widely based on a number of factors, however. Pastors of mainline churches were most likely to accept Theistic Evolution, while non-Mainline, Charismatic, and Southern Baptist pastors were overwhelmingly Young Earth Creationists. Pastors of larger churches were also more likely to accept Theistic Evolution.</p>

<p>Regionally, the highest percentage of YEC pastors was found in South, while the highest percentage of pastors accepting TE was in the Midwest. Pastors from the western states were the least likely to accept TE.</p>

<h3>#2: Most pastors think science and faith questions are important.</h3>

<p>Regardless of their views, the majority of pastors surveyed feel that the Church needs to look at how it handles issues of science. 72% of pastors with YEC views and 73% of pastors with TE views agree with the statement that <em>“the Christian community needs to take a serious look at its understanding of science and human origins in order to maintain its witness in the world.”&nbsp;</em>(The numbers are slightly lower for pastors who hold to Progressive Creation and who are uncertain).</p>

<p>Similarly, 66% of YEC pastors and 61% of both TE and Progressive Creation pastors agree that <em>“younger adults today are more concerned than ever about whether faith and science are compatible.”</em></p>

<h3>#3: Clergy think disagreements on science and faith harm our witness (but for different reasons).</h3>

<p>Clergy across all three viewpoints feel that disagreements are harming the Church’s outreach, but they differ in how they view that harm.</p>

<p>YEC pastors overwhelming agreed (85%) that <em>“Christian disagreement on matters of creation and evolution is compromising our witness to the world.”</em> However, a majority of TE pastors disagreed with the statement (63%).</p>

<p>Conversely, a majority of TE pastors (63%) agreed that <em>“The church’s posture toward science prevents many non-Christians from accepting Christianity,”</em>&nbsp;while a majority of YEC and Progressive Creation leaning pastors disagreed (59%).</p>

<h3>#4: Pastors aren’t avoiding science.</h3>

<p>The majority of pastors think that addressing issues of science for their congregations is an important part of their work. Of those surveyed, 72% felt that addressing science issues in the local community was somewhat (51%) or very (21%) urgent. When asked about science on a national and global level, even more pastors felt that addressing science issues is important (43% somewhat and 46% very). Furthermore, 79% of pastors included scientific themes in at least one sermon in the past year, and 40% had included them in at least ten sermons.</p>

<p>The majority of clergy across all four viewpoints also agreed with the statement <em>“Just as scripture should influence human interpretation of science, science should also inform our understanding of scripture.”</em> The numbers were highest for TE pastors and those who are uncertain (81% and 72%, respectively), though over half of YEC and PC pastors also agreed (52% and 65%, respectively).</p>

<p>Finally, although YEC’s are more reluctant than other pastors to say “science should inform understanding of scripture, they strongly agree (84%) that <em>“The Christian community needs a greater commitment to showing how young earth creationism is consistent with science.”</em></p>

<h3>#5: However, they are concerned about evolution for biblical reasons.</h3>

<p>Over half of pastors said they had “major concerns” about the idea that God used evolution. The main reasons for that concern were that the idea “undermines the authority of Scripture” (64%), “views portions of the Bible as non-literal, like Genesis” (62%), “raises doubts about a historical Adam and Eve” (61%), and “raises questions about how and when death and sin entered the world” (59%). However, 26% of pastors saw no concern with the idea that God used evolution.</p>

<h3>#6: The majority of clergy accept parts of scripture as symbolic.</h3>

<p>60% of the pastors surveyed felt that “some portions of the Bible are symbolic, but all that it teaches is authoritative.” Clergy whose views fall under theistic evolution and progressive creation were more likely to accept this statement (79% and 73% respectively), but a sizeable number of YEC pastors (40% among the core followers and 49% among those leaning towards YEC) also agreed with the statement.</p>

<h3>#7: Clergy are concerned that changing their views on origins might compromise their ministry.</h3>

<p>Over half of pastors (58%) who fell under the YEC category agreed that <em>“If you publicly admitted your own doubts about human origins, you feel you would have a lot to lose in your ministry.”</em> 41% of pastors in the Progressive Creation group also agreed with the statement. Pastors who were uncertain or who fell under the Theistic Evolution group were less concerned, with only 26% and 17% respectively agreeing with the statement.</p>
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        <pubDate>Wed, 08 May 13 08:00:35 -0700</pubDate>
        <dc:creator></dc:creator>
        <!--<dc:date>May 08, 2013 08:00</dc:date>-->
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        <title>Evolution Basics: Darwin’s Early Observations on Biogeography</title>
        <link>http://biologos.org/blog/evolution&#45;basics&#45;darwins&#45;early&#45;observations&#45;on&#45;biogeography?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/evolution&#45;basics&#45;darwins&#45;early&#45;observations&#45;on&#45;biogeography?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>For Darwin, both of these observations (that oceanic islands lacked terrestrial mammals, and that endemic species on islands were most similar to a species on the closest mainland) had the same explanation: his hypothesis that endemic, oceanic species were the modified descendants of a colonizing species from the nearest continent.</description>
        <content:encoded><![CDATA[<p>In the previous post in this series, we discussed how scientific theories—broad, well-tested explanatory frameworks—get their start as hypotheses. As a hypothesis is used to make predictions, and those predictions are supported by experimentation, over time, scientists come to have more and more confidence in that hypothesis as a reliable guide for making predictions about the natural world. This means any current theory in science has gone through this transition, and its history can be traced.</p>

<p>Like any theory, Darwin’s idea that evolution proceeds through natural selection was once merely a hypothesis. In this post, we’ll look at some of the early observations Darwin made on <em>biogeography</em>: the study of where species are distributed across the globe. These lines of evidence would later prod him to consider the possibility that species arise through a natural process of gradual change over time, rather than being independently created in each location where they are found.</p>

<h3>The curious case of the missing mammals</h3>

<p><as a="" href="http://en.wikipedia.org/wiki/Second_voyage_of_HMS_Beagle" naturalist="" on="" the="" widely-travelled="">As a widely-travelled naturalist on the&nbsp;<a href="http://en.wikipedia.org/wiki/Second_voyage_of_HMS_Beagle">HMS <em>Beagle</em></a>,&nbsp;Darwin studied a large number of different environments and documented the species he found in each. <em>The Beagle</em>, engaged as it was in an effort to map the coastline of South America, naturally paid call to numerous island groups along the way, including islands at a great distance from a continent (i.e.<a href="http://en.wikipedia.org/wiki/Island#Oceanic_islands"><em>oceanic</em></a>&nbsp;islands). One observation that Darwin made about oceanic islands is that none that he studied had terrestrial mammals on them. Later work, after his voyage, would confirm that this was a general rule. Oceanic islands lack terrestrial mammal species, except for small species that were introduced by humans. In contrast, flying mammals (i.e. bats) were found on oceanic islands, and often these species were endemic (i.e. found nowhere else in the world but the island in question).</as></p>

<p>Darwin found these observations difficult to square with his (then) working assumption that species were independently created in (and specifically created <em>for</em>) the locations in which they are found across the globe. He discusses these observations, and the questions they raised in his mind, in two chapters entitled “Geographical Distribution” in his <a href="http://darwin-online.org.uk/content/frameset?pageseq=364&amp;itemID=F373&amp;viewtype=text"><em>Origin of Species</em></a>. After discussing the similar case that amphibians (such as frogs, newts, and so on) are also not to be found on oceanic islands, he turns his attention to the <a href="http://darwin-online.org.uk/content/frameset?pageseq=411&amp;itemID=F373&amp;viewtype=side">missing mammals</a>:</p>

<blockquote><p>Mammals offer another and similar case. I have carefully searched the oldest voyages, but have not finished my search; as yet I have not found a single instance, free from doubt, of a terrestrial mammal (excluding domesticated animals kept by the natives) inhabiting an island situated above 300 miles from a continent or great continental island.... It cannot be said, on the ordinary view of creation, that there has not been time for the creation of mammals; many volcanic islands are sufficiently ancient, as shown by the stupendous degradation which they have suffered and by their tertiary strata: there has also been time for the production of endemic species belonging to other classes; and on continents it is thought that mammals appear and disappear at a quicker rate than other and lower animals. Though terrestrial mammals do not occur on oceanic islands, aërial mammals do occur on almost every island. New Zealand possesses two bats found nowhere else in the world: Norfolk Island, the Viti Archipelago, the Bonin Islands, the Caroline and Marianne Archipelagoes, and Mauritius, all possess their peculiar bats. Why, it may be asked, has the supposed creative force produced bats and no other mammals on remote islands? On my view this question can easily be answered; for no terrestrial mammal can be transported across a wide space of sea, but bats can fly across. Bats have been seen wandering by day far over the Atlantic Ocean; and two North American species either regularly or occasionally visit Bermuda, at the distance of 600 miles from the mainland. I hear from Mr. Tomes, who has specially studied this family, that many of the same species have enormous ranges, and are found on continents and on far distant islands. Hence we have only to suppose that such wandering species have been modified through natural selection in their new homes in relation to their new position, and we can understand the presence of endemic bats on islands, with the absence of all terrestrial mammals.</p>
</blockquote>

<p>(As an aside, it’s important to note that Darwin, when he discusses the “supposed creative force” is not here arguing against the existence of God as creator in general, but rather against the “ordinary view of creation” common at the time: that God had episodically created species at specific geographical locations (what were called “centers of creation”) and that biogeographical patterns could be explained with limited dispersal from those centers. <a href="http://en.wikipedia.org/wiki/Charles_Darwin#Religious_views">Darwin himself</a>&nbsp;held to this common view at the start of his voyage on the <em>Beagle</em>, and that is the model he is attempting to refute in <em>Origin</em>, since it was a prevailing view among scientists at the time. Darwin and many of his scientific contemporaries also had no difficulty viewing natural processes as part of God’s regular action in the world, as is evident in Darwin’s <a href="http://www.darwinproject.ac.uk/darwin-and-design-article">correspondence</a>&nbsp;with American botanist Asa Gray, among others.)</p>

<p>So, for Darwin, his biogeographical observations sat at ease with his (later) ideas of colonization and subsequent species change through natural selection, but made no sense to him if one held to an independent creation model. Many oceanic islands were very old, yet no mammals had been created there. Many oceanic islands had habitat suitable for mammals (or, indeed, for amphibians, as he notes)&nbsp;yet no such species had been created for that suitable habitat.</p>

<h3>Island endemics and their continental “allied species”</h3>

<p>Darwin noticed more than the <em>absence</em> of certain species groups on oceanic islands. He also noticed an interesting feature of the species that were present: an endemic species on an oceanic island would often have strong similarities with a species on the mainland closest to the island in question. Additionally, the pairing of oceanic endemic species with continental species often seemed to override expectations that species found in similar environments would be more similar to each other. These observations prompted him to reflect further on the possible means by which these “closely allied species” arose. As Darwin would write in his <em>Origin</em> this repeated pattern made a significant impression on him, and further caused him to doubt that endemic species had been individually created for each oceanic island. His visit to the Galapagos would <a href="http://darwin-online.org.uk/content/frameset?pageseq=415&amp;itemID=F373&amp;viewtype=text">prove instrumental on this point</a>:</p>

<blockquote><p>The most striking and important fact for us in regard to the inhabitants of islands, is their affinity to those of the nearest mainland, without being actually the same species. Numerous instances could be given of this fact. I will give only one, that of the Galapagos Archipelago, situated under the equator, between 500 and 600 miles from the shores of South America. Here almost every product of the land and water bears the unmistakeable stamp of the American continent. There are twenty-six land birds, and twenty-five of these are ranked by Mr. Gould as distinct species, supposed to have been created here; yet the close affinity of most of these birds to American species in every character, in their habits, gestures, and tones of voice, was manifest. So it is with the other animals, and with nearly all the plants, as shown by Dr. Hooker in his admirable memoir on the Flora of this archipelago. The naturalist, looking at the inhabitants of these volcanic islands in the Pacific, distant several hundred miles from the continent, yet feels that he is standing on American land. Why should this be so? why should the species which are supposed to have been created in the Galapagos Archipelago, and nowhere else, bear so plain a stamp of affinity to those created in America? There is nothing in the conditions of life, in the geological nature of the islands, in their height or climate, or in the proportions in which the several classes are associated together, which resembles closely the conditions of the South American coast: in fact there is a considerable dissimilarity in all these respects. On the other hand, there is a considerable degree of resemblance in the volcanic nature of the soil, in climate, height, and size of the islands, between the Galapagos and Cape de Verde Archipelagos: but what an entire and absolute difference in their inhabitants! The inhabitants of the Cape de Verde Islands are related to those of Africa, like those of the Galapagos to America. I believe this grand fact can receive no sort of explanation on the ordinary view of independent creation; whereas on the view here maintained, it is obvious that the Galapagos Islands would be likely to receive colonists, whether by occasional means of transport or by formerly continuous land, from America; and the Cape de Verde Islands from Africa; and that such colonists would be liable to modification;—the principle of inheritance still betraying their original birthplace.</p>

<p>Many analogous facts could be given: indeed it is an almost universal rule that the endemic productions of islands are related to those of the nearest continent, or of other near islands.</p>
</blockquote>

<h3>Rethinking independent creation</h3>

<p>For Darwin, both of these observations (that oceanic islands lacked terrestrial mammals, and that endemic species on islands were most similar to a species on the closest mainland) had the same explanation: his hypothesis that endemic, oceanic species were the modified descendants of a colonizing species from the nearest continent. This also explained the lack of amphibians and terrestrial mammals (but allowed for bats) - simply based on the ability of these classes of life to disperse across large expanses of ocean. Those that could disperse and colonize oceanic islands would experience modification in the new environment, and species unable to colonize these islands would never appear. To Darwin’s thinking, this explanation was wholly more satisfactory than the assumption that God had independently created every endemic species in its place, and arbitrarily chosen that oceanic islands did not need terrestrial mammals and amphibians.</p>

<p>Despite Darwin’s musing on the biogeographical patterns he observed, and the strong suggestion these patterns made of species change over time, a mechanism for that change would take some time for him to imagine. In our next post, we’ll look at that mechanism: Darwin’s idea of natural selection, and the evidence he assembled in its support prior to publishing the <em>Origin</em>.</p>
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        <pubDate>Thu, 07 Mar 13 07:56:26 -0800</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
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        <title>Denis Alexander on Understanding Creation Theology</title>
        <link>http://biologos.org/blog/denis&#45;alexander&#45;on&#45;the&#45;barriers&#45;to&#45;traditional&#45;creation&#45;theology?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/denis&#45;alexander&#45;on&#45;the&#45;barriers&#45;to&#45;traditional&#45;creation&#45;theology?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this video Conversation, Denis Alexander asserts that contemporary Christians are not taking the early chapters of Genesis seriously enough.</description>
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<p>In this video Conversation, Denis Alexander addresses two prominent barriers for Christians to accept evolutionary creation. The first is Biblical interpretation. When contemporary Christians interpret the early chapters of Genesis literally, they do so out of a desire to take the text seriously. Yet the early church fathers saw these chapters as figurative—and that figurative interpretation did not lesson the important foundational truths taught in these passages. The contemporary literal reading is actually a modern approach to the text in that our scientific mindset inappropriately shapes the interpretation. Since science did not even exist at the time that Genesis was written, an overly literal interpretation can actually cause us to miss the inspired message that the Biblical authors were communicating.</p>

<p><span style="line-height: 1.3em;">The second barrier is the rhetoric of the New Atheists, who claim that it is impossible to accept evolution while still believing in God. Christians should challenge this. Traditional Christian views are not in conflict with modern science. Instead, they see nature as God's work, with St. Augustine writing that "nature is what God does." As humanity develops a scientific understanding of nature, we will only learn more about the handiwork of God.&nbsp;</span></p>
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        <pubDate>Fri, 15 Feb 13 07:00:14 -0800</pubDate>
        <dc:creator>Denis Alexander</dc:creator>
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        <title>Evolution and Christian Faith Grantees Announced</title>
        <link>http://biologos.org/blog/evolution&#45;and&#45;christian&#45;faith&#45;grantees&#45;announced?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/evolution&#45;and&#45;christian&#45;faith&#45;grantees&#45;announced?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Congratulations to the 37 winners of the Evolution &amp; Christian Faith (ECF) grants competition! ECF is a new BioLogos program designed to support projects and network&#45;building among scholars, church leaders, and parachurch organizations.</description>
        <content:encoded><![CDATA[<p>Congratulations to the 37 winners of the Evolution &amp; Christian Faith (ECF) grants competition!&nbsp; ECF is a new BioLogos program designed to support projects and network-building among scholars, church leaders, and parachurch organizations. Each project takes a different approach to address theological and philosophical questions commonly voiced by Christians about evolutionary creation. ECF places a premium on scholarship with high “translational” potential—that which leaves the academy and makes an impact on the church. The program runs through August 2015.</p>

