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        <title>Custom Feed &#45; The BioLogos Forum</title>
    <link>http://biologos.org/resources/find/Blog/sort&#45;by&#45;Newest/sort&#45;by&#45;Newest/BioLogos,Genetics?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
    <description>This is a custom feed of BioLogos resources. Make a new feed at http://biologos.org/resources/find</description>
    <dc:language>en</dc:language>
    <dc:rights>Copyright 2013</dc:rights>
    <dc:date>2013-05-25T21:35:20-08:00</dc:date>    
    
    

            
            
        
      <item>
        <title>Series: Evolution Basics</title>
        <link>http://biologos.org/blog/series/evolution&#45;basics?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/evolution&#45;basics?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Written by BioLogos Fellow of Biology Dennis Venema, this series of posts is intended as a basic introduction to the science of evolution for non&#45;specialists.</description>
        <content:encoded><![CDATA[<p>Regular readers of the BioLogos Forum will know that over the past few years I have written extensively on various evidences for evolution, often with a focus on genetics evidence. Other posts have focused on scientific arguments put forward from groups such as the Intelligent Design Movement (IDM), or the Old Earth Creationist organization <em>Reasons to Believe</em> (RTB), with a view to showing why I find those arguments unpersuasive. Often these articles are deeply technical—to the point where my friends (perhaps on Facebook, perhaps in a conversation over coffee in the church foyer on Sunday) would comment that, as interesting as it looked, it was just over their heads. Now, these friends are intelligent people, and some are even interested in evolution—but they’re not folks who read extensively on the topic. Nor do they follow the IDM or RTB—they’re just average folks who would like to learn more, but need to start at the beginning and work up slowly – not jump in halfway through, with technical terms and jargon flying around. They need a <em>context</em> for the discussion. They need to explore the basics, &nbsp;first, before building on that understanding to explore the finer details.</p>

<p>So, I’ve decided to try a slightly different approach for the next while—one that has these sorts of folks in mind. From time to time, you can still expect those more in-depth, technical articles, or perhaps a discussion of some new research that makes the popular press, or even an analysis of some new argument from the IDM or RTB. These will be breaks from the new routine, however. For the most part, we’re going to stick to the basics, much like you would if you took an introductory evolution course at a university. Don’t worry, though: this course doesn’t have any prerequisites! All that’s needed is a willingness to learn.</p>

<h3>What you can expect</h3>

<p>The goal of this course is straightforward: to provide evangelical Christians with a step-by-step introduction to the science of evolutionary biology.&nbsp; This will provide benefits beyond just the joy of learning more about God’s wonderful creation. An understanding of the basic science of evolution is of great benefit for reflecting on its theological implications, since this reflection can then be done from a scientifically-informed perspective. From time to time we might comment briefly on some issues of theological interest (and suggest resources for those looking to explore those issues further), but for the most part, we’re going to focus on the science. For folks interested in the interaction between science and Christianity, I heartily recommend <a href="http://biologos.org/blog/science-and-bible">Ted Davis’ recent series</a> as a fabulous introduction to the topic.</p>

<p>You can also expect a slow, patient pace. Since this course is intended for folks with little or no background in biology, we’re going to take our time to make sure no one gets left behind. This might be frustrating to folks who already know a fair bit about evolution. Hopefully even more knowledgeable readers will learn some new and interesting details along the way—but the goal will primarily be to help folks who are less well versed in evolution increase their understanding.</p>

<p>You can also expect a survey of many different areas that have some bearing on evolution. We’ll examine geology, paleontology, biogeography, genetics, and a host of other topics in order to provide a “big picture” overview. This broad-brush approach means that any given individual post will not necessarily be “convincing” to folks who have doubts about evolution. Think about assembling a large jigsaw puzzle: placing any individual piece, on its own, doesn’t convincingly demonstrate what the overall picture will show. This course will be like that. Each topic we cover will put a few pieces in place here and there, slowly building towards the final overall picture.</p>

<p>Since evolution is an active science, this process will also highlight where there are “missing pieces” that are still being sought by scientists. All of this is well and good, since the purpose of this course is not so much to <em>convince</em> anyone of the validity of evolutionary theory, but rather to <em>inform</em> readers about the nature and scope of evolution as a scientific theory in the present day. My goal is to provide readers with a basic understanding of what evolution is and how it works. Given that as the primary goal, if one finds the scope of the evidence ultimately convincing (or not) is somewhat beside the point. The intent here is to provide readers with information they can use to make their own, informed decision.</p>

<h3>How you can help</h3>

<p>First and foremost, you can help by spreading the word about this series to folks you think would be interested in learning more about evolution in a non-threatening environment. Secondly, you can help me by asking questions in the comments. One of the challenges of being a specialist is having the ability to put oneself in the shoes of someone just starting out. What might seem obvious to me may not seem obvious to you, and I hope you’ll feel that no question is too basic or too simplistic. If you’re wondering about something, it’s almost guaranteed that other folks are, too! So, please don’t be shy. I’ll do my best to answer questions in the comments, though I hope that some of our more skilled commenters will (respectfully!) help out here, as well. Finally, you can help by letting me know what broader areas of evolution you find confusing. I have my own ideas about what areas of evolution are commonly misunderstood, but I’d love to hear from readers about what areas they find difficult to understand. I’ll use this input to shape the topics I will cover as we go forward.</p>

<h3>Getting started</h3>

<p>In the next post in this course, we’ll dive into the course content by introducing two key areas: how scientific theories work in general, and how evolution in particular works as the current organizing theory of modern biology.&nbsp;</p>
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        <pubDate>Fri, 17 May 13 07:00:37 -0700</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
        <!--<dc:date>May 17, 2013 07:00</dc:date>-->
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        <title>Biological Evolution: What Makes it Good Science? Part 2</title>
        <link>http://biologos.org/blog/biological&#45;evolution&#45;what&#45;makes&#45;it&#45;good&#45;science&#45;part&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/biological&#45;evolution&#45;what&#45;makes&#45;it&#45;good&#45;science&#45;part&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The Galápagos Islands were not a distinct “center of creation,” but a workshop for evolution in which an ancestral species made it to the yet uncolonized island and underwent a massive degree of speciation to adapt to the environment of the island. This is precisely what one would expect if the species of islands had arisen by evolution.</description>
        <content:encoded><![CDATA[<p>The second piece of evidence is found in living creatures, which are littered with the remnants of their ancestors’ ways of life.&nbsp; Bird and anteater embryos show tooth buds that are later absorbed and never erupt.&nbsp; Baleen whale embryos even develop teeth that are later resorbed.&nbsp; These are relics of their toothed ancestors.<sup>1</sup> Flightless kiwi birds have diminutive wings underneath their feathers, which testify to the ability of their ancestors to fly.&nbsp; Many cave-dwelling animals have rudimentary eyes that cannot see, even though eye development initiates in many of these species, but is later aborted.<sup>2</sup>&nbsp; The same can be said for the hind limbs of snakes, which form limb buds during embryonic development, but die off later.<sup>3</sup> All these are indications that they are descended from sighted and limbed ancestors, respectively.&nbsp;</p>

<p>Such remnants are also found in our genomes.&nbsp; Humans, unlike most mammals, cannot synthesize (make) our own vitamin C, but we carry the genes for synthesizing vitamin C.&nbsp; One of these genes encodes the GLO (L-gulonolactone oxidase) enzyme, and this gene in humans contains inactivating mutations and is therefore a “pseudogene.”&nbsp; This pseudogene and the genes that encode the enzymes of the vitamin C biosynthetic pathway are the remnants of our own evolutionary lineage from an ancestor that was able to synthesize its own vitamin C.<sup>4</sup> Furthermore, the GLO pseudogene is just one of a graveyard of inactivated genes, transposons, retroviruses and other non-functional sequences that litter our genome.&nbsp; While some of these sequences have been co-opted for particular functions, many of them have no known function.<sup>5</sup> We share many of these non-functional sequences with chimpanzees. &nbsp;The very presence of these genomic and anatomical flotsam and jetsam only makes sense if evolution has occurred.<sup>6</sup></p>

<p>A third piece of evidence for evolution comes from biogeography.<sup>7</sup> The flora and fauna of islands such as those of the Galápagos and Hawaii are radically unbalanced in that they lack many types of plants and animals but contain a profusion of clusters of similar species.&nbsp; Hawaii, for example, has no native mammals, reptiles, or amphibians, but a profusion of fruit flies and silversword plants.<sup>8</sup> One third of the 2,000 species of fruit flies are found on the Hawaiian Islands, which only covers 2 percent of the land on earth. &nbsp;These islands were never connected to the continents and arose as a result of volcanic activity and were, at least initially, completely uncolonized.&nbsp; The colonization of these islands occurred by means of occasional introduction of creatures from the mainland that then rapidly speciated on these islands to fill every available ecological niche.&nbsp; Thus, the organisms most closely related to island species come from the closest mainland areas, and often include those creatures most likely to find their way to islands, such as birds and flying insects.&nbsp;</p>