<p>Grantees will benefit from in-person interaction through a series of summer workshops in 2013, 2014, and 2015. These meetings will not only foster a broader knowledge base, but will build a sustained network of scholars and church leaders, both young and seasoned, who are serious about addressing the concerns of the church about evolution. Also in 2015, in connection with the third summer workshop, BioLogos will host a large conference open to scientists, scholars, and church leaders from around the world.</p>

<h3>ECF History</h3>

<p>In January 2012, BioLogos was awarded a multi-million dollar grant from the John Templeton Foundation to fund the work of scholars and church leaders on evolution and Christian faith. In spring 2012 we worked hard to get the word out. You may have seen announcements on the BioLogos website, in our newsletters, on the Books &amp; Culture, Leadership Journal, or First Things websites, on your professional society’s listserv, or perhaps on your friend’s blog.</p>

<p>The response was overwhelming: we received 225 letters of intent for a total request of $21 million—about seven times the amount we had to offer. We needed to invite the most promising applicants to submit a full proposal, but recognizing the projects with highest potential would require broad expertise. From the beginning, we envisioned that a panel of scientists, pastors, and scholars would oversee the application and review process as well as play key advisory roles throughout the project. A team of eight highly qualified individuals came on board in the early months of the project. They reviewed each proposal and together recommended that BioLogos invite 86 applicants to submit full applications.</p>

<p>The deadline for submissions was October 1, 2012. As in the previous round, the ECF panel evaluated each proposal. In addition, we asked 55 other experts to participate, so that each proposal received 3-4 scores. Criteria for the decision included significance of topic, project design, creativity and innovation, long-term impact potential, feasibility, and budget.</p>

<p>The panel then met together November 29-30, 2012, to make the final funding decisions. In the end, they recommended that BioLogos give 37 awards, ranging from $23,000 to $300,000. BioLogos staff notified applicants of their awards on December 14, 2013.</p>

<h3>The Grantees</h3>

<p>As part of our objective to create a network of scholars and leaders, we awarded grants to organizations across the U.S. and the world. Thirty of the 37 grantees are domestic; seven are international, hailing from Canada, France, Great Britain, Netherlands, and Spain.</p>

<p>Two-thirds of the accepted projects will be led by teams—some with three or more Project Leaders. We expect that the teamwork and time spent together at our summer workshops will be the start of a long-lasting network of people dedicated to helping the church think carefully about origins.</p>

<p>Applicants chose to apply under one of three program tracks: interdisciplinary scholarship (Track 1), intra-disciplinary scholarship (Track 2), and translational projects (Track 3). Track 1 projects focus on both the collaboration between individuals in different disciplines and the development of projects at the interface of different content areas. Track 2 projects focus on work done within a specific discipline. Track 3 focuses on projects that encourage Christians, especially those within more conservative traditions, to engage in meaningful and productive dialogue to reduce tensions between mainstream science and the Christian faith. The numbers of grantees in Tracks 1, 2, and 3 are 6, 8, and 23, respectively.</p>

<p>Many of the scholarly projects tackle questions about Adam and Eve, the Fall, human identity, and Original Sin—some of the most critical interpretive issues for evangelical theology.&nbsp; Some examples:&nbsp;</p>

<ul>
<li><p>Theologian Oliver Crisp of Fuller Seminary will take an analytic theology approach to ask to what extent a theological account of the origin of human sin depends upon the evolution of modern humans from one and only one ancestral pair—especially if that pair does not appear to correspond to what we would think of as modern human beings.&nbsp;</p>
</li>
<li><p>Pastor Michael Gulker and philosopher James Smith, leading a large team from The Colossian Forum, ask a related question: if humanity emerged from non-human primates—as genetic, biological, and archaeological evidence seems to suggest—then what are the implications for Christian theology’s traditional account of origins, including both the origin of humanity and the origin of sin?&nbsp;</p>
</li>
<li><p>Biologist Dennis Venema of Trinity Western University and New Testament scholar Scot McKnight of Northern Seminary will write a book on the evidence for evolution and population genetics, with informed theological reflection on how these issues interact with orthodox Christianity.</p>
</li>
<li><p>Biologist David Wilcox of Eastern University will develop an updated model of human identity which reflects the complex recent scientific advances in genetics and paleoanthropology and yet is sensitive to theological concerns.&nbsp;&nbsp;</p>
</li>
</ul>

<p>These are just a few of the scholarly awards; check out the <a href="/ecf/grantees">Grantees page</a> for full descriptions of all Track 1 and Track 2 projects.</p>

<p>All projects have translational potential, but Track 3 projects are designed to meet the needs of a particular constituency within the evangelical church. These projects run the gamut from ethics to education to media production to ministry resources. &nbsp;Some examples include:</p>

<ul>
<li><p>Theologian Lee Camp of Lipscomb University will produce “The Questions in Monkey Town,” an episode of Tokens, a live variety show that features musical performances, comedic sketches, brief interpretive monologues, and dialog with authors and scholars. The episode will be performed and filmed on the site of the famous Scopes Trial in Dayton, Tennessee.</p>
</li>
<li><p>Chaplain Joshua Hayashi and Educator Diane Sweeney of the Punahou School in Hawaii will lead a team to produce multimedia curricula aimed at helping high school students connect with their biology curricula and, at the same time, deepen their Christian faith.</p>
</li>
<li><p>Physics teacher and pastor Benoît Hébert of Science et Foi Chrétienne in France will lead an international, multi-denominational team of French speaking Evangelical scientists, pastors and church leaders to produce a large number of resources on evolutionary creation.</p>
</li>
<li><p>Pastor Seung-Hwan Kim of Grace Truth Community Church, a Southern Baptist church in Cambridge, Massachusetts, will produce teaching and preaching materials about evolution for church leaders.</p>
</li>
<li><p>President Gregory Wolfe and Director of Resource Development for IMAGE will gather artists and writers of faith whose work explores the dialogue between evolutionary science and faith practice, convening a conversation between them and scientists, theologians, and church leaders in private and public conferences.</p>
</li>
</ul>

<p>Again, this is just a taste of the diversity of Track 3 projects. Read more about each project on the <a href="/ecf/grantees">Grantees page</a>. You can look forward to an incredible variety of resources coming out of the ECF program, many of which will be featured right here on the BioLogos Forum.</p>
]]></content:encoded>
        <pubDate>Wed, 13 Feb 13 05:25:03 -0800</pubDate>
        <dc:creator>Kathryn Applegate</dc:creator>
        <!--<dc:date>Feb 13, 2013 05:25</dc:date>-->
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        <title>Where are the Transitional Fossils?</title>
        <link>http://biologos.org/blog/where&#45;are&#45;the&#45;transitional&#45;fossils?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/where&#45;are&#45;the&#45;transitional&#45;fossils?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>A common argument leveled against the theory of evolution is that scientists have not been able to produce transitional fossils that show the change of one species into another.  In this podcast, we address a common misconception about what transitional fossils actually are.</description>
        <content:encoded><![CDATA[<p align="center"><iframe src="http://player.vimeo.com/video/31875051?title=0&amp;byline=0&amp;portrait=0" width="570" height="428" frameborder="0" webkitAllowFullScreen allowFullScreen></iframe></p>

<p>A common argument leveled against the theory of evolution is that scientists have not been able to produce the expected transitional fossils that show the change of one species into another. If evolution were true, wouldn’t there be instances of clear intermediary species, like, for example, a species that was half whale and half hippo to show the transition between those two? In this BioLogos podcast, Kelsey Luoma addresses this misconception about what a transitional fossil actually is. Rather than a mix between two related species, transitional fossils point back to the common ancestors that modern species share. The fact is that the number of transitional species is massive and it grows with each passing year.  Given the rarity with which organisms are actually fossilized, the amazing thing is actually the completeness of the fossil record, not its incompleteness.  The transitional species story strongly supports, and certainly does not disprove, evolutionary theory. <sup>1</sup></p>

<p class="date">1. To hear the full audio clips which have been referenced go to:</p>
<ul><li><a href="http://www.youtube.com/watch?v=X6EmOQLf25s&feature=BFa&list=PLACF41F3DDBCA4565&lf=results_video&noredirect=1" target="_blank">Rational Response Debate with Kirk Cameron (from Way of the Masters)</a></li>
<li><a href="http://www.youtube.com/watch?v=FN9wyn9xVko&feature=related" target="_blank">Behind the Scenes with Dr. Neil Shubin (from Cincinnati Museum Center)</a></li>
<li><a href="http://www.youtube.com/watch?v=fVNXXLLUYFM' target="_blank">Mark Norell Publishes New Archaeopteryx Findings (from American Museum of Natural Sciences)</a></li>
<li><a href="http://www.youtube.com/watch?v=VmtDGjfMajM" target="_blank">Texas A&M Professor Discusses Findings of Autralopithecus Sediba and its Relationship to Humans (from Texas A&M University)</a></li>
<li>Intro/outro music composed by Martin Minor (<a href="http://www.looperman.com/users/profile/159051" target="_blank">Minor2Go</a>).</li> </ul> </p>

<p><strong>An audio only version of the podcast can be downloaded <a href="http://biologos.org/uploads/resources/fossil_podcast_final.mp3" target="_blank">here</a>.</strong></p>
]]></content:encoded>
        <pubDate>Fri, 01 Feb 13 08:57:28 -0800</pubDate>
        <dc:creator>Kelsey Luoma</dc:creator>
        <!--<dc:date>Feb 01, 2013 08:57</dc:date>-->
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        <title>Surprised by Jack, Part 4: Mere Evolution</title>
        <link>http://biologos.org/blog/surprised&#45;by&#45;jack&#45;part&#45;4&#45;mere&#45;evolution?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/surprised&#45;by&#45;jack&#45;part&#45;4&#45;mere&#45;evolution?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In short, Lewis made it quite clear in his writings that he believed that there is no real conflict between mere evolution and mere Christianity.</description>
        <content:encoded><![CDATA[<h3>Mere Evolution: Lewis on Evolutionary Science versus the Myth of Evolutionism </h3>

<p>For many American evangelicals it will come as a surprise to realize just how little Lewis thought was at stake in the scientific question of our biological origins.  As we have seen, Lewis had no objection to the notion that “man is physically descended from animals.”  Four years after admitting to being shaken by some of the writings from Bernard Acworth’s Evolution Protest Movement, Lewis could still write in a private letter, “I don’t mind whether God made man out of earth or whether ‘earth’ merely means ‘previous millennia of ancestral organisms.’  If the fossils make it probable that man’s physical ancestor’s ‘evolved,’ no matter.”<sup>1</sup> So far as we can tell, Lewis never took the view that belief in mere Evolution, “Evolution in the strict sense,”<sup>2</sup> “the Evolution of real biologists,” which he took to be “a genuine scientific hypothesis” and “a purely biological theorem”<sup>3</sup> was necessarily at odds with a belief in mere Christianity.  </p>

<p>Indeed, the final chapter of his classic book <em>Mere Christianity</em>, “The New Men,” assumes an evolutionary picture of life’s origins and development throughout.<sup>4</sup> He writes, </p>

<blockquote>Perhaps a modern man can understand the Christian idea best if he takes it in connection with Evolution.  Everyone knows about Evolution…: everyone has been told that man has evolved from lower types of life.<sup>5</sup></blockquote>

<p>While Lewis acknowledges that “some educated people disbelieve [the theory of Evolution],” he gives no hint throughout the rest of the chapter that he is one of their number.<sup>6</sup> In fact, throughout the rest of the chapter he seems to simply assume a broadly evolutionary picture of natural history (as he does in <em>The Problem of Pain</em> and elsewhere).  So, for instance, he writes:</p>

<blockquote>Thousands of centuries ago  huge, very heavily armoured creatures <strong>were evolved.</strong><sup>7</sup><br /><br />
At the earlier stages living organisms have had either no choice or very little choice about taking the new step [of development].  Progress was, in the main, something that happened to them, not something that they did.<br /><br />
<strong>Century by century God has guided nature up to the point of producing creatures</strong> (humans) which can (if they will) be taken right out of nature, turned into “gods.”<sup>9</sup></blockquote>

<p>And he says much more in that vein.  While it may be possible to read Lewis as invoking Evolution for purely illustrative purposes without actually believing in it, such a reading seems less than likely given his statements in this chapter and elsewhere.  In fact, Lewis offers no hint anywhere in his public writings that he regards evolutionary theory as either untrue or conflicting with mere Christianity.</p>

<p>What Lewis did believe to conflict with Christian faith was what he called the great “Myth” of “Evolutionism” or “Developmentalism.”    But this is not the same as evolutionary theory per se.  “[We] must sharply distinguish between Evolution as a biological theorem and popular Evolutionism or Developmentalism which is certainly a Myth,” he writes in his essay “The Funeral of a Great Myth.”<sup>11</sup> Lewis believed that the great myth of “Evolutionism” conflicted not only with the Christian faith, but with Reason itself, undercutting the grounds for believing in human rationality and, therefore, in any human rationale that could be offered for believing in Evolutionism in the first place.   According to Lewis,Evolutionism’s chief premise, namely, Naturalism, invalidates human reasoning itself, amounting to “an argument which proved that no argument was sound—a proof that there are no such things as proofs—which is nonsense.”<sup>12</sup> “All possible knowledge…depends on reasoning,” he writes in chapter III of <em>Miracles</em>.<sup>13</sup> “We infer Evolution from fossils: we infer the existence of our own brains from what we find inside the skulls of other creatures like ourselves in the dissecting room.”  All sciences, including evolutionary science, depend upon the validity of human inference for their own validity.  “Unless human reasoning is valid no science can be true.”<sup>14</sup> Naturalism, however, with its grand Myth of Evolutionism explains all of reality, including human reason, in terms of non-rational natural causes and effects, reducing all human reasoning to being no more than the accidental byproducts of chance, matter and time, and thereby undercutting the validity of reasoning itself.    </p>

<p>However, if one allows, as Lewis apparently did, that God guided the evolution of humanity so as to make us reasonable creatures, then humanity’s descent from the animals in no way undermines the validity of human reasoning.  By maintaining the distinction between Evolution as a scientific theory and Evolutionism as a popular Myth it becomes possible for one to be a full-blooded theistic evolutionist with both a robust belief in God and a robust belief in evolution.  The distinction frees Christians to accept evolutionary science without knuckling under to reductionistic Scientism.  Thus, in the very essay where Lewis most acerbically attacks Evolutionism, “The Funeral of a Great Myth,” Lewis also clearly allows for a form of theistic evolution.  Lewis writes: </p>

<blockquote><em>I am not in the least denying that organisms on this planet may have ‘evolved.’</em>  But if we are to be guided by the analogy of Nature as we know her, it would be reasonable to suppose that this evolutionary process was the second half of a long pattern—that the crude beginnings of life on this planet have themselves been ‘dropped’ there by a full and perfect life.<sup>15</sup></blockquote>

<p>As Lewis makes clear in another piece, “Two Lectures,” the “full and perfect life” by which “this evolutionary process” was “dropped” exists outside of Nature, which is to say, exists outside of the purview of the natural sciences.  “Is it not…reasonable to look <em>outside</em> Nature for the real Originator of the natural order?” he asks.<sup>16</sup></p>

<p>Lewis, however, was no Deist.  He clearly did not believe that the “crude beginnings of life” were simply “dropped” by God so that the “evolutionary process” would do what it would.  Lewis seems to have thought that God at least superintended the evolution of humankind, particularly humanity’s cognitive capacities, in a rather hands-on manner:</p>