<p>The Galápagos Islands provide an excellent example of how biogeography provides evidence for evolution. The Galápagos have fourteen species of finch whose closest relative is probably the South American grassquit (<em>Tiaris</em>), yet only four of these finch species feed on seeds as finches normally do, while two others feed on cacti, seven eat insects, and another eats almost exclusively leaves.<sup>9</sup> Darwin, while visiting the Galápagos, still thought that species only varied within a particular kind (though he would not have used that terminology) but could adapt to various local environments and become particular subspecies. Therefore, he originally listed the warbler finch (<em>Certhidea olivacea</em>) as a wren and listed the small cactus finch (<em>Geospiza scandens</em>) as a member of the Icteridae or the family of meadowlarks and orioles.&nbsp; Only after Darwin had deposited his Galápagos specimens with the British ornithologist John Gould did Darwin discover (in a meeting with Gould that occurred during March, 1877), that his finch collection included thirteen or fourteen species of unusual finches that were all so closely related, Gould classified them in a single group all their own.&nbsp; This meeting showed Darwin that the immutable barrier between kinds of species did not exist.&nbsp; The Galápagos Islands were not a distinct “center of creation,” but a workshop for evolution in which an ancestral species made it to the yet uncolonized island and underwent a massive degree of speciation to adapt to the environment of the island.<sup>10</sup> This is precisely what one would expect if the species of islands had arisen by evolution.&nbsp;</p>

<p>A scientific theory also allows scientists to make predictions, and good theories provide accurate predictions.&nbsp; Can the theory of evolution allow accurate predictions?&nbsp; The answer, once again, is yes.&nbsp; Darwin himself predicted that the earth must be very old for evolution to occur.&nbsp; He did not know the age of the earth, but further research has shown that the earth is 4.55 billion years old, which is plenty of time for evolution to occur.&nbsp; Darwin also predicted that since plants on islands were most closely related to certain mainland plant species, the seeds of these plants should be able to withstand immersion in sea water for long periods of time, and again, Darwin was shown to be right.<sup>11</sup> Many decades after Darwin, we now know that variation in organisms is due to mutations in DNA and that these mutations are inherited, just as Darwin predicted.<sup>12</sup> Also, Darwin’s principle of natural selection predicts that particular sequences of DNA should behave in a manner that benefits only themselves and not their carriers, which modern research has thoroughly confirmed with the discovery of transposons and other types of “selfish DNA.”<sup>13</sup></p>

<p>Is evolutionary theory a good scientific theory?&nbsp; It has been repeatedly tested for over 150 years since its inception, and it has passed those tests successfully.&nbsp; The theory has been modified in response to new data, but the outlines of the theory have remained largely intact.&nbsp; It has existed at risk from new data.&nbsp; During the molecular biology revolution that began with the discovery of the structure of DNA by Franklin, Watson and Crick in 1953, the explosion of new data could have shown contemporary evolutionary theory to be wrong.&nbsp; However, some of the most powerful evidence for the theory of evolution has come from a field of science that did not even exist during Darwin’s time.&nbsp; The ability of a theory to withstand such intense scrutiny is a clear sign it is robust and enduring.&nbsp; As shown, the theory of evolution has predictive power, and it also integrates and makes sense of data from several fields of science, including ecology, paleontology, genetics, historical geology, paleoclimatology, and comparative anatomy and biochemistry.&nbsp; The highly integrative nature of evolutionary theory makes it a fine theory by any measure.&nbsp;</p>

<p>In conclusion, when measured against the standards of a good scientific theory, modern evolutionary biology clearly qualifies as good science.&nbsp; Ongoing debates within evolutionary biology exist about mechanism, rates, and causes, but not over whether evolution occurred.&nbsp; Such a question has been largely settled by the last 150 years’ worth of research.&nbsp; The future certainly looks bright for this field of science and I cannot imagine a more exciting topic to study.&nbsp;</p>

<h3>Notes</h3>

<p>1.&nbsp;Davit-Béal, Tiphaine,Abigail S. Tucker, and Jean-Yves Sire. “Loss of Teeth and Enamel in Tetrapods: Fossil Record, Genetic Data and Morphological Adaptations.” <em>Journal of Anatomy</em> 214, no. 4 (2009): 477–501.&nbsp;</p>

<p>2.&nbsp;Tian, Natasha M. M.-L., and David J. Price. “Why Cavefish are Blind.” <em>BioEssays</em> 27 (2005): 235–38; Yamamoto Y, Stock DW, and Jeffery WR (2004) Hedgehog Signalling Controls Eye Degeneration in Blind Cavefish. <em>Nature</em> 431:844–7; Jeffery, W. R. “Adaptive Evolution of Eye Degeneration in the Mexican Blind Cavefish.” <em>Journal of Heredity</em> 96, no. 3 (2005): 185–196.&nbsp;</p>

<p>3.&nbsp;Bejder, L., and B. K. Hall. “Limbs in Whales and Limblessness in Other Vertebrates: Mechanisms of Evolutionary and Developmental Transformation and Loss.” <em>Evolution and Development</em> 4, no. 6 (2002): 445–58.&nbsp;</p>

<p>4.&nbsp;Lachapelle, M. Y., and G. Drouin. “Inactivation Dates of the Human and Guinea Pig Vitamin C Genes.” <em>Genetica</em> 139, no. 2 (2011): 199–207.</p>

<p>5.&nbsp;Avise, John C. <em>Inside the Human Genome: A Case for Non-Intelligent Design</em>. New York: Oxford University Press, 2010.&nbsp;&nbsp; Romano, C. M., F. L. Melo, M. A. Corsini, E. C. Homes, and P. M. Zanotto.&nbsp; “Demographic Histories of ERV-K in Humans, Chimpanzees and Rhesus Monkeys.”<em> PLoS One</em> 2, no. 10 (2007): e1026. <a href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0001026">http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0001026</a>.&nbsp;</p>

<p>6.&nbsp;Max, “Plagiarized Errors and Molecular Genetics,” <a href="http://www.talkorigins.org/faqs/molgen">http://www.talkorigins.org/faqs/molgen</a>.</p>

<p>7.&nbsp;Coyne, Jerry A. “Intelligent Design: The Faith that Dare Not Peak Its Name.” In <em>Intelligent Thought: Science Versus the Intelligent Design Movement</em>, edited by John Brockman, 3–23. New York: Vintage, 2006.&nbsp;</p>

<p>8.&nbsp;Kricher, John. <em>Galápagos: A Natural History</em>. Princeton, NJ:&nbsp; Princeton University Press, 2006.&nbsp;</p>

<p>9.&nbsp;Grant, Peter R., and Rosemary B. Grant. <em>How and Why Species Multiply: The Radiation of Darwin’s Finches</em>. Princeton, NJ: Princeton University Press, 2011.&nbsp;</p>

<p>10.&nbsp;Sulloway, Frank J. “Why Darwin Rejected Intelligent Design.” In <em>Intelligent Thought: Science Versus the Intelligent Design Movement</em>, edited by John Brockman, 107–25. New York: Vintage, 2006.&nbsp;</p>

<p>11.&nbsp;Darwin, Charles.&nbsp;“On the action of sea-water on the germination of seeds.” <em>Journal of Proceedings of the Linnean Society of London</em> (Botany). 1 (1857): 130–140.</p>

<p>12.&nbsp;Futuyma, Douglas J. <em>Evolution</em>. 3rd ed. Sundbury, MA: Sinauer Associates, 2013.&nbsp;</p>

<p>13.&nbsp;Dawkins, Richard. <em>The Selfish Gene</em>. New York: Oxford University Press, 2006.</p>
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        <pubDate>Tue, 16 Apr 13 08:00:46 -0700</pubDate>
        <dc:creator>Michael Buratovich</dc:creator>
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        <title>Infographic: &quot;In the Pipeline&quot; for Our Evolution &amp; Christian Faith Grant Program</title>
        <link>http://biologos.org/blog/infographic&#45;in&#45;the&#45;pipeline&#45;for&#45;our&#45;evolution&#45;christian&#45;faith&#45;grant&#45;program?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/infographic&#45;in&#45;the&#45;pipeline&#45;for&#45;our&#45;evolution&#45;christian&#45;faith&#45;grant&#45;program?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Last month, we announced the 37 grantees from our Evolution &amp;amp; Christian Faith program! This month, we take a closer look at the projects and what’s “in the pipeline” over the coming years from these grantees!</description>
        <content:encoded><![CDATA[<p>Last month, we announced the <a href="/ecf/grantees">37 grantees from our Evolution &amp; Christian Faith program</a>! This month, we wanted to take a closer look at the projects and what’s “in the pipeline” over the coming years from these grantees! Below, we present a shareable infographic with some of the key information, including where our grantees hail from and what deliverables will be produced from our funds.</p>