<blockquote> <strong>For long centuries God perfected the animal form which was to become the vehicle of humanity and the image of Himself.</strong>  He gave it hands whose thumb could be applied to each of the fingers, and jaws and teeth and throat capable of articulation, and a brain sufficiently complex to execute all the material motions whereby rational thought is incarnated.  <strong>The creature may have existed for ages in this state before it became man</strong>: it may even have been clever enough to make things which a modern archaeologist would accept as proof of its humanity.  But it was only an animal because all its physical and psychical processes were directed to purely material and natural ends.  Then, in the fullness of time, <strong>God caused to descend upon this organism</strong>, both on its psychology and physiology, <strong>a new kind of consciousness</strong> which could say “I” and “me,” which could look upon itself as an object, which knew God, which could make judgments of truth, beauty, and goodness, and which was so far above time that it could perceive time flowing past.<sup>17</sup></blockquote>

<p>Whether this picture of hands-on divine guidance is friendlier towards present day Intelligent Design theory or towards theistic evolution, <em>a la</em> BioLogos, will be a matter for debate.  Lewis does not draw the distinctions that are customary in contemporary debates surrounding evolution—macro- versus micro-evolution, Evolution <em>qua</em> mere common descent versus Evolution <em>qua</em> wholly unguided, random process, and so on—making it difficult to say with certainty what he would say if he were here today. It seems likely, however, that Lewis would not have expected the <em>natural</em> sciences to be able to detect God’s <em>supernatural</em> guidance of man’s evolutionary path any more than he expected the modern archaeologist to be able detect the moment when our ancestors crossed the threshold from beast to man, and that likelihood might count as a strike against the ID movement’s claim on Lewis.  In any case, Lewis plainly outlines a view that is quite compatible with the standard evolutionary picture of common descent and that hardly amounts to Scientistic reductionism.  In short, Lewis made it quite clear in his writings that he believed that there is no real conflict between mere evolution and mere Christianity.</p>

<h3>Surprised by Jack</h3>
<p>Whatever Lewis may have believed in private, as a spokesperson for the faith, Lewis consistently allowed that mere Christianity was compatible with mere evolutionary science, and he even took the trouble to articulate his understanding of the Fall in such a way as to harmonize it with his belief in human evolution. While some recent writers have attempted to wield Lewis as weapon in intra-Evangelical debates around Evolution, to wield a thinker is, as Martin Buber says, to treat that thinker as an ‘It’ rather than as a ‘Thou,’ to treat him as an object to be used rather than as person with the right and capacity to defy our expectations.<sup>18</sup> We evangelicals have become so accustomed to inserting quotable quotes from Lewis’s corpus into our sermons, books, power-point presentations, Facebook walls, and Twitter feeds that we drowsily pass over the surprising elements of his thought—the elements not easily reconciled with our clean-cut theological shibboleths—without even noticing.   This is an intellectual habit ripe to be broken, and it is high time we allowed the real Jack to shatter the cultural icon—indeed, the <em>mirror</em>—we have made out of him.  At this watershed moment in the history of the Church, when so much seems to threaten to upend the faith once delivered—whether scientific or archaeological discoveries, cultural trends, or newfangled philosophies—there is doubtless much that the greatest modern exponent of mere Christianity can teach us to help us navigate these troubled times.  But it is only by opening ourselves to being surprised by Jack that we will be capable of actually learning something from him. </p>

<h3>Notes</h3>
<p class="date">1. C.S. Lewis to Joseph Cranfield, Feb. 28, 1955, unpublished letter, Wade Center Collection, Wheaton College, as cited in West, “Darwin in the Dock,” 113<br />
2. Lewis, “Is Theology Poetry?,” in <em>The Weight of Glory</em>, 137<br />
3. Lewis, “The Funeral of a Great Myth,” 85, 86<br />
4. Lewis, <em>Mere Christianity</em>, 185-91<br />
5. Ibid, 185<br />
6. Ibid<br />
7. Ibid, 186<br />
8. Ibid, 187<br />
9. Ibid, 188, my italics<br />
10. Ibid<br />
11. Ibid<br />
12. Ibid, 24<br />
13. Lewis, <em>Miracles</em>, 23<br />
14. Ibid<br />
15. Lewis, “The Funeral of a Great Myth,” in <em>Christian Reflections</em>, 91<br />
16. Lewis, “Two Lectures,” in <em>God in the Dock</em>, <br />
17. Lewis, <em>The Problem of Pain</em>, 68<br />
18. Buber, <em>I and Thou</em>, (New York: Simon & Schuster, 1996)</p>
]]></content:encoded>
        <pubDate>Thu, 13 Dec 12 04:00:31 -0800</pubDate>
        <dc:creator>David Williams</dc:creator>
        <!--<dc:date>Dec 13, 2012 04:00</dc:date>-->
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        <title>Series: Genesis Through Ancient Eyes</title>
        <link>http://biologos.org/blog/series/genesis&#45;through&#45;ancient&#45;eyes?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/genesis&#45;through&#45;ancient&#45;eyes?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this talk, originally delivered at the BioLogos President&apos;s Circle meeting in October 2012, Dr. John Walton discusses the origin stories of Genesis 1&#45;3, and why their focus on function and archetypes mean there is no Biblical narrative of material origins.</description>
        <content:encoded><![CDATA[<p>In the first segment of his talk, “Genesis Through Ancient Eyes”, Dr. John Walton discusses the authority of Scripture and how we should both honor and understand the text. According to Walton, we must remember that Scripture is “for us”, but that it was not written “to us”. He briefly highlights the ancient cosmology of both Egypt and Isreal and implores us to see the text of the Bible the way the Ancient Israelites would have seen it.</p>]]></content:encoded>
        <pubDate>Thu, 18 Oct 12 08:00:48 -0700</pubDate>
        <dc:creator>John Walton</dc:creator>
        <!--<dc:date>Oct 18, 2012 08:00</dc:date>-->
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        <title>Series: Decoding ENCODE</title>
        <link>http://biologos.org/blog/series/decoding&#45;encode&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/decoding&#45;encode&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The BioLogos Foundation explains to the findings of the Encyclopedia of DNA Elements (ENCODE) project and responds to the claims that its discoveries challenge the theory of evolution, especially regarding so&#45;called &quot;junk DNA&quot;.</description>
        <content:encoded><![CDATA[<p>In 2003, under the leadership of BioLogos founder Francis Collins, the Human Genome Project sequenced the full human genome, showing us for the first time the order of the 3.2 billion chemical “bases” that make up the rungs of DNA’s double helix structure. The project identified and mapped 23,000 genes that code for proteins, but those genes make up less than 2% of the total sequence—far fewer than originally predicted, given the complexity of humans. While many non-coding sequences were identified as having function as well, there were still vast swaths of the genome that had no obvious function. In fact, what was known about certain classes of sequences suggested that they had no functional role for humans—such as the sequences identified as either transposons or transposon fragments that make up nearly half of our genome. These sorts of sequences seemed to fit into what was popularly known as the “junk DNA” category. </p>

<p>With the complete genome sequence in hand, we knew the sequence and location of our genes, but what we didn’t know was how all those genes are regulated: how do the trillions of cells in our bodies know when to turn on or off all those genes?  How do the hundreds of distinct cell types develop and function together, when they are all running on the same DNA “operating system?”  </p>
<p>That’s where the ENCODE (short for Encyclopedia of DNA Elements) project comes in. Launched in September 2003, shortly after the announced completion of the Human Genome Project, the goal of the ENCODE project is “to build a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active.” In other words, the project seeks to understand how the genome “works.”</p>

<p>Early this month, researchers from ENCODE released more than thirty papers presenting their findings. During a <em>Science</em> magazine <a href="http://news.sciencemag.org/sciencenow/2012/09/live-chat-figuring-out-what-dna.html">online chat</a>, the project’s data coordinator, Ewan Birney, explained the outcome:</p>

<blockquote>The ENCODE project aimed to start our understanding of how the human genome works. We know that (nearly) all the information that determines a human is in the genome, as we all start off as single cell with this DNA. However, we had a patchy understanding of how it works, in particular away from protein coding genes.<br /><br />

To work out how the genome works, we used the fact there are many tiny machines (proteins and RNA - RNA is very like DNA) in each of our cells which know how to "read" parts of the genome. By monitoring where these little molecular machines are on the genome, or how parts of the DNA are copied into RNA (there are quite a few different types of RNA as well), we start to gain some insight into the genome.<br /><br />

We did many such experiments, across different cell types (eg, one cell type was very similar to a liver cell type; another was very similar to a white blood cell). This way not only can we see what is similar, we can also see differences between these cell types.<br /><br />

There is a lot more to get to know and understand here - this is definitely closer to the start than the end. But it is a substantial amount of data, and analysis, to start on this journey.</blockquote>

<p>According to the abstract of one of the <a href="http://www.nature.com/nature/journal/v489/n7414/full/nature11247.html">lead papers</a> from <em>Nature</em>, this extraordinary glut of data “enabled us to assign biochemical functions for 80% of the genome, in particular outside of the well-studied protein-coding regions.”  Only 2% of the genome codes for proteins, but 80% or more has <em>some</em> biochemical function.  As a <em>Science</em> <a href="http://www.sciencemag.org/content/337/6099/1159">news article</a> put it, these 30 papers “sound the death knell for the idea that our DNA is mostly littered with useless bases.”</p>

<p>The pro-Intelligent Design organization The Discovery Institute has heralded the discovery as the “demise of junk DNA.”  Casey Luskin writes for their <a href="http://www.evolutionnews.org/2012/09/junk_no_more_en_1064001.html">blog</a> <em>Evolution News</em>:</p>

<blockquote>Let's simply observe that it provides a stunning vindication of the prediction of intelligent design that the genome will turn out to have mass functionality for so-called "junk" DNA. ENCODE researchers use words like "surprising" or "unprecedented." They talk about of how "human DNA is a lot more active than we expected." But under an intelligent design paradigm, none of this is surprising. In fact, it is exactly what ID predicted.</blockquote>

<p>The extent to which the ENCODE project been able to identify function has been surprising—even exhilarating—though scientists have for some time been getting glimpses of the many ways in which segments of DNA can be “active.”  Even in 1970 biologists knew that some non-coding DNA had function, and by 2003 there was a large body of work demonstrating that many non-coding elements acted as promoters, enhancers, insulators, and so on. Indeed, in recent years many have come to appreciate the fact that “junk” was never really an appropriate metaphor in the first place.   Still, because sequencing of multiple genomes has shed such extraordinary light on key evolutionary mechanisms, many geneticists have focused on function primarily in terms of which regions do or do not contribute to the evolutionary fitness of their host, rather than whether they were merely "doing something" biochemically.  What the impressive ENCODE project has done is open a treasure trove of new information that can only accelerate the pace at which researchers are able to explore the incredible subtlety and complexity of DNA, and refine the very concept of “functionality.” </p>

<p>So with all this in mind, is ENCODE a stunning victory for ID, as Luskin believes? Bryan College biologist Todd Wood thinks not.  He <a href="http://toddcwood.blogspot.co.uk/2012/09/everyones-excited-about-encode.html">writes</a>, “I don't think that function equates to design, nor do I think that design requires or predicts function.  They're not the same thing… my understanding of function does not require me to hypothesize God (or an anonymous designer, if you must) as the proximal cause.”  </p>

<p>We agree.  Indeed we would go on to say that evolution and design are not mutually exclusive.  So while finding function is not sufficient to prove design, recognizing that function has arisen by way of evolution does not indicate that God was not at work.  We at BioLogos believe God providentially works out his purposes—his designs—<em>through</em> the elegant processes of evolution, not in opposition to them.</p>

<p>Amazing as the new data are, it only strengthens and enhances our evidence for evolution.  While much of the genome is “doing something” biochemically, it is still likely that the majority of the sequence is evolutionarily neutral (Senior Fellow Dennis Venema discusses the evidence for this “neutrality” in a <a href="http://biologos.org/blog/understanding-evolution-is-there-junk-in-your-genome-part-1">post</a> on our site, including a striking comparison between 29 different mammal genomes and the human genome).  In fact, another  ENCODE researcher participating in the <em>Science</em> magazine chat, John A. Stamatoyannopoulos of the University of Washington School of Medicine, thinks the findings align beautifully with evolutionary theory:
</p>

<blockquote>ENCODE's data provide a unique and powerful window through which to view evolutionary change. We can see those changes directly by lining up the genome sequences of many different organisms -- these line-ups have revealed millions of regions where all the genomes agree, indicating sequences that have been specially preserved by evolution while others have decayed away (ie freely changed their letter codes). We now see that a large proportion of these 'conserved' regions are lighted up by ENCODE annotations, indicating that they are marking spots in the genome that contain important instructions for cell function.</blockquote>

<p>We’ve discussed “junk” DNA previously, including a multi-part series by Dennis Venema, and we’ve received many emails over the past few days asking for our comments on the ENCODE findings. On Monday and Tuesday, Dr. Venema will begin to offer his own thoughts on ENCODE.</p>

<p class="intro">A special thanks goes to Darrel Falk, Mark Sprinkle, Kathryn Applegate, Dennis Venema, and Tom Burnett for their contributions to this post.</p>]]></content:encoded>
        <pubDate>Wed, 26 Sep 12 05:00:35 -0700</pubDate>
        <dc:creator>Stephen Mapes, Dennis Venema</dc:creator>
        <!--<dc:date>Sep 26, 2012 05:00</dc:date>-->
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        <title>Denisovans, Humans and the Chromosome 2 Fusion</title>
        <link>http://biologos.org/blog/denisovans&#45;humans&#45;and&#45;the&#45;chromosome&#45;2&#45;fusion?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/denisovans&#45;humans&#45;and&#45;the&#45;chromosome&#45;2&#45;fusion?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The Denisovans, an extinct hominid group that interbred with modern humans, made the news again lately with the publication of a more detailed study of their genome. One of the many interesting findings was that the Denisovans share the same chromosome 2 fusion that modern humans have.</description>
        <content:encoded><![CDATA[<br> </br><p>The Denisovans, an extinct hominid group that interbred with modern humans, made the news again lately with the publication of a more detailed study of their genome. One of the many interesting findings was that the Denisovans share the same chromosome 2 fusion that modern humans have. In this post, I review what we know about the origins of human chromosome 2, and then discuss the new Denisovan findings and their implications. </p>

<h3>The origins of human chromosome 2: a brief review</h3>
<p>Though I have discussed the evidence for a fusion event leading to human chromosome 2 before, perhaps a brief review of the evidence is in order. The human genome is made up of 23 pairs of chromosomes (for a total of 46 chromosomes). This makes us something of an oddity among living great apes, all the rest of whom  have 24 pairs of chromosomes (for a total of 48). Given that there are many independent lines of evidence that support the conclusion that we share a common ancestor with other great apes, this poses something of a conundrum: how is it that our species arrived at this specific chromosome number? If we were to represent this “problem” on a phylogeny, or tree of relatedness, it would look something like this (not to scale):</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/denisovans_fig_1.jpg" alt="" height="357" width="434"  /></p>
 
<p>Our closest living relatives, chimpanzees and bonobos, both have 48 chromosomes, as do all other great apes such as gorillas and orangutans. This pattern has one of two explanations, one of which is much more likely than the other. Either the common ancestor to these species had 48 chromosomes, and there was an event that reduced that number to 46 specifically on the lineage leading to humans (option A), or the common ancestor species had 46 chromosomes, and there were independent, repeated events that increased chromosome number in all other great ape species (option B). We can compare these options by placing the required event(s) on the phylogeny (again, not to scale): </p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/denisovans_fig_2.jpg" alt="" height="300" width="570"  /></p>
 
<p>It should be obvious that the option that requires the fewest events is the more likely one – in this case option A with an event that reduces chromosome number in the lineage leading to humans. The other option, that of repeated, independent events to increase chromosome number, remains a formal, but unlikely, possibility. Events that reduce chromosome number are not frequent occurrences, so Option A is more likely than Option B.</p>

<p>We can also find further support for Option A, because it predicts a specific type of event, namely one that reduces chromosome number. Since <em>loss</em> of a large amount of chromosomal material is almost always detrimental, we need an event that reduces chromosome number without losing information. One way for this to happen is for two chromosomes to fuse together and become one. Initially, this event would produce an individual with 47 chromosomes, where two different chromosomes get stuck together. Contrary to what is often assumed, this individual would be fertile and able to interbreed with the others in his or her population (who continue to have 48 chromosomes). In a small population, over time, two relatives who both have one copy of the fusion chromosome may mate and produce some progeny with two copies of the fused chromosome, or the first individuals with 46 chromosomes. Since either a 48-pair set or a 46-pair set is preferable for ease of cell division, this population will either eventually get rid of the fusion variant (the most likely outcome), or by chance will switch over completely to the “new” form, with everyone bearing 46 chromosome pairs. While not overly likely, this type of event is not especially rare in mammals, and we have observed this sort of thing happening within recorded human history in other species.  Some mammalian species even maintain distinct populations in the wild with differing chromosome numbers due to fusions, and these populations retain the ability to interbreed. </p>