<p><a class="infographic" href="/_base/infographics/ecf.png"><img alt="ECF Infographic" src="/_base/infographics/ecf.png" /></a></p>
]]></content:encoded>
        <pubDate>Mon, 01 Apr 13 08:00:46 -0700</pubDate>
        <dc:creator></dc:creator>
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        <title>Meet Jimmy Lin, “Medical and Scientific Doxologist”</title>
        <link>http://biologos.org/blog/meet&#45;jimmy&#45;lin&#45;medical&#45;and&#45;scientific&#45;doxologist?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/meet&#45;jimmy&#45;lin&#45;medical&#45;and&#45;scientific&#45;doxologist?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In our current culture, we’re defined by our jobs. It’s having a vocation. I wanted to shift away from that. I didn’t want to be a doctor first and foremost, or a scientist, but one who praises God.</description>
        <content:encoded><![CDATA[<p><strong>EMILY RUPPEL: You had a lot on your plate when you spoke with Michael Hickerson in 2012. What are you up to now?</strong></p>

<p><strong>JIMMY LIN</strong>: Currently I’m on faculty at Washington University at St. Louis, where I am a research instructor in the pathology department. Also, a year and a half ago, I founded the <a href="http://www.raregenomics.org/">Rare Genomics Institute</a> (RGI)—a nonprofit that helps find cures for people with rare diseases.</p>

<p><strong>ER: What qualifies as a “rare disease”?</strong></p>

<p><strong>JL:</strong> These are diseases like cystic fibrosis and Huntingdon’s disease—diseases that affect less than 200,000 Americans each year. There are over 7000 different rare diseases, and less than 5% of them have any therapy. Altogether, they affect about 25-30 million people.</p>

<p>This creates what we call a “long tail problem”—it’s hard for a top-down research system to create research programs for all 7000 rare diseases. So instead, we are creating a bottom-up platform from which the patients themselves can create research projects and help fund them. We connect patients with physicians and researchers, customize a research program with top medical universities, design the experiment, and then use an online fundraising platform to fund the study through [mostly] friends and family of the patient.</p>

<p>Basically, we create a “foundation in a box.” By partnering with the Rare Genomics Institute, patients and their friends and families who want to study rare diseases don’t have to go through the hoops of creating their own nonprofit or lab—we do that for them. So, instead of creating 7000 different nonprofits, we create a generalized platform from which studies can be conducted.</p>

<p><strong>ER: Who qualifies for care through the Rare Genomics Institute?</strong></p>

<p><strong>JL:</strong> Anyone with a rare disease can come to us. The main thing we’re doing right now is diagnosis. When families come to us, they either don’t know the disease that’s affecting them or their child, or they don’t know the gene that’s wrong.</p>

<p>For instance, if a child had a condition that doctors couldn’t identify, his or her parents might come to us for help. What we’d do then is sequence the genes of the mother, father, and child, and compare them to reference genome to determine what mutations each of the parents have. Depending on what the disease is and what the gene causing it is, we can filter out mutations that don’t mean anything using the parents’ genomes—then, after filtering, we can potentially pinpoint the genes that fit the genetic pattern of the disease. This is the first step.</p>

<p>After that, we are building infrastructure to determine the effect of these changes and a way to help. For example, after looking at the literature, we can perhaps design experiments using cells extracted from the patient; this part of the process is different for every disease. Then, if we can determine that there is, for instance, a pathway missing a specific enzyme, we can try using drugs, a bone marrow transplant, or gene therapy to try to put healthy cells into the child… But there’s a variety of diseases, of course, so there’s a variety of different approaches—and we’re just starting to explore these aspects.</p>

<p><strong>ER: How did RGI get started?</strong></p>

<p><strong>JL:</strong> It really started when I was in medical school at Johns Hopkins—there was this boy that came to our clinic to be seen. My research was in cancer genome sequencing, and the family had come to our department looking for answers about what was wrong with their son. At that point, the family was almost hopeless—they had gone to so many doctors, run so many tests—I decided I wanted to try to help children like this. That’s when my friends and I decided to start the Rare Genomics Institute.</p>

<p>Currently, there are about 50 researchers associated with the organization, and we are all volunteers. It’s growing much, much faster and been more amazing than we’ve ever imagined—we’re already making an impact. In May of last year, we were able to discover a new disease using the world’s first crowd-sourced, crowd-funded genome. Working with researchers at Yale, we delineated a disease of which our patient was the first identified.</p>

<p>Right now, we’re in the middle of raising funding and hiring staff to make this organization one that is self-sustaining, and to increase its impact even more.</p>

<h3>Excerpts from Michael Hickerson Interview</h3>

<p><strong>MH: …you call yourself a doxologist. What’s the full term you used in your Jubilee bio?</strong></p>

<p><strong>JL</strong>: Medical and scientific doxologist.</p>

<p><strong>MH: How did you decide on that term and what does it mean to you?</strong></p>

<p><strong>JL:</strong> I listen to a bunch of teaching by <a href="http://en.wikipedia.org/wiki/J._I._Packer">J.I. Packer</a>&nbsp;, who teaches theology at Regent College and is one of the leading thinkers on these things. Interestingly, before any one of his classes, he says “Theology is for doxology,” and then the whole class sings the Doxology together out loud in class. I thought, “Wow, that is so great,” because everybody sometimes learns theology just for intellectual things [instead of for worship].</p>

<p>That’s not just true for theology, it’s for everything: biology is for doxology; chemistry is for doxology. That’s when I started to think, I should consider myself, first and foremost, as a person who praises God in what I do. And then no longer make “Christian” the adjective, right? “Doxologist” is the noun. But then what kind of doxologist am I? So I call myself a medical and scientist doxologist. I would call someone, for example, in the marketplace, a business doxologist. Or, someone who does art, an artistic doxologist. To really have the noun as our identity, and then our vocation as just a descriptor of how we do that.</p>

<p><strong>MH: That’s a great point. A noun is always stronger than the adjective. So, you want that to be the focus, rather than the add-on.</strong></p>

<p><strong>JL:</strong> In our current culture, we’re defined by our jobs. It’s <em>having</em> a vocation. I wanted to shift away from that. I didn’t want to be a doctor first and foremost, or a scientist, but one who praises God. And evidently, within science you don’t want to call yourself a Christian Scientist. That’s another religion, so . . .</p>

<p><strong>MH: [laughs] That’s right. I run into that, as well, when I’m teaching or talking about science to Christians. You always run into that stumbling block.</strong></p>

<p><strong>JL: </strong>With “scientific doxologist,” people don’t confuse them. You do have to explain what it means. And that gets in a little story actually, on what it means about vocation. It’s a small lesson — a teaching point when you do talk to people about vocation and calling. That’s why I use it.</p>

<p><strong>MH: I guess my final question would be what spiritual practices help sustain you? What helps you stay in contact with God and keep a good foundation?</strong></p>

<p><strong>JL:</strong> First, I am interested in many, many different things. I sort of mix it up in terms of spiritual practices. Besides the fundamentals, of course, of quiet time, devotional reading, and scriptural reading, I do theological study because I have to do that academically. I find a lot of time with God through the spiritual disciplines, such as times of solitude — which is very interesting for someone who is in academics to no longer think about ideas but just to be quiet before God — how silence, time to think by yourself, or sitting in silence is also something you should foster.</p>

<p>In terms of spiritual formation, what you really need is definitely a good community of people. I have a very supportive community at my church. I’m the deacon of devotions, so that of course keeps me on track. It encourages me as I, in my own spiritual walk, encourage other people. Fundamentally, I think for all Christians, whether you are academic or no matter your vocation or calling, being in the Word and prayer are the most important things. Doing that and being spiritually fed is what is important.</p>
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        <pubDate>Mon, 25 Mar 13 08:33:45 -0700</pubDate>
        <dc:creator>Jimmy Lin, Ruppel, Emily</dc:creator>
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        <title>Genes, Cells, and the Changing Face of Technology, Part 1</title>
        <link>http://biologos.org/blog/genes&#45;bacteria&#45;and&#45;the&#45;changing&#45;face&#45;of&#45;technology&#45;part&#45;1?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/genes&#45;bacteria&#45;and&#45;the&#45;changing&#45;face&#45;of&#45;technology&#45;part&#45;1?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Right on this tabletop, you could make materials that by current manufacturing processes would otherwise cause a great amount of environmental hazard … In 50 years, we should be able to do things in ways we don’t do them now, that will be cheaper, less toxic, less polluting, more efficient, and so forth…</description>
        <content:encoded><![CDATA[<p><strong>EMILY RUPPEL: You’ve said that as technology in the 20th century was influenced by chemistry and physics, in the 21st century, it’s going to be influenced by biology. Can you give us a sense of what that future might look like?</strong></p>