<p>Further evidence for a fusion event in the lineage leading to modern humans comes from comparing <em>synteny</em>, or gene locations and orders on chromosomes within modern great apes – an issue we have discussed <a href="http://biologos.org/blog/signature-in-the-synteny">here</a> before.  In brief, what we see in human chromosome 2 is exactly what we would predict for a fusion event. When compared to other great apes, we see the genes on human chromosome 2 match up, in order, with two smaller ape chromosomes. We also see that sequences used at the tips of chromosomes are present at the proposed fusion site, and that human chromosome 2 has not one but two sites for the cell cytoskeleton to attach to for cell division – but that one of the sites is mutated and not functional, though it lines up precisely with the location of this site on the appropriate ape chromosome. Together, this evidence consistently supports both common ancestry for humans and great apes, and specifically that the difference we see in our chromosome numbers arose due to a single fusion event. I briefly discussed this evidence in my <a href="http://biologos.org/blog/the-sorrows-and-joys-of-teaching-evolution">last post</a> where I describe how I teach some of this material and the compelling impact it has on students exploring the evolution question for the first time. </p>

<h3>Enter the Denisovans</h3>
<p>With that as background, we are now prepared to appreciate a new finding that comes from genomics work done on the Denisovan hominids, an archaic species that is more closely related to Neanderthals than to us, but that nonetheless interbred with some anatomically modern humans as they migrated out of Africa and populated the globe. (For those not familiar with the Denisovans, or the evidence for our interbreeding with them, both Darrel Falk and I have written on this previously, <a href="http://biologos.org/blog/a-geneticists-journey">here</a> and <a href="http://biologos.org/blog/understanding-evolution-neanderthals-denisovans-and-human-speciation">here</a>). Recently, a more detailed understanding of the Denisovan genome <a href="http://www.nature.com/news/new-dna-analysis-shows-ancient-humans-interbred-with-denisovans-1.11331">was published</a>, and nested in the new information is the discovery that the Denisovans share the 46 chromosome set with the same fusion that <a href="http://johnhawks.net/weblog/reviews/denisova/denisova-chromosome-2-2012.html">we have</a>. This strongly supports the hypothesis that the fusion event predates the separation of our species. If we were to represent this on a phylogeny, we can now place this event with more accuracy than before (as before, the phylogeny is not to scale): </p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/denisovans_fig_3.jpg" alt="" height="452" width="513"  /></p>
 
<p>Despite this new information, one obvious question remains. Did the Neanderthals also have the 46-pair set? From looking at the phylogeny above, we can see that the most likely answer is that they did, since the fact that the Denisovans had it strongly implies that the last common ancestor of humans and Neanderthals / Denisovans had it as well, and the Neanderthal-Denisovan split comes later. While the Denisovan DNA samples are of high enough quality to make this assessment, we do not yet have Neanderthal DNA of high enough quality to do the same analysis with current methods (though one additional feature of the new work on the Denisovan genome is developing more sensitive DNA sequencing techniques that may resolve this question in the future).</p>

<p>In other words, this fusion seems to be an ancient one, predating our species by several hundred thousand years. Present estimates of the last common ancestor between humans and Neanderthals / Denisovans  range at about 800,000 years ago.</p>

<h3>Implications for understanding our “becoming human”</h3>
<p>The main implication from this work is that it places the fusion event well before the advent of our species. I’ve often chatted informally with Christians about evolution, and at times some have thought that this fusion event was what “started” our species, or made our species unable to interbreed with other groups. Some have even suggested that perhaps the fusion event was what produced the first human (i.e. Adam). </p>

<p>Note that thinking this way suggests a misunderstanding of how chromosome fusions occur and what effect they have on their hosts. A fusion does not precipitate a speciation event, but rather the individual with the fusion remains a part of his or her population, and able to interbreed, even if with reduced fertility. Also, there is no necessary biological effect or change that the fusion produces on the appearance of the organism.  These misunderstandings aside, however,what this new evidence shows is that this fusion event took place long before modern humans arose at around 200,000 years ago. Indeed, the 800,000 years ago date for the last human - Denisovan common ancestor means that this is the most recent date possible for the fusion. While it is an interesting piece of our evolutionary history, it doesn’t seem to have much to do with how we came to acquire the traits that set us apart from, and ultimately outcompete, other similar species.</p> 
<br> </br>]]></content:encoded>
        <pubDate>Thu, 06 Sep 12 13:07:21 -0700</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
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        <title>Science and the Bible: Theistic Evolution, Part 1</title>
        <link>http://biologos.org/blog/science&#45;and&#45;the&#45;bible&#45;theistic&#45;evolution&#45;part&#45;i?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/science&#45;and&#45;the&#45;bible&#45;theistic&#45;evolution&#45;part&#45;i?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The dictionaries I checked don’t define the term, “theistic evolution,” so I offer my own definition: the belief that God used the process of evolution to create living things, including humans.</description>
        <content:encoded><![CDATA[<p>The dictionaries I checked don’t define the term, “theistic evolution,” so I offer my own definition: the belief that God used the process of evolution to create living things, including humans. Some might find this a vague definition, since (for example) it doesn’t include the adjective “Darwinian” before “evolution,” but that would eliminate most of the people prior to World War Two who would otherwise fit the definition. On the other hand, if we left out a specific reference to human evolution, then the category would be even larger, since a number of important Christian writers have accepted evolution among the “lower animals,” while explicitly rejecting it for human beings. We could argue endlessly about such things, and not pointlessly; my point here is simply to be clear about terminology.</p>

<p>“Theistic evolution” has been discussed by that name since at least 1877, and one of the first to do so was the great Canadian geologist John W. Dawson, in his book, <em>The Origin of the World, According to Revelation and Science</em> (1877). In the midst of a lengthy discussion of the animals created on the fifth day of creation, he says:</p>

<blockquote>The long time employed in the introduction of the lower animals, the use of the terms “make,” and “form,” instead of “create,” and the expression “let the waters bring forth,” may well be understood as countenancing some form of mediate creation, or of “creation by law,” or “<strong>theistic evolution,</strong>” as it has been termed; but they give no countenance to the idea either of the spontaneous evolution of living beings under the influence of merely physical causes and without creative intervention, or of the transmutation [evolution] of one kind of animal into another.  (p. 225)</blockquote>

<p>As the final part of this sentence implies, Dawson was (ironically) a staunch opponent of both human evolution and the common ancestry of other animals; in short, by no reasonable definition was he a theistic evolutionist, even though he thought that a great deal of change had taken place naturally, “within certain limits” that he associated with the created “kinds” spoken of in Genesis. Indeed, references to “theistic evolution” are probably no less common among opponents of the view (including William Jennings Bryan in the 1920s) than among proponents, but I won’t attempt to enumerate further examples.</p>

<p>In recent years, however, some proponents of TE have endorsed alternative labels for their position(s). The most prominent example is Francis Collins, the geneticist who started BioLogos. Collins uses the term “BioLogos” itself as the label for his <a href="http://biologos.org/questions/biologos-id-creationism">overall position</a>, which fits well within my TE category. The evangelical theologian <a href="http://www.ualberta.ca/~dlamoure/">Denis Lamoureux</a>, one of the most qualified of all writers on this topic (he has earned doctorates in both theology and biology), strongly prefers the term, “Evolutionary Creation” (EC), precisely because he thinks the noun “creation” ought to have more emphasis than the adjective “evolutionary,” something that the term “theistic evolution” does not accomplish. I recommend <a href="http://biologos.org/resources/books/evolutionary-creation">his book of that title</a> to anyone who wants an authoritative analysis of both biblical and scientific aspects of the origins controversy. The main ideas are clearly presented in his <a href="http://www.ualberta.ca/~dlamoure/web_lectures.htm">web lectures</a>. Another highly qualified proponent of TE, George Murphy, also has reservations about the term, but he recognizes its wide recognition and agrees with <a href="http://www.theologyweb.com/campus/showthread.php?29480-Deep-Theistic-Evolution">the idea itself</a>, that “Evolution is God’s way of creating”. I will have more to say about Murphy, a very important voice, in a subsequent post.</p>

<p>Despite these quite reasonable objections to the term, I continue to use the “TE” term, partly because it has historical continuity and I’m an historian, and partly because it’s easily recognized. If anyone wants to object, however, they won’t get objections from me, unless their own reasons aren’t reasonable. My only request: define your terms as clearly as I’ve defined mine.</p>

<p>Because the term is broad and a bit hazy, more should be said about it. When we talk about “Intelligent Design” next month, I’ll tell you that it’s a “big tent” (something proponents of that view also say), insofar as it glosses over the biblical and theological issues that have usually separated Christians into various “camps” (such as the various positions we are now studying) when it comes to origins. TE is also a “big tent,” in that adherents differ strongly amongst themselves on theological and biblical issues. Unlike ID, however, theology is openly discussed—and competing theologies of God, nature, and humanity are openly advocated, not left implicit. We’ll say more about this next time. This column presents one type of TE, a type favored by many evangelical scientists and scholars. For example, the people I will discuss all accept (as far as I can tell) the Incarnation and Resurrection—that is, they are Trinitarian Christians who believe that Jesus was fully divine (and fully human) and that the disciples went to the right tomb, only to find it empty, before encountering the risen Christ in diverse places. They also believe in <em>creation ex nihilo</em>, the classical view (illustrated at the start of this column) that God brought the universe into existence out of nothing. There are other types of TE, some of which are not (in my opinion) sufficiently biblical, or even sufficiently Christian, to be part of this series. Please keep that in mind as we proceed: don’t tar all TEs with the same brush—something that happens all too often elsewhere. Let knowledge, not ignorance, be our guide. </p>

<h3>Core Tenets or Assumptions of Theistic Evolution</h3>
<p style="margin: 0 0 0 20px;">(1) The Bible is <em><strong>NOT</strong></em> a reliable source of scientific knowledge about the origin of the earth and the universe, including living things—because it was never intended to teach us about science.</p>
<p>This reflects not only modern scientific knowledge, but also (more importantly) modern biblical scholarship. Peter Enns and some other evangelical scholars have recently stressed this point, initiating a firestorm in the evangelical academic community that, so far, has confirmed my view that evangelicals in general are just not ready to <a href="http://erb.kingdomnow.org/the-evolution-of-adam-peter-enns-feature-review/">deal with this</a>, even though it is consistent with the classical notion of accommodation. My own comments about the magnitude of the problem, written before the firestorm started, can be found <a href="http://evanevodialogue.blogspot.com/2008/06/evangelicals-evolution-and-academics.html">here</a>.</p>

<p style="margin: 0 0 0 20px;">(2) The Bible <em><strong>IS</strong></em> a reliable source of knowledge about God and spiritual things.</p>
<p>Remember the quip that Galileo attributed to Cesare, Cardinal Baronio, “The intention of the Holy Ghost is to teach us how one goes to heaven, not how heaven goes.” (We discussed this earlier in <a href="http://biologos.org/blog/galileo-and-other-good-books-about-science-and-the-bible">the series</a>). Evolution was not an issue in Galileo’s day, but this platitude is frequently quoted by advocates of TE—and often without proper attribution to Baronio. Commonality obviously lies in the attitude, not the topic. Many critics of TE are willing to adopt Galileo’s approach when it comes to the Solar System, but not when it comes to evolution: they are anxious to <a href="http://biologos.org/blog/galileo-and-the-garden-of-eden-part-2">keep Galileo out of the garden of Eden</a>.</p>
 
<p class="caption-right"><img src="http://biologos.org/uploads/static-content/ted_ted_second.jpg" alt="" height="349" width="270"  /><br />
Portrait of Cesare, Cardinal Baronio,<br />attributed to Caravaggio (1602-3) (<a href="http://caravaggio.com/preview/images/250/I000432.jpg">Source</a>)</p>

<p style="margin: 0 0 0 20px;">(3) Scientific evidence is <em><strong>irrelevant</strong></em> to the Bible—it is simply not a science book.</p>
<p>See above. This needs to be stated separately, since some believers look to science for “proof” of the Bible, just as some unbelievers look to science for “disproof.” Proponents of TE stress that science and the Bible aren’t like apples and oranges; rather, they are more like apples and rocks: you can hold one in each hand without tension, but they have very little in common. We wouldn’t look for God in the phone book, or in an automobile repair manual. Don’t look for science in the Bible. In principle, scientific theories neither support nor threaten the Bible.</p>

<p style="margin: 0 0 0 20px;">(4) The creation story in Genesis 1 is a confession of faith in the true creator, intended to refute pantheism and polytheism, not to tell us how God actually created the world. </p>

<p>This is meant to echo what we said about the <a href="http://biologos.org/blog/science-and-the-bible-the-framework-view">Framework View</a>. It is not necessarily true that all TEs accept the Framework View or something like it, but many do. Most would probably say that the Bible is not contradicted by any specific scientific theory of biological diversity—unless that theory oversteps its philosophical boundaries and functions as a kind of religion, what Conrad Hyers called <a href="http://www.asa3.org/ASA/PSCF/1984/JASA9-84Hyers.html">“dinosaur religion.”</a></p>

<p style="margin: 0 0 0 20px;">(5) The Bible tells us <em><strong>THAT</strong></em> God created, not how God created</p>

<p>Again, this sounds like the Framework View—or, at least, it should. Belief in God the creator is consistent with science, and even supported by some aspects of science; but, it is not a <strong>substitute for</strong> scientific explanations. </p>

<h3>An Assignment: It’s Your Turn to Read and Write</h3>
<p>Astronomer Owen Gingerich has written an eloquent little TE book, <em><a href="http://biologos.org/resources/books/gods-universe">God’s Universe</a></em>. A number of quotations have been compiled <a href="http://www.alisonmorgan.co.uk/Gingerich%2006.pdf">here</a>. My <a href="http://www.firstthings.com/article/2007/04/300-all-things-bright-and-beautiful-36">review</a> for <em>First Things</em> identifies some of the key theological and philosophical issues related to TE. Please follow these links, study what you find, and offer comments below. If anyone has actually read the book itself, your views would be particularly valuable to include.</p>

<h3>Looking Ahead</h3>
<p>In our next column in two weeks, we continue our discussion of Theistic Evolution, focusing on some crucial theological aspects of TE. In the meantime, please do the “assignment” and get back to us. </p>
]]></content:encoded>
        <pubDate>Wed, 15 Aug 12 05:00:37 -0700</pubDate>
        <dc:creator>Ted Davis</dc:creator>
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        <title>David Lack and Darwin’s Finches</title>
        <link>http://biologos.org/blog/david&#45;lack&#45;and&#45;darwins&#45;finches?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/david&#45;lack&#45;and&#45;darwins&#45;finches?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Considering the immense popularity of &quot;Darwin&apos;s finches&quot;, it is quite surprising to learn that Charles Darwin himself had very little to say about them. In fact, it was actually David Lack, one century later, who conducted the critical research that immortalized the finches in biology textbooks and popular lore.</description>
        <content:encoded><![CDATA[<h3>Darwin’s Finches? </h3>

<p>Darwin’s finches are some of the most visible and recognizable symbols of evolution in the world today.  Biology textbooks feature them prominently, and the National Academy of Sciences has enshrined them in the entrance of their headquarters in Washington, DC.  Surely the finches that Darwin collected on the Galápagos islands were a central feature of his evolutionary theory, right?</p>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/Lacks_Finches_NASlobby.jpg" alt="Lobby of the National Academy of Sciences" height="350" width="570"  /></br>Lobby of The National Academies Building.  Courtesy of CPNAS. Photo by Robert Lautman</p>

<p>Actually, the Galápagos finches are never even mentioned in Darwin’s famous work <em>On the Origin of Species</em>.  Nor do they appear in Darwin’s famous notebooks on “Transmutation of Species”, in which he formulated the idea of evolution by natural selection.<sup>1</sup>  Even Darwin’s private diary of his voyage on the HMS <em>Beagle</em> only mentions the Galápagos finches briefly in passing.<sup>2</sup> </p> 

<p>It was only in 1845, in the second edition of <em>The Voyage of the Beagle</em>, that Darwin included a tantalizing sentence about the Galápagos finches:</p>

<blockquote>Seeing this gradation and diversity of structure in one small, intimately related group of birds, one might really fancy that from an original paucity of birds in this archipelago, one species had been taken and modified for different ends.<sup>3</sup>
</blockquote>

<p>However insightful this statement may have been, Darwin never published anything else about the Galápagos finches for the rest of his life.  Nor did he publically present these birds as direct evidence for this theory of evolution.<sup>4</sup> 
</p>

<p>If these finches were so important to Darwin’s evolutionary theory, why did he remain silent about them?  One of his comments in <em>The Voyage of the Beagle</em> provides us with a clue:</p>

<blockquote>Unfortunately most of the specimens of the finch tribe were mingled together; but I have strong reasons to suspect that some of the species of the subgroup Geospiza are confined to separate islands.<sup>5</sup> </blockquote>

<p>When Darwin was exploring the Galápagos himself in 1835, he had not formulated his theory of evolution yet, and thus he did know what data would be necessary to make definitive conclusions about finch evolution.  In particular, he did not keep careful track of which of his specimens came from which islands.   Moreover, as was customary among naturalists at that time, Darwin only collected a small number specimens—he brought home only 31 finches and 64 total birds from the Galápagos.<sup>6</sup>   </p>

<p>Though Darwin sensed that these birds were truly special, he lacked sufficient evidence to reach any specific conclusions about their evolutionary origins.  It would be up to the rest of the scientific community to carry out the necessary empirical research.  Subsequent expeditions in 1868, 1891, 1897, and 1905 brought back thousands of Galápagos finch specimens, but instead of unlocking the mysteries of evolutionary theory, the Galápagos finches became a great enigma.<sup>7</sup>  </p>

<p>A century after Darwin's voyage, scientists still struggled to explain the staggering variety of finches on this tiny, remote archipelago.  By the mid-1930’s, British Museum ornithologist Percy Lowe argued that the finches presented a "biological problem of first class importance", and he told the British Association for the Advancement of Science that the finches displayed a "bewildering diversity, intergradation, and distribution".<sup>8</sup>   Who would be up to the challenge of making sense of such tremendous biological complexity? It was David Lack.</p>
 
<h3>David Lack</h3>

<p class="caption-right"><img src="http://biologos.org/uploads/static-content/David_Lack.png" alt="Ornithologist David Lack" height="291" width="250"  /></br>Ornithologist David Lack</p>

<p>David Lack had an exceptionally keen eye for bird-watching, and he possessed a passion to match it.  By age 15, he had already observed 100 distinct species of birds, and before entering college, authored his first scientific paper.  At Cambridge University in the early 1930’s, Lack was disappointed to find that his zoology professors taught “nothing about evolution, ecology, behavior or genetics, and of course nothing about birds.”<sup>9</sup>  In fact, at that time, there were only two professional ornithologists in all of Britain!</p>

<p>Thus David Lack took it upon himself to create his own learning opportunities.   As an undergraduate, he became the president of the Cambridge Ornithological Club, traveled to Greenland for a bird-watching expedition, and cultivated a relationship with the prominent biologist Julian Huxley (grandson of Thomas Henry Huxley).  Huxley was an inspiring mentor and encouraged Lack to expand his research further by studying tropical birds.<sup>10</sup>  Following this advice, Lack embarked on a research trip to Tanzania in the summer of 1934, but his greatest adventure was yet to come. </p>

<p>In 1937, Lack became fascinated by the scientific mysteries surrounding the Galápagos finches.  But in order to study their behavior, Lack would need to travel to remote islands halfway around the world.   How could he possibly get there?  Once again, Julian Huxley was tremendously supportive and raised funds from two prominent scientific societies to pay for his expedition.  After a long delay, David Lack and five companions finally set off on their journey.</p>

<p>Instead of residing in comfortable quarters aboard a royal naval ship, Lack’s group subsisted on a shoestring budget, traveled on commercial steamers, and stayed with local settlers.  Their experience was definitely not a romantic tale of imperial expedition:</p>

<blockquote>The Galápagos are interesting, but scarcely a residential paradise.  The biological peculiarities are offset by an enervating climate, monotonous scenery, dense thorn scrub, cactus spines, loose sharp lava, food deficiencies, water shortage, black rats, fleas, jiggers, ants, mosquitoes, scorpions, Ecuadorian Indians of doubtful honesty, and dejected, disillusioned European settlers.<sup>11</sup></blockquote>

<p>Whereas Charles Darwin spent only nineteen days on the shores of the Galápagos, Lack and his crew conducted more than five months of meticulous and exhausting study in the harsh climate.  At that time, even the finches themselves provided little solace.  Lack wrote,</p>
	
<blockquote>Darwin’s finches are dull to look at, not only in their orderly ranks in museum trays, but also when they hop about the ground or perch in the trees of the Galápagos, making dull unmusical noises.  Only the variety of their beaks and the number of their species excite attention.<sup>12</sup> <strong></strong></blockquote>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/Lacks_Finches_Cactus_Finch.jpg" alt="Large Cactus Finch–the Galapagos." height="215" width="320"  /></br>Large Cactus Finch on Española Island in the Galápagos Islands</p>

<p>The repetitive tedium requisite for important scientific discoveries is rarely discussed in public, and even today many bright-eyed science students become disillusioned by the painstaking work demanded by their Ph.D. programs.  But one of the things that distinguishes great scientists is their unwavering commitment and tenacity in completing major projects. David Lack's efforts were not in vain: </p>

<p><em>"Despite his personal discomforts (or perhaps because of them), Lack did see something on the Galápagos that no one had ever seen before—natural selection at work among its finches through interspecies competition."</em> <sup>13</sup></p>

<p>When the birds’ breeding season ended in 1939, Lack was ready to return to his home in England.  But the captive finches that he had brought with him fared so badly on the voyage home that he detoured to San Francisco and put them in the care of the California Academy of Sciences.  Turning this mishap into an opportunity, Lack stayed there for five additional months to study the Academy’s enormous  collection of Galápagos finch specimens.<sup>14</sup> </p>

<p>To complete his systematic research, Lack then travelled across the United States to study the Galápagos finch collection housed at the American Museum in New York.<sup>15</sup>   Altogether, Lack examined more than 8000 specimens and specifically measured the length, width, and depth of all their beaks.<sup>16</sup> </p>

<p>Lack’s final obstacle was in getting his research published.  Though he completed his academic manuscript “The Galápagos Finches—A Study in Variation” in 1940, paper shortages during World War II delayed its publication by the California Academy of Sciences until 1945.  Were he only interested in making an original contribution to science, Lack could have stopped here and congratulated himself on a job well-done.  However, his motivation sprung from a deeper source:</p>

<p class="caption-right"><img src="http://biologos.org/uploads/static-content/Lacks14finches_sm.jpg" alt="David Lack's illustration of 14 Finches" height="455" width="300" /> </br>David Lack's drawing of 14 species of Galápagos finches, p. 19 of <em>Darwin’s Finches</em></p>

<p><em>"I did not watch birds primarily for scientific reasons but for sheer enjoyment, and from the age of 15 onward returned day after day in a glow of excitement after seeing a new bird or a new habit."</em> <sup>17</sup></p>

<p>Lack’s joyful fascination with the Galápagos finches inspired him to continue developing his conclusions long after returning from his expedition.  While waiting for his academic paper to be published, he began writing a book that would enable students and the general public to share his excitement about these remarkable birds and the evolutionary processes that shaped them.</p>

<p>First published in 1947, Lack’s book became tremendously influential.  Before this time, biology textbooks had never even mentioned the Galápagos finches.  But after David Lack’s study, the finches became a primary example of evolution by natural selection, specifically <a href="http://en.wikipedia.org/wiki/Adaptive_radiation">adaptive radiation</a>.  Not only did textbooks fully rely on Lack’s findings, they also followed his lead in calling them “Darwin’s finches”, the title of Lack’s famous book.<sup>18</sup> </p>

<h3>Iconic Finches</h3>

<p>What was it about these birds that made them such a prominent symbol of evolution?  As Darwin himself pointed out, the numerous Galápagos finch populations each have distinctive beaks, and he speculated that they could have evolved from an ancestral species that came to the islands.  But a complete picture of finch evolution would have to wait another hundred years, when David Lack arrived.</p>

<p>During his five months on the Galápagos, including both the rainy and dry seasons, Lack observed that these beak differences enable the finches to subsist on different kinds of food:</p>

<blockquote>The beak differences between most of the genera and subgenera of Darwin's finches are clearly correlated with differences in feeding methods.  This is well borne out by the heavy, finch-like beak of the seed-eating <em>Geospiza</em>, the long beak of the flower-probing <em>Cactornis</em>, the somewhat parrot-like beak of the leaf, bud, and fruit-eating <em>Platyspiza</em>, the woodpecker-like beak of the woodboring <em>Catcospiza</em>, and the warbler-like beaks of the insect-eating <em>certhidea</em> and <em>Pinaroloxias</em>.<sup>19</sup>  </blockquote>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/finchbeaks_sm.jpg" alt="" height="270" width="350"  /> </br>Lack's image of beak adaptations from <em>Darwin’s Finches</em></p>



<p>Specializing in such different sources of food enables these finches to live in close proximity without directly competing with each other or driving populations to extinction.  The fact that so many of these closely related finches are able to co-exist is a remarkable fact in itself.  As Lack himself put it, “It is not only the origin, but also the persistence, of new species which require explanation.”<sup>20</sup> </p>

<p>But it is also fascinating to consider how these birds got to be so different in the first place.  How did a finch come to have a beak like a “parrot”, “woodpecker”, or “warbler”?  The answer lies in the distinct characteristics of the Galápagos.  Because the islands are so remote, no actual parrots, woodpeckers, or warblers ever settled on it.  In the absence of these species, the Galápagos finches were able to adopt feeding habits and forms that they would never have taken on a large continent full of other birds competing for food.  The isolation of these islands offered just the right conditions for us to see living examples of adaptive radiation.<sup>21</sup> </p>

<h3>Conclusion</h3>

<p>Considering the immense popularity of the Galápagos finches, it is quite surprising to learn that Charles Darwin himself had so little to say about them.  In fact, it was actually David Lack, one century later, who conducted the critical research that immortalized the finches in biology textbooks and popular lore.  By naming his landmark book <em>Darwin’s Finches</em>,<sup>22</sup>  Lack paid homage to the man whose voyage on the HMS Beagle helped transform the study of natural history.  But at the same time, Lack also obscured the fact that evolutionary biology is an enterprise conducted by a large community of brilliant scholars, not just the product of one man’s efforts.</p>

<p>This tendency to immortalize “great men of science” has also led many people to refer to modern evolutionary theory as <em>Darwinism</em>, despite the fact that it has substantially changed and developed over the past 150 years.  It is important to give credit where credit is due, and if that’s the case, we should seriously reconsider how we refer to the Galapagos finches.  Evolutionary biologist Dolph Schluter, who studied the finches several decades after David Lack, had this to say:</p>

<blockquote>I find Lack's intuition really stunning given how little information he had.  He's my hero actually… They should be called Lack's finches.<sup>23</sup></blockquote>

<p class="intro">In the second part of this series, we’ll explore the fact that David Lack, in addition to being a world-renowned evolutionary biologist, was also a devout Christian.  His study of evolutionary theory did not cause him to lose his faith; in fact, he actually <em>converted</em> to Christianity after completing his Galápagos finch research.</p>

<h3>For Discussion</h3>
<strong>We’ve seen in this essay that the term “Darwin’s finches” is misleading, especially since Charles Darwin himself didn’t make the Galapagos finches famous.  Is it also problematic that people refer to modern evolutionary theory as “Darwinism”?  What misunderstandings can arise by associating an entire field of science with just a single person? Share your thoughts in the comments section below.</strong></p>

<h3>Further Reading</h3>
<ul><li>Grant, Peter R.; Grant, B. Rosemary. <em>How and Why Species Multiply: The Radiation of Darwin's Finches</em>, Princeton University Press, 2008.</li>

<li>Sulloway, Frank J. (Spring 1982), "Darwin and His Finches: The Evolution of a Legend" (<a href="http://www.sulloway.org/Finches.pdf">PDF</a>), <em>Journal of the History of Biology</em> 15 (1): 1–53.</li>

<li>Weiner, Jonathon. <em>The Beak of the Finch: A Story of Evolution in Our Time</em>.  Vintage Books, 1995.</li></ul>

<h3>Notes</h3>
<p class="date">1.  Sulloway, F. (1983). "Darwin and his finches: The evolution of a legend." <em>Journal of the history of biology</em> 15(1): 32. Darwin’s notebooks on transmutation mentioned Galapagos tortoises and mockingbirds, not finches.<br>
2.  Lack, David. <em>Darwin’s Finches</em>.  Cambridge University Press, 1947: 9.  Confirmed by Sulloway (1983), p5. <br>
3.  Darwin, Charles. <em>Journal of researches into the natural history and geology of the countries visited during the voyage of H.M.S. Beagle round the world</em>. London: John Murray. 2d ed. 1845: 379-80.  This edition of the book also contained the drawings of four different finches that have become enshrined in biology textbooks and on the walls of the National Academy of Sciences in Washington, DC.  <br>
4.  Sulloway, p35.  Sulloway points out that the first published evolutionary account of the Galapagos finches was not until 1876, by Osbert Salvin: "On the Avifauna of the Galapagos Archipelago." <em>Trans. Zool. Soc. London</em>, 9:447-51.<br>
5.  Darwin (1845), p395.<br>
6.  Sulloway, p40.<br>
7.  Sulloway, p40.<br>
8.  Larson, E. J. <em>Evolution's Workshop: God and Science on the Galapagos Islands</em>. New York, Basic Books, 2001: 166-67.<br>
9.  Lack, David. (1973) “My life as an amateur ornithologist.” <em>Ibis</em>: 424. <br>
10.  Lack (1973), 425-27.<br>
11.  Lack (1947), p1.<br>
12.  Lack (1947), p11.<br>
13.  Larson, 167-68. <br>
14.  The California Academy of Sciences sponsored an expedition to the Galapagos in 1905-06 and collected nearly 9000 Galapagos finch specimens (Sulloway, p40).<br>
15.  In New York, Lack roomed with the curator of the finch collection—German émigré zoologist Ernst Mayr.  By developing this relationship, Lack had close ties with two of the biggest figures in the neo-Darwinian synthesis, Julian Huxley and Ernst Mayr (Larson, 168).<br>
16.  Larson, p168.<br>
17.  Lack (1973), p424.<br>
18.  Larson, p198.<br>
19.  Lack (1947), p60.<br>
20.  Lack (1947), p158.<br>
21.  See Lack’s concluding chapter on “Adaptive Radiation”, pp146-159 of <em>Darwin’s Finches</em> (1947).<br>
22.  British ornithologist Percy Lowe originally proposed the name “Darwin’s finches” in 1935, but the name did not catch on until Lack used it in his book.  See P.R. Lowe, (1936) "The Finches of the Galapagos in Relation to Darwin's Conception of Species." <em>Ibis</em>, 13th ser., 6:310-321.  (Cited in Larson, p287)<br>
23.  Schluter, in an interview with Edward Larson, 16 March 2000.</p>
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        <pubDate>Wed, 01 Aug 12 04:43:25 -0700</pubDate>
        <dc:creator>Thomas Burnett</dc:creator>
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        <title>Science and the Bible: The Framework View</title>
        <link>http://biologos.org/blog/science&#45;and&#45;the&#45;bible&#45;the&#45;framework&#45;view?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/science&#45;and&#45;the&#45;bible&#45;the&#45;framework&#45;view?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Although the Framework View has existed for about ninety years, its attitude toward the Genesis “days” is similar to that held by Augustine. He taught that God created all things at once and told us about it in the pattern of six days, in order that we could understand it. The days themselves, however, were “unknowable” and not meant as a “literal” description of the passage of time.</description>
        <content:encoded><![CDATA[<p>Although the Framework View has existed for almost ninety years and I’ve been familiar with the main idea since the mid-1980s, I didn’t know it even had a name until just a few years ago. The circumstances in which I learned it add some real-world flavor to a discussion that might already seem a bit too abstract for some readers, so I’ll tell you about it. I was in Manhattan, Kansas, for a few days, lecturing at Kansas State University, when I received an invitation to walk literally across the street and visit a class at Manhattan Christian College—a combination of words that may seem somewhat humorous, given that there is no Wall Street or Broadway anywhere in town. The students had on their desks copies of this book: <a href="http://www.barnesandnoble.com/w/the-g3n3s1s-debate-j-ligon-duncan/1004692480">The G3N3S1S Debate: Three Views on the Days of Creation</a>. According to the front cover, three views on origins were presented inside, with the final one being “The Framework View,” written by <a href="http://www.veritas.org/Presenters.aspx?pid=242">Lee Irons</a> and the late <a href="http://www.meredithkline.com/kline-biography/">Meredith Kline</a>. Not recognizing the term, I asked if I could look at the book, whereupon I realized that something I’d been telling students about for many years actually had a name.</p>

<br /><br />
<h3>No Football Coaches</h3>
<p>When I explain this position to students, I like to start with a little puzzle. Many years ago, after attending an academic conference in a major city, I was driving through the rural countryside some distance away, en route to an historic house that wasn’t well marked. As I got closer to where I thought I might start seeing some signs directing me to the house, I noticed a fair-sized hotel, restaurant, and bar off to one side of the road. What really caught my attention was a sign, prominently displayed at the start of the driveway, warning off a certain clientele: NO FOOTBALL COACHES, it said. Unfortunately I’d forgotten my camera, but this is pretty much what I saw.</p>
 
<p class="caption-center"><img src="http://biologos.org/uploads/static-content/football_coaches_sign.jpg" alt="" height="443" width="428"  /></p>

<p>When I show it in class, I ask the students to guess what this was all about: why such a sign outside of such a place? The stories they come up with are pretty good. My favorite involves two neighboring high schools, arch rivals, with the football coach at one having an affair with the wife of his opposite number, resulting in fist-fights in that bar every fall, when friends of one man or the other would go at each other in the bar, which was on the highway connecting the two school districts. After a few students have tried their luck to no avail, someone asks, where did this take place? Was it maybe in England, where football means soccer and coach means bus? Give that student an A, I say. It was England, on a highway running between York and Manchester. Now, who can fill in the blanks? Almost right away, a student will explain that soccer fans in England can be pretty rambunctious, and that a busload of them might not make the best impression on the rest of the clientele at a respectable country inn and pub. Thus, the manager would rather not have their business.</p>

<p>The take-away message, of course, is that there is always a context in which the meaning of a text is embedded. Unless you know something about the time and place in which a text is composed, you aren’t going understand what it actually says. The same is true for any part of the Bible, including the opening verses of Genesis. That’s the bottom line for the Framework View: if you don’t know anything about literature and culture in the Ancient Near East, you won’t understand what Genesis is really saying.</p>

<h3>Core Tenets or Assumptions of the Framework View</h3>
<p style="margin: 0px 0px 0px 20px;">(1) The “days” in Genesis have nothing to do with historical time; they are literary devices, employed by God in order to communicate the story of the creation in terms that we can understand.</p>

<p>This sounds like an example of the principle of accommodation, and it should. The activities of the six days of creation are arranged into a “framework” of two triads (days 1-3 and days 4-6), with parallel types of activities in each triad.</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/framework_gif.jpg" alt="" height="296" width="424"  /></p>
 
<p>Thus, light is created on the first “day,” and on the fourth “day” God makes the Sun and Moon, the two great lights in the firmament that produce light and “rule over” the day and the night. The air and sea appear on the second “day,” and on the fifth “day” God fills them with birds and fish, etc. In other words, the order of events seems to be more logical than chronological. The key element is the fourth day: as we noted in our discussion of Concordism, the Sun was not made until the fourth day, yet it was expressly given the task of producing the day and the night and we’ve had “evening and morning” since the first day. What’s going on here? How can this be taken “literally”? Advocates of the Framework view see a solution in the parallel triads.</p>

<p>Another way to see this focuses on the second verse in the Bible, which reads (in the American Standard Version, a translation that follows the Hebrew closely), “And the earth was waste and void; and darkness was upon the face of the deep: and the Spirit of God moved upon the face of the waters.” God is confronted by darkness, a watery abyss, and a formless earth—each of these features posing a problem for God, who deals with them in the subsequent six “days.” First, on “days” 1 to 3, God prepares the heavens and the Earth to be a home for the great creatures to come, by separating light from darkness, separating waters above the firmament from waters below the firmament, and causing the dry land to “appear” and to “put forth” vegetation. Then, on “days” 4 to 6, God makes the creatures and puts them in the places God has prepared—the Sun and Moon in the “firmament of heaven (day 4), birds in the air and fish in the seas (day 5), and finally “the beasts of the earth” and “man” on the land (day 6).</p>

<p>We emphasize that the Framework View is simply about <strong><em>the Bible</em></strong>, not about science. The Earth and the universe can be as “young” or “old” as anyone wishes to claim, because the literary form of early Genesis leaves this an open question. The “days” were probably meant to be understood “literally” as ordinary days, <em>but only in the context of a literary form that was <strong>not</strong> meant to be understood literally, when taken as a whole.</em></p>

<p>What about the seventh “day”? Because it lacks a “morning” and an “evening” in the text (have you ever noticed this?), some authors interpret the seventh “day” as a prophetic reference to God’s own eternal rest, which has not yet begun and which we will share with God in the eschatological future. An OEC book I discussed in my column on Concordism, Robert Newman’s <em><a href="http://www.amazon.com/gp/product/0944788971/ref=as_li_ss_tl?ie=UTF8&tag=thebiofou06-20&linkCode=as2&camp=1789&creative=390957&creativeASIN=0944788971">Genesis One and the Origin of the Earth</a><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=0944788971" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" /></em> (1977), advocates this interpretation (see pp. 65-66), and so do some advocates of the Framework View. </p>

<p style="margin: 0px 0px 0px 20px;">(2) When seen against the cultural and literary context of the Ancient Near East (ANE), it is clear that Genesis was written to combat the polytheism and pantheism of other creation stories. It was not written to provide a scientifically accurate account of the creation.</p>

<p>This is why the Sun and Moon are not even named on the fourth day: they were worshipped as divine beings by many people in the ANE, and the Hebrew author(s) of Genesis intentionally omit their names as an act of defiance against worshippers of those two false gods. (Remember: for the ancient Egyptians, the Sun was the chief god.) Furthermore, the stars are mentioned simply as an afterthought, at the end of verse 16: “And God made the two great lights; the greater light to rule the day, and the lesser light to rule the night: he made the stars also.” This was done deliberately, as a way of belittling the Babylonians and others who worshipped them. Indeed, the whole creation account stands in the face of polytheism, by affirming that the one true, invisible God has actually created all visible things, including the heavenly bodies. Nothing we see is divine: this is the essence of monotheism, stated bluntly and boldly.</p>

<p>(3) It is not possible to find a close match between what is proclaimed in Genesis—<strong><em>that God is the creator</em></strong>—and the details of natural history. We should not approach this text with inappropriate expectations.</p>

<p>For many readers, the crucial question awaits: according to the Framework View, is Genesis 1-3 historical in any meaningful sense? Here there is a division of the house, with authors falling into either of these two camps:</p>

<p>(1) <strong>Genesis 1-3 is an historical narrative</strong> (though not strictly chronological), not a creation myth. As Lee Irons and Meredith Kline emphasize in <em>The G3N3S1S Debate</em>, “The framework interpretation does <em>not</em> teach that creation was a nonhistorical event” (p. 220). The universe was actually created, Adam and Eve were the first humans, and the Fall was a real historical event. Some OECs like this approach, which can be seen as a looser type of Concordism than the day-age theory; Bernard Ramm’s “moderate concordism” might be understood as fitting into this category, even though he did not discuss the Framework View per se. </p>

<p>(2) <strong>Genesis 1-3 is not an historical narrative</strong>; it resembles some other, older ANE creation stories. Conrad Hyers advances this view in his book, <em><a href="http://www.amazon.com/gp/product/0804201250/ref=as_li_ss_tl?ie=UTF8&tag=thebiofou06-20&linkCode=as2&camp=1789&creative=390957&creativeASIN=0804201250">The Meaning of Creation: Genesis and Modern Science</a><img src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&l=as2&o=1&a=0804201250" width="1" height="1" border="0" alt="" style="border:none !important; margin:0px !important;" />
</em>; see below. Some aspects of the story reflect this: the days, the progression from chaos to order, and the creation of humans from mud or clay. These are common to other ANE stories, and they are present in Genesis because that’s what hearers in the ANE expected such stories to include. Other aspects of Genesis, however, are profoundly unlike other ANE stories: the transcendence of God and the de-deification of nature. These constitute the crucial, timeless, substantive message that God has revealed to us. Theistic evolutionists tend to like this non-historical approach, which is not usually seen as a kind of Concordism.</p>

<h3>Historical Comments</h3>
<p>The Framework View is modern, but its attitude toward the Genesis “days” is similar to that held by Augustine. As I explained in an <a href="http://biologos.org/blog/science-and-the-bible-concordism-part-three">earlier column</a>, he taught that God created all things at once and told us about it in the pattern of six days, in order that we could understand it. The days themselves, however, were “unknowable” and not meant as a “literal” description of the passage of time. </p>
<p>In the 19th century, the German scholar J. H. Kurtz put forth an interpretation that Ramm called the “pictorial day” view, which he considered to be a type of “Moderate Concordism,” the overall position that Ramm himself favored. Kurtz described the creation story as “prophetico-historical tableaux, [in] which are represented before the eye of the mind, scenes from the creative activity of God, each one of which represents some grand division of the great drama, some prominent phase of the development” (<em>The Bible and Astronomy</em>, 1861 Philadelphia edition, p. 110). His Scottish contemporary <a href="http://en.wikipedia.org/wiki/Hugh_Miller">Hugh Miller</a>, one of the most prolific and influential evangelical writers of his day, endorsed Kurtz’ interpretation, holding that “the form and nature of the revelation” in Genesis was “conveyed by a succession of sublime visions” (<em>The Testimony of the Rocks</em>, 1857 Boston edition, p. 180).</p>
<p>The Framework View itself, with the “days” arranged in parallel triads, was first proposed in 1924 by the Dutch scholar Arie Noordzij and made more widely known by another Dutch scholar, N. H. Ridderbos. His book—<em>Is There a Conflict Between Genesis 1 and Natural Science?</em>—was translated into English in 1957. Subsequently, Kline and the French theologian <a href="http://en.wikipedia.org/wiki/Henri_Blocher">Henri Blocher</a> have been its most prominent supporters.</p>

<h3>An Assignment: It’s Your Turn to Read and Write</h3>
<p>I’ve done most of the heavy lifting in this series, but now it’s your turn. As a way of getting into all three of the views we’ve studied thus far (not simply the Framework View), I’d like everyone to read an article by Conrad Hyers, <a href="http://www.asa3.org/ASA/PSCF/1984/JASA9-84Hyers.html">“Dinosaur Religion: On Interpreting and Misinterpreting the Creation Texts,”</a> <em>Journal of the American Scientific Affiliation</em> 36 (September 1984): 142-48. The questions below are intended as helpful suggestions; feel free to discuss other matters as well!</p>

<p>1.  What does Hyers mean by “dinosaur religion”?</p>
<p>2.  What is Hyers’ most basic objection to “creation science,” the YEC view?</p>
<p>3.  What does Hyers believe to be the true message of Genesis One?</p>
<p>4.  Overall, do you agree with what Hyers says? Why or why not? Whether or not you agree, do you have any critical comments?</p>

<p>NOTE: Hyers wrote a sequel, <a href="http://www.asa3.org/ASA/PSCF/1984/JASA12-84Hyers.html">“The Narrative Form of Genesis 1: Cosmogonic, Yes; Scientific, No,”</a> <em>Journal of the American Scientific Affiliation</em> 36 (December 1984): 208-15, in which he employs an interpretive scheme highly similar to the Framework View, although that term is not used. I encourage you to read this also, but our discussion will focus on the first article. </p>

<h3>Looking Ahead</h3>
<p>In our next column on August 14, we begin a lengthy discussion of Theistic Evolution. Although that is the view advocated (under an alternative name) by BioLogos, I will approach it no differently. After explaining its central tenets, we’ll examine them critically and outline its history. Between now and then, I’m keen to see your responses to the assigned reading. If you gotten this far, you’re more than just a casual reader. Tell us what you think of Hyers’ ideas.</p>
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        <pubDate>Tue, 31 Jul 12 05:00:16 -0700</pubDate>
        <dc:creator>Ted Davis</dc:creator>
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        <title>Series: The Human Fossil Record</title>
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        <description>In this series, James Kidder provides an intriguing study on transitional fossils and the evolutionary history of modern humans.  He begins by discussing the fossil record, explaining how new forms are classified. He then explains the physically distinguishing trait of humankind—bipedalism.  From the discovery of Ardipithecus, the earliest known hominin, to the australopithecines, the most prolific hominin, Kidder focuses on the discovery, the anatomy, and the interpretation of these ancestral remains.</description>
        <content:encoded><![CDATA[<h3>Discovery</h3>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/Eugene_Dubois.jpg" alt="" height="320" width="240"  /></br>Eugene Dubois</p>
It was 1890 and <a href="http://en.wikipedia.org/wiki/Eugene_Dubois">Eugene Dubois</a> was tired.  He had searched everywhere in Sumatra for the human ancestors that were supposed to be there—at least according to the theories of his mentor, famed German naturalist Ernst Haeckel.  Instead, he had found only heat and malaria.</p>

<p>13 years before, in 1877, Dubois had arrived in Amsterdam to study medicine, but always harboring a desire to study the ancestry of modern humans.  So, after four years at the University there, he accepted an invitation to go to the University of Utrecht to study comparative anatomy and devote himself to the latest thinking about the origins of the human species.  It was during his time at Utrecht (from 1881 to 1887) that Dubois became enamored of Haeckel’s views on human origins, which differed from those of Darwin.  While Darwin argued that humans had evolved in Africa, the region in which our closest living relatives—the chimpanzees and gorillas—still live, Haeckel believed that the origins of humanity lay in East Asia.  This was so, he believed, because of his own observations of gibbons that walk bipedally when on the ground. </p>

<p>Haeckel also believed that there had once been a large landmass called Lemuria between the continents of Africa and Asia.  In his view, Lemuria  had since become submerged, leaving the modern islands of Madagascar and the East Indies as its only remains.  The idea of submerged continents was not unusual for the late 19th-century, as people struggled to understand the character of biological diversity present in the world and why there were such striking similarities between animals that were geographically dispersed.  The geographical distribution of marsupial fossils in South America and Australia is an example of this sort of problem, and one that was not solved until the second half of the 20th century when continental drift reconstructions suggested that ancient marsupials had used Antarctica as a conduit between the other two continents.  Not only did such theories make sense of modern distributions, they were confirmed with later discoveries of marsupial fossils in Antarctica.</p>

<p>In any case, in 1888 Dubois joined the army and set out for the Dutch East Indies to pursue his ideas.  For the next two years, he would comb Sumatra attempting to locate the hominin remains that Haeckel promised would be there. In hindsight, what Dubois was attempting was something that had never been done before: discovery of hominin material through the tools of archaeological excavation.  Up to this point, all of the human fossils had been found on the surface, eroding out of the side of a bank, or as a result of farming.  It had not occurred to anyone to go looking for human ancestors.  </p>

<p>Now, with his supply of prison workers dwindling due to desertion and fever, he had almost run out of options and was on the verge of failure.  Using almost all of his remaining resources, he decided to abandon his excavations on Sumatra and turn to the nearby island of Java.  Emboldened by the fact that early modern human fossils had been discovered there (at Wadjak), he arrived and settled in at Trinil, on the banks of the Solo River, in 1890. </p>

<p class="caption-right"><img src="http://biologos.org/uploads/static-content/kidder_10_1_1.jpg" alt="" height="377" width="318"  /><br />Figure 1: Dubois' <em>Pithecanthropus erectus</em></p>

<p>The very next year, Dubois’ long-standing efforts were finally rewarded, first with the discovery of a skullcap (calvaria) of a hominin cranium, and then with an intact femur (Figure 1).  Judging by what he knew of cranial anatomy, Dubois estimated that the skull would have been approximately 900 cubic centimeters (cc) in volume, placing it below even the lowest threshold of modern humans.  Further, he noticed that it was not like modern humans in shape, being too long and low. He concluded that it showed “evidence of a form intermediate between man and the anthropoid apes” (Dubois, 1896). Dubois envisioned a sequence of forms in which the gibbon gave rise to a form of chimpanzee called <em>Anthropopithecus sivalensis</em>, which then gave rise to the form represented by the Trinil remains, after which <em>Homo sapiens</em> arose (Turner, 1895).  </p>

<p>Dubois spent the next twenty years on the road with his find, trying to drum up support for its place in human prehistory.  As with Raymond Dart’s discovery of the first australopithecine thirty-three years later, Dubois did not receive a warm reception.  Most critics simply said that he had gotten it wrong and that the femur did not belong to the same individual as the obviously-primitive skull cap. Some of the criticism Dubois suffered could have been mitigated had he been more open to sharing the Trinil materials; but, instead, he allowed very little access to the bones, so that very few people knew exactly what they looked like. Adding to Dubois’s credibility problems was the 1911 “discovery” of Piltdown.  This intentional hoax turned the paleoanthropology world on its head for forty years, sending researchers down innumerable rabbit holes.  As I noted in a <a href="http://biologos.org/blog/the-dispersal-of-the-australopithecines">previous post</a>, the Piltdown remains made all of the other hominin finds appear too “ape-like” to be on the road to humanity and informed many opinions about finds such as those from Trinil.  </p>

<p>On the other hand, some critics of Dubois’ new hominin claim were vicious, and questioned both his academic abilities and his judgment (Shipman & Storm, 2002)—in addition to the interpretation of the find itself. It was in reference to Dubois’ work that the term “Missing Link” was first used with reference to a particular human fossil, originating with Charles Lyell (1863) and describing palaeontological gaps.  And ironically, it was in one of the most stinging criticisms of Dubois’ work that the name that would eventually stick was first used: “<em>Homo erectus</em>.” Eventually, many other finds in the same general area and across Southeast Asia demonstrated that what Dubois had found <em>was</em> a real, previously-unknown hominin form, and the first to colonize the Asian continent and the islands leading off towards Oceania. </p>

<h3><em>Homo erectus</em> across South East Asia: </h3>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/kidder_10_1_2.jpg" alt="" height="180" width="215"  /><br />Figure 2: Sangiran 17</p>

<h4><em>Sangiran</em></h4>

<p>The earliest point at which <em>Homo erectus</em> appears to have begun to colonize the greater East Asian region is around 1.8 million years ago, represented first by the partial child’s skull found at the site of Modjokerto, and then, at around 1.66 million years ago, at the site of Sangiran, in Trinil, where Dubois had made his landmark discovery.  This site was rich, yielding the remains of many crania, perhaps best represented by Sangiran 17 (Figure 2), an almost complete skull.  </p>

<p>The material from the Sangiran site is very diverse morphologically, with some crania having capacities of as little as 700 to 800 cc, and other, larger heads with volumes in the range of 1000 cc. As with the late <em>Homo ergaster</em> finds from Africa, the remains from Sangiran yielded crania that were still widest at their bases, possessing large brow ridges. Some have thick cranial bones and are very robust (Sangiran 4), while others are very gracile (Sangiran 31).  What this variation means is not clear, but most workers believe it represents a very diverse diachronic population (that is, one group living and moving around over a long period) rather than separate species inhabiting the area.  The Sangiran site yielded fossil material in an almost continuous succession from approximately 1.66 million years ago to less than 800,000 years ago.  </p>

<p>Because the area of the excavations—the Sangiran Dome—is a volcanic deposit, the layers have been securely dated by the <a href="http://en.wikipedia.org/wiki/40Ar/39Ar"><sup>40</sup>Ar/<sup>39</sup>Ar method</a>, although questions remain about the historical sequence and distribution of other animals that lived there through the ages (its <a href="http://en.wikipedia.org/wiki/Faunal_succession">faunal succession</a>).  The problem is that many of the fossils were not found in context, and relating them directly to the stratigraphy is tenuous.  Despite this, most workers are comfortable with the earliest hominins in the region being at least 1.5 million years old.  </p>

<p>One of the things hampering workers in this region is the comparative paucity of recovered stone tools.  Those that have been found suggest a technological stage similar to the late Oldowan design, equivalent to that being created by the <em>Homo ergaster</em> populations inhabiting the area of Dmanisi and East Africa.  Unfortunately, none of the tools have been associated with the hominins directly so it is not exactly clear who made them.  </p>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/kidder_10_1_3.jpg" alt="" height="343" width="228"  /><br />Figure 3: Sambungmacan 3</p>

<h4><em>Sambungmacan</em></h4>

<p>Another major find from the area where Dubois brought <em>Homo erectus</em> to light is the cranium from the site of Sambungmachan.  This skull was reportedly found in 1977 but was then illegally sold to the antiquities market, where is spent considerable time in different collections before being “rediscovered” in 1998—in a New York nature curio shop called Maxilla and Mandible, Inc. (Delson et al., 2001).  This was an almost-complete calvaria (Figure 3), with only part of the base missing.  It is equivalent in size to the fossils from Sangiran, with a cranial capacity of around 1000 cc.  It has a large brow ridge extending all of the way across the top of the eyes, a long, low cranium with a sloping forehead and a maximum width near the cranial base—all features that are also characteristic of the late African <em>H. ergaster</em> and Sangiran crania.  Although we will never know exactly how old this cranium is, its morphology is consistent with that of the material from Sangiran.  </p>

<p class="caption-right"><img src="http://biologos.org/uploads/static-content/kidder_10_1_4.jpg" alt="" height="185" width="233"  /><br />Figure 4: Ngandong 6</p>

<h4><em>Ngandong</em></h4>

<p>Later in time, but also located on the Solo River, is the site of Ngandong, excavated by Oppenoorth in the early 1930s.  At this site, fourteen calvaria have been discovered, all of which show advanced <em>Homo erectus</em> characteristics: long and low in shape, with thick-bones and a distinctive brow-ridge. (Figure 4). As with the other Indonesian finds, dating the Ngandong material has been problematic.  The deposits at the site were originally thought to be around 100,000 years old, but this interpretation was turned on its head in 1996, when Swisher and colleagues claimed that the deposits were no older than between 27,000 and 53,000 years old (Swisher et al., 1996).  These age estimations were made on the associated fauna, however, and as Rainer Grün and the late Alan Thorne pointed out, the faunal material does not match the skulls either in color or in texture and is likely not from the same time.  Recently, Swisher and colleagues revisited the dating of the site and derived internally-consistent dates of at least 143,000 years before the present (Indriati et al., 2011).  As with the Trinil remains, however, there are no associated stone tools.  </p>

<h3><em>Homo erectus</em> in China</h3>

<p>The Chinese <em>Homo erectus</em> material is very widely scattered and working in the region has presented many difficulties for researchers in terms of transport, language barriers and funding.  Consequently, we know less about this region and its previous inhabitants than we do about most other areas of the Old World.  Although there are between ten and fifteen sites that have yielded <em>Homo erectus</em> material, I will only touch on the most important ones.  </p>

<h4><em>Lantian</em>:</h4>

<p class="caption-right"><img src="http://biologos.org/uploads/static-content/kidder_10_1_5.jpg" alt="" height="164" width="192"  /><br />Figure 5: Lantian</p>

<p>In the early 1960s, a cranium and mandible were found in the cave of Lantian, Shaanxi province, whose characteristics matched other remains from China designated as <em>Homo erectus</em>.  Paleomagnetic dating has yielded a date no earlier than 1.15 million years ago for the skull, with the consensus being that it is around 800,000 years old.  A date of approximately 650,000 years before the present was derived for the mandible. The cranium is heavily encrusted and suffered from postmortem deformation (Figure 5).  When reconstituted, it was found to have a capacity of around 780 cc (low for <em>Homo erectus</em>) and the bones on the sides of the head are the thickest yet recorded. At this site some flake tools, mammal remains, and an ash deposit were all recovered, suggesting hunting and control of fire.  </p>

<p class="caption-left"><img src="http://biologos.org/uploads/static-content/kidder_10_1_6.jpg" alt="" height="144" width="204"  /><br />Figure 5: Hexian</p>

<h4><em>Hexian</em></h4>
	
<p>Another almost-complete calvaria was found at Longtandong cave in the province of Hé Xiàn, dated to between 400,000 and 500,000 years ago.  This find exemplifies typical <em>Homo erectus</em> in many ways in that it is long and low, with heavy muscle markings toward the base and the rear of the skull (Figure 6).  The cranial capacity is around 1000 cc, a third-again greater than that of the Lantian calvaria.  Its cranial shape is very similar to those found in Southeast Asia, suggesting that it straddles the Southeast Asian and Chinese boundary.</p>

<p>While both Lantian and Hexian were significant finds, another site in China boasted the single largest collection of <em>Homo erectus</em> fossils ever found at one site, as well as presenting one of the greatest mysteries in paleoanthropology.  Tomorrow, in the conclusion of our look at <em>Homo erectus</em> in Asia, we’ll peer into the Zhoukoudian caves and consider how this species fits into the lineage of man.
</p>]]></content:encoded>
        <pubDate>Sun, 29 Jul 12 04:59:44 -0700</pubDate>
        <dc:creator>James Kidder</dc:creator>
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        <title>Southern Baptist Voices: Essentialism and Evolution, Part 1</title>
        <link>http://biologos.org/blog/southern&#45;baptist&#45;voices&#45;essentialism&#45;and&#45;evolution&#45;part&#45;1?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/southern&#45;baptist&#45;voices&#45;essentialism&#45;and&#45;evolution&#45;part&#45;1?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>If what has been called an essence (Plato referred to these as Forms, and Augustine as Ideas in the mind of God or eternal reason) explains natural kinds, it is easy to see how this would logically lead to the idea of fixity of species.</description>
        <content:encoded><![CDATA[<p>I am grateful for the opportunity to enter this dialogue which in my thinking is fundamentally a discussion on the nature of reality. The following comments come from a philosophical perspective and not that of a scientist; however, the issue of evolution and its compatibility with Christianity surely has philosophical as well as theological dimensions. Richard Dawkins recognizes this and it is a comment he makes that raises what I think is a very salient point.  Let me be clear. My reference to Dawkins in no way should be understood to imply that the position of <em>BioLogos</em> has entailments of atheism, nor am I trying to connect Biologos with Dawkins in any way. Rather my point is that I think Dawkins puts his finger on something that goes to the heart of understanding evolution philosophically as well as theologically as it speaks to the nature of reality. </p>
 
<p>In his book <em>The Greatest Show on Earth</em> (2009) on the first page of the second chapter, Dawkins raises the interesting question: “Why did it take so long for a Darwin to arrive on the scene?” After suggesting possible answers he approvingly quotes the late Ernest Mayr's suspicion as the most insightful answer to this question. According to Dawkins, Mayr’s suspicion is: “The culprit was the ancient philosophical doctrine of---to give it its modern name—essentialism. The discovery of evolution was held back by the dead hand of Plato [Dawkins' language].” Later in his book, Dawkins states boldly that evolution is anti-essentialist, a point Mayr made in other places. One can find the same argument, if not the same language, in the writings of Edward O. Wilson where the idea of nature trumps any idea of something existing above experience. Clearly, I am not the first one to consider this argument. I think, however, that further discussion regarding the implications of essentialism for evolutionary models remains important especially for theists in particular and humanity in general. At the heart of this discussion is the matter of ontology, the nature of being. While evolution speaks to the development of what is, it necessarily carries with it very strong ontological implications, implications that affect views on the nature of being. If the idea of essence has no currency in the discussion of reality, then the thing itself is all there is and, hence, quickly becomes the object complete in itself. </p>

<img src="http://biologos.org/uploads/static-content/Bruce_Little_bio.jpg" alt="" height="328" width="250" style="float:right;margin:0px 0px 0px 10px;" />

<p> It seems that essentialism (I use this term with Christian emphasis), if true, would seriously challenge any form of evolution where different species evolve through common descent.  The point that Mayr and others have made turns on the idea that essentialism provided the philosophical foundation for the idea of fixity of species from at least the time of Plato. If right, that would make evolution, in the sense of producing new species, suspicious if not impossible. Furthermore, it seems that essentialism cannot be easily dismissed simply because it is associated with Plato. One must consider the philosophical/theological legitimacy of essentialism based on the merits of its own claims within the discussion of the nature of reality. With that said, if Mayr and others are right about essentialism, then the question to be taken up is whether essentialism has any ground upon which to stand, especially within Christian theology. </p>

<p>Generally speaking, essentialism teaches there is more to reality of the thing than what is presented to the senses which, is to say there is more to reality than the biological dimension (we might say DNA). It is the material that provides a means of expression of the essence. A member belonging to a natural kind is so because of its essence and all members belonging to this natural kind must have this essence or it does not belong. In this way, natural kinds are distinct from others by virtue of their essence. While essence determines what natural kind to which a thing belongs, there are also non-essential or accidental properties. These help to distinguish one member from another within a natural kind, but these are not determinative for the natural kind itself as they are subject to change while essential properties are not. That is, what makes a cow a cow is the essence belonging to being a cow. Without that, the cow could not be a cow. In other words the idea of essence is what gives stability to natural kinds. If essentialism is true this would, as Dawkins points out, seriously challenge the idea of common ancestry. </p>

<p>Applied to human beings, the essential attributes of humanness are predicated of beings called human beings which distinguishes them from non-human beings –this is not an arbitrary naming. While human beings (a natural kind) share universally the same essence of humanness, they do differ in non-essential properties (short, tall, thin, fat, and so forth). So while the members differ in many non-essential ways, they belong to the same natural kind by their shared essential attributes of human<em>ness</em>. </p>

<p>If what has been called an essence (Plato referred to these as Forms and Augustine as Ideas in the mind of God or eternal reason) explains natural kinds, it is easy to see how this would logically lead to the idea of fixity of species (which may be very broad allowing for a wide range of adaptations and variations within natural kinds which allows for a very rich biological diversity). The suggestion here is that it is time to rethink the matter of essentialism in this discussion. Of course there must be some reason to think that essentialism has merit on its own terms.</p>

<p>The fact that a being is determined by its essence finds support in understanding who Jesus is.  Consider what makes Jesus the God-Man. As argued by the early Church Councils, it was His nature (in Greek, <em>OUISA</em>). He had the nature of both---the essence of God and the essence of man. It was not that He had all the outward appearance and DNA function of a man that made him a man---it was more than that. He was a man, precisely because He possessed the nature (essence of a man) and He was God as He had the nature (essence of God). This at least supports the idea that a being is what it is, not by virtue of developmental issues, but because of its essence.</p>
 
<p>In thinking about essence, one might consider the matter of transubstantiation. One may discount transubstantiation on theological grounds, but it does say something interesting to the discussion of essentialism. It assumes that the bread is of one essence and the body is of another essence. In order for the wine to become blood (a different essence) it would take a miracle as one essence does not give way to a different essence in the process of nature. The idea of transubstantiation is discussed in Aristotelian categories; in this case substantive cause is what Aristotle meant by the what<em>ness</em> of a thing–that is, what makes it what it is. Additionally, Genesis 1:20 notes that living creatures were created according to their own kind (the whatness of the thing) supporting the idea of natural kinds, which is consistent with the idea of fixity of species.</p><br></br>

<p class="intro">Tomorrow in part 2, Dr. Little makes the case that modern science has unjustifiably marginalized essentialism because it does not fit within a purely physical understanding of reality.</p>
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        <pubDate>Tue, 17 Jul 12 04:01:33 -0700</pubDate>
        <dc:creator>Bruce A. Little</dc:creator>
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        <title>What evidence do we have for evolution besides fossils and genes?</title>
        <link>http://biologos.org/questions/what&#45;evidence&#45;do&#45;we&#45;have&#45;for&#45;evolution&#45;besides&#45;fossils&#45;and&#45;genes?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/questions/what&#45;evidence&#45;do&#45;we&#45;have&#45;for&#45;evolution&#45;besides&#45;fossils&#45;and&#45;genes?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Scientists have found multiple lines of evidence for evolution, not just one or two.  These types of evidence are independent of each other, coming from sources as different as ancient fossils and modern genetics labs. Evidence also comes from comparing the anatomy of creatures living today.  All creatures with four limbs (whether mammals, birds, or reptiles) have the same bone structure in each limb, pointing to their descent from a common ancestor. More evidence comes from biogeography.  Isolated islands are missing common species found on the mainland, but are filled with many unique species that can be related by a common ancestor. Finally, evidence comes from embryonic development.  As an embryo of a mammal grows, its heart develops through stages similar to fish, amphibians, and reptiles.  God’s creation declares the history of life in many different ways. All these ways are pointing to a consistent picture of God creating through evolution.</description>
        <content:encoded><![CDATA[<em>Coming soon.</em>]]></content:encoded>
        <pubDate>Fri, 13 Jul 12 13:25:46 -0700</pubDate>
        <dc:creator></dc:creator>
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        <title>The Fossil Record</title>
        <link>http://biologos.org/blog/the&#45;fossil&#45;record?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/the&#45;fossil&#45;record?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>There are two opposite errors which need to be countered about the fossil record: 1) that it is so incomplete as to be of no value in interpreting patterns and trends in the history of life, and 2) that it is so good that we should expect a relatively complete record of the details of evolutionary transitions within all or most lineages.</description>
        <content:encoded><![CDATA[<h3>The Fossil Record:  Is there enough evidence ?</h3>

<p>There are two opposite errors which need to be countered about the fossil record: 1) that it is so incomplete as to be of no value in interpreting patterns and trends in the history of life, and 2) that it is so good that we should expect a relatively complete record of the details of evolutionary transitions within all or most lineages.</p>

<p>What then is the quality of the fossil record?  It can be confidently stated that only a very small fraction of the species that once lived on Earth have been preserved in the rock record and subsequently discovered and described by <a onmouseover="toggle_visibility('pop1');" onmouseout="toggle_visibility('pop1');">science</a>.</p>

<div class="see-also" id="pop1" style="display:none;">A more expanded discussion of this topic can be found in Miller, K.B., 2003, “Common descent, transitional forms, and the fossil record,” IN, K.B. Miller (ed.), <em>Perspectives on an Evolving Crreation</em>, Wm. B. Eerdmans, Grand Rapids.</div>

<p>There is an entire field of scientific research referred to as "taphonomy" -- literally, "the study of death."   Taphonomic research includes investigating those processes active from the time of death of an organism until its final burial by sediment.  These processes include decomposition, scavenging, mechanical destruction, transportation, and chemical dissolution and alteration.  The ways in which the remains of organisms are subsequently mechanically and chemically altered after burial are also examined -- including the various processes of fossilization.  Burial and "fossilization" of an organism's remains in no way guarantees its ultimate preservation as a fossil.  Processes such as dissolution and recrystallization can remove all record of fossils from the rock.  What we collect as fossils are thus the "lucky" organisms that have avoided the wide spectrum of destructive pre- and post-depositional processes arrayed against them.</p>

<p>Soft-bodied organisms, and organisms with non-mineralized skeletons have very little chance of preservation under most environmental conditions.   Until the Cambrian nearly all organisms were soft-bodied, and even today the majority of species in marine communities are soft-bodied.  The discovery of new soft-bodied fossil localities is always met with great enthusiasm.  These localities typically turn up new species with unusual morphologies, and new higher taxa can be erected on the basis of a few specimens!  Such localities are also erratically and widely spaced geographically and in geologic time.</p>

<p>Even those organisms with preservable hard parts are unlikely to be preserved under "normal" conditions.  Studies of the fate of clam shells in shallow coastal waters reveal that shells are rapidly destroyed by scavenging, boring, chemical dissolution and breakage.  Occasional burial during major storm events is one process that favors the incorporation of shells into the sedimentary record, and their ultimate preservation as fossils.  Getting terrestrial vertebrate material into the fossil record is even more difficult.  The terrestrial environment is a very destructive one: with decomposition and scavenging together with physical and chemical destruction by weathering.</p>

<p>The potential for fossil preservation varies dramatically from environment to environment.  Preservation is enhanced under conditions that limit destructive physical and biological processes.  Thus marine and fresh water environments with low oxygen levels, high salinities, or relatively high rates of sediment deposition favor preservation.  Similarly, in some environments biochemical conditions can favor the early mineralization of skeletons and even soft tissues by a variety of compounds (eg. carbonate, silica, pyrite, and phosphate).  The likelihood of preservation is thus highly variable.  As a result, the fossil record is biased toward sampling the biota of certain types of environments, and against sampling the biota of others.</p>

<p>In addition to these preservational biases, the erosion, deformation and metamorphism of originally fossiliferous sedimentary rock have eliminated significant portions of the fossil record over geologic time.  Furthermore, much of the fossil-bearing sedimentary record is hidden in the subsurface, or located in poorly accessible or little studied geographic areas.  For these reasons, of those once-living species actually preserved in the fossil record, only a small portion have been discovered and described by science.  However, there is also the promise of continued new and important discovery.</p>

<p>The forces arrayed against fossil preservation also guarantee that the earliest fossils known for a given animal group will always date to some time after that group first evolved.  The fossil record always provides only minimum ages for the first appearance of organisms.</p>

<p>Because of the biases of the fossil record, the most abundant and geographically widespread species of hardpart-bearing organisms would tend to be best represented.  Also, short-lived species that belonged to rapidly evolving lines of descent are less likely to be preserved than long-lived stable species.  Because evolutionary change is probably most rapid within small isolated populations, a detailed species-by-species record of such evolutionary transitions is unlikely to be preserved.  Furthermore, capturing such evolutionary events in the fossil record requires the fortuitous sampling of the particular geographic locality where the changes occurred.</p>    

<p>Using the model of a branching tree of life, the expectation is for the preservation of isolated branches on an originally very bushy evolutionary tree.  A few of these branches (lines of descent) would be fairly complete, while most are reconstructed with only very fragmentary evidence.  As a result, the large-scale patterns of evolutionary history can generally be better discerned than the population-by-population or species-by-species transitions.  Evolutionary trends over longer periods of time and across greater anatomical transitions can be followed by reconstructing the sequences in which anatomical features were acquired within an evolving branch of the tree of life.</p>]]></content:encoded>
        <pubDate>Fri, 13 Jul 12 05:00:15 -0700</pubDate>
        <dc:creator>Keith Miller</dc:creator>
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        <title>What scientific evidence do we have about the first humans?</title>
        <link>http://biologos.org/questions/what&#45;scientific&#45;evidence&#45;do&#45;we&#45;have&#45;about&#45;the&#45;first&#45;humans?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/questions/what&#45;scientific&#45;evidence&#45;do&#45;we&#45;have&#45;about&#45;the&#45;first&#45;humans?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In recent decades, scientists have discovered more about the beginnings of humanity.  The fossil record shows a gradual transition over 5 million years ago from chimpanzee&#45;size creatures to hominids with larger brains who walked on two legs.   Later hominids used fire and stone tools and had brains as large as modern humans.  Fossils of homo sapiens in east Africa date back nearly 200,000 years.  Humans developed hearths for fire, stone points for spears and arrows, and cave paintings by 30,000 years ago.   By 10,000 years ago, humans had spread throughout the globe.   Genetic studies support the same picture.  Humans share more DNA with chimpanzees than with any other animal, suggesting that humans and chimps share a relatively recent common ancestor.  Also, the same defective genes appear in both humans and chimps, at the same locations in the genome—an observation difficult to explain except by common ancestry. Genetics also tells us that the human population today descended from more than two people. Evolution happens not to individuals but to populations, and the amount of genetic diversity in the gene pool today suggests that the human population was never smaller than several thousand individuals.  Yet all humans, of all races, are descended from this group.  Humanity is one family.</description>
        <content:encoded><![CDATA[<em>Coming Soon</em>]]></content:encoded>
        <pubDate>Thu, 12 Jul 12 14:34:24 -0700</pubDate>
        <dc:creator></dc:creator>
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        <title>Theory, Prediction and Converging Lines of Evidence, Part 2</title>
        <link>http://biologos.org/blog/understanding&#45;evolution&#45;theory&#45;prediction&#45;and&#45;evidence&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/understanding&#45;evolution&#45;theory&#45;prediction&#45;and&#45;evidence&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>We have already discussed hind limb and hair loss in whales, and now we turn to one of the remaining questions: tooth loss in the lineage leading to modern toothless whales.</description>
        <content:encoded><![CDATA[<p class="intro">One of the challenges for discussing evolution within evangelical Christian circles is that there is widespread confusion about how evolution actually works. In this (intermittent) series, I discuss aspects of evolution that are commonly misunderstood in the Christian community. In this post, we continue to explore how whale evolution is supported by converging lines of evidence from developmental biology and genetics. </p>

<p>In the <a href="http://biologos.org/blog/understanding-evolution-theory-prediction-and-evidence-1">previous post</a> in this series, we explored how evolution can force science into making predictions that seem counter-intuitive. For cetacean (whale) evolution, we saw that the preliminary lines of evidence (the fact that whales are vertebrates, and mammals, for instance) pointed to the prediction that modern whales are descended from four-limbed, land-dwelling ancestors. As we then noted:</p>

<blockquote><p>Instantly this prediction raises a host of uncomfortable questions: where did their hind limbs go? How did they acquire a blowhole on the top of their heads when other mammals have two nostrils on the front of their faces? How did they transition to giving birth in the water? What happened to the teeth of the baleen whales? What happened to the hair characteristic of mammals? and so on. In some ways, evolutionary thinking about whales creates more difficulties than it appears to solve.</p>

<p>And yet, these difficulties are the stuff of science. If indeed our “educated guess” of terrestrial, tetrapod ancestry for whales is correct, the evidence will show that these transitions, challenging though they may seem, did indeed occur on the road to becoming “truly cetacean”.</p> </blockquote>

<p>We have already discussed hind limb and  hair loss in whales, citing evidence from embryonic development in modern whales that shows how hair and hind limbs develop early in their embryogenesis, but then are lost at later stages. We now turn to one of the remaining questions: tooth loss in the lineage leading to modern toothless whales (order Mysticeti). To obtain their food these whales pass seawater through a <em>baleen</em>, a large sieve-like structure that filters out plankton, small fish and other food items. Some recent genetics sleuthing has investigated a portion of this riddle, and adds further details to the story of how the baleen whales came to be.</p>

<p align="center"><img src="http://biologos.org/uploads/static-content/humpback_whale_sml.jpg" alt="" height="337" width="450"  /></p>

<h3>Evolution: A Theory with Bite</h3>
<p>If indeed modern whales are descended from ancestral, four-limbed, terrestrial ancestors, then those ancestors, like mammals in general, had teeth. Modern toothed whales (order Odontoceti) have retained those teeth to the present day, but baleen whales have adopted a new way of life as filter-feeders. Researchers were curious to see if traces of a “toothed past” could be found in the genomes of modern baleen whales, so they went hunting for remnants of genes devoted to making teeth. Such defective gene remnants would be examples of <em>pseudogenes</em>, and we have discussed pseudogenes previously in this series. While pseudogenes in and of themselves are powerful evidence for evolution, pseudogenes that are “out of place” are especially so. One such example we have seen before is the human <em>vitellogenin</em> pseudogene, the remains of a gene used for yolk production in egg-laying organisms found in the exact location in the genome that evolution would predict for it. As mammals that receive embryonic nourishment through a placenta, we have no need of egg-yolk genes. Similarly, baleen whales have no need for genes responsible for making teeth, and finding the remnants of such genes would make a strong case for an evolutionary origin of baleen whales as the modified descendents of toothed whale ancestors.</p>

<h3>Independent Lines of Evidence, but Contradictory Stories?</h3>
<p>Some of the genes known to be used in all mammals for tooth formation were the obvious candidate genes to start with: the products of the ameloblastin, amelogenin, and enamelin genes are all used in the formation of tooth enamel, the hardest structure in the vertebrate skeleton. Researchers went looking for these genes in several Mysticete (i.e. toothless whale) species. The results showed that all the species studied did indeed have these three genes present as pseudogenes (and more specifically, as <em>unitary</em> pseudogenes, a special class of pseudogene we have discussed in detail <a href="http://biologos.org/blog/understanding-evolution-is-there-junk-in-your-genome-part-4">previously</a>). Finding these genes as pseudogenes in toothless whales was exactly what evolution predicted, but there was a catch: none of the mutations that removed the functions of these three genes were shared between different species, suggesting that these genes lost their function independently in the species studied. This finding was at odds with data from the fossil record, which suggested that teeth were lost only once, and early in the lineage leading to all modern toothless whales. So, the researchers seemed to have two lines of evidence that at face value contradicted each other. The fossil record suggested that tooth loss occurred once in the common ancestor of all toothless whales, but these three genes seemed to have been inactivated independently, several times over, suggesting that loss of teeth should be happening later in Mysticete evolution, and more than once.</p>

<p>One proposed explanation for the apparent discrepancy (among several put forward) was to predict that a fourth gene required for enamel formation was lost early in Mysticete evolution. The loss of any one gene necessary for forming enamel would be enough to prevent the process altogether. In this case, the loss of this fourth gene would prevent tooth enamel from forming, even though the genetic sequences of the other three enamel genes would still be intact. Once enamel function was lost, random mutations in the remaining enamel genes could then accumulate later in Mysticete evolution after speciation in this group was already underway. To test this hypothesis, the research group went hunting for other enamel genes in toothless whales.</p>

<h3>Signature in the SINE</h3>
<p>The smoking gun for tooth loss in Mysticetes turned out to be exactly what was predicted: a fourth gene, necessary for enamel production, and mutated with the same inactivating mutation in all modern toothless whales. The gene in question, named <em>enamelysin</em>, was destroyed when a mobile genetic element called a SINE transposon inserted into it, breaking it into two halves and removing its function:</p>
 
<p align="center"><img src="http://biologos.org/uploads/static-content/whale_evolution_fig_2_1.jpg" alt="" height="273" width="570"  /></p>

<p>The fact that the same SINE insertion mutation at an identical location is found in all modern Mysticete species indicates that this mutation happened once in a common ancestor and then was inherited by the entire group.  Since this must have occurred early in the evolution of toothless whales in order to happen in the common ancestor of the entire group, the picture from the genetics and the fossil record match. Once again, findings in one discipline (in this case, paleontology) can be used to make very detailed predictions about what another, unrelated discipline (comparative genomics) should reveal. These results are also entirely consistent with the observation, made in the 1920s, that toothless whales form tooth buds during embryogenesis that are later reabsorbed prior to the point when the deposition of enamel would begin. As with the hind limb story in whale evolution, lines of evidence from genetics, paleontology and embryology converge to support the hypothesis that modern toothless whales descend, through modification, from toothed ancestors.</p>

<p>In the next post in this series, we’ll examine a few more lines of evidence for whale evolution, and extend our discussion to converging lines of evidence for the evolution of our own species.</p>

<h3>For further reading:</h3>

<p>Meredith, R.W., Gatesy, J., Cjeng, J., and Springer, M.S. (2011). Pseudogenization of the tooth gene enamelysin (MMP20) in the common ancestor of extant baleen whales. Proceedings of the Royal Society B: 278 (1708); 993 – 1002. Available online: <a href="http://rspb.royalsocietypublishing.org/content/early/2010/09/16/rspb.2010.1280.full.pdf">http://rspb.royalsocietypublishing.org/content/early/2010/09/16/rspb.2010.1280.full.pdf</a></p>

<p>Ridewood, W.G. (1923). Observations on the skull in foetal specimens of whales of the genera Megaptera and Balaenoptera. Philosophical Transactions of the Royal Society of London B: 211; 209 - 272. Available online: <a href="http://rstb.royalsocietypublishing.org/content/211/382-390/209.full.pdf">http://rstb.royalsocietypublishing.org/content/211/382-390/209.full.pdf</a></p>

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        <pubDate>Thu, 05 Apr 12 05:15:22 -0700</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
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        <title>America&apos;s View on Evolution and Creationism (Infographic)</title>
        <link>http://biologos.org/blog/americas&#45;view&#45;on&#45;evolution&#45;and&#45;creationism&#45;infographic?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
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        <description>The BioLogos Forum is pleased to present this infographic about science and faith in America. The graphic uses data from Gallup Research, The New York Times, and the Pew Research Center to show what Americans currently believe about the origins of humans.</description>
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<p><strong>(Click Image for Full Resolution)</strong></p>]]></content:encoded>
        <pubDate>Wed, 04 Apr 12 06:42:15 -0700</pubDate>
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