<p><strong>DOUG LAUFFENBURGER</strong>: It could look like a lot of things. One way to envision what I mean is to put yourself back a hundred years. For instance, in 1913, an electronic computer was unimaginable. But using physics, quantum physics, leading to semiconductors and devices like that, people figured out over the next 20 to 30 years how you could build a machine to do calculations and so forth. And then, of course, all sorts of thing happened…</p>

<p>We’re roughly at that stage with biology, even though it seems like things are more imaginable because—and we don’t have to go strictly century by century here—because we can already guess the way some things might change, whereas in 1913 there was no inkling, really, as to what would happen in the computer revolution.</p>

<p>So, to enumerate some of the things that are conceivable—let’s just start with computers, because we were just there.</p>

<p>There’s a notion that computers get faster and cheaper by making their logic gates smaller, and how you improve a design with physics keeps bumping up against how you make these little units smaller. Well, using biology, the solution seems self-evident—you just line up the pieces of DNA, and if you put the right pieces of DNA in the right places, the resulting parts are so much smaller than the things we can do with physics. You can imagine, even though it’s just a theory now, computers continuing to become many times smaller and cheaper—and be made via environmentally benign manufacturing processes—through biomolecular construction.</p>

<p>Now that’s exciting from one point of view, but from another, it’s not that revolutionary, because you’re just using DNA as a piece of physics. It’s not really biology—it’s merely a biological molecule being used to make better physics.</p>

<p>For a different example, if you think about the way we make things, the way we manufacture plastics, gasoline, energy—we have to do all that using chemistry, and to make that chemistry happen, we have to input a lot of energy—in fact, one of the most costly industries in terms of energy usage <em>is</em> the energy industry. You have to put in so much energy to refine petroleum and things like that. And to make plastics, ceramics—things of that nature—is also very energy intensive, and it’s also where a lot of pollution comes from, because you’re mixing together all these chemicals that really didn’t want to be mixed together. You get what you want, but you get a lot of byproducts, toxins, etc.</p>

<p>Well, people have started to realize that a lot of this work can be redone through the use of biology. You can turn corn into fuel or plastic, and you can make magnetic or electrical storage devices out of biological units (viruses can pattern the crystals, so instead of using mixtures of toxic chemicals, you just pull the viruses with the right properties together). Right on this tabletop, you could make materials that by current manufacturing processes would otherwise cause a great amount of environmental hazard.</p>

<p>As for another exciting development—well, to preface, one of the problematic things about modern agriculture is the necessity of using fertilizers (there are insecticides to be concerned about, too), but fertilizer manufacturing is terrible for the environment. You have to make fertilizer out of ammonia and that’s a horribly polluting and energy-intensive manufacturing process. What you could potentially do, instead, is program into bacteria the genes that take nitrogen out of air, turning it into organic nitrogen then just scatter the bacteria onto the field—and you wouldn’t need to <em>make</em> ammonium using the current very caustic processes.</p>

<p>These are the sorts of things I mean—and we haven’t even touched on medicine, yet. People tend to think about medicinal advances, first, but before you even get to medicine, you can think about energy, manufacturing, materials, and agriculture. In 50 years, we should be able to do things in ways we don’t do them now, that will be cheaper, less toxic, less polluting, more efficient, and so forth.</p>

<p><strong>ER: A lot of people are nervous about the idea of “programming” life. Can you respond to this fear as a Christian?</strong></p>

<p><strong>DL</strong>: As a Christian, I would say that God gave humankind dominion over the earth, to do good things—he gave us minds, a passion for understanding how things work, and then he put in this world all these fascinating processes, which, if we figured them out, we could do good things, could feed more people—could feed more people without causing extensive damage to the environment. And cure disease and injury. And the list goes on. I think all that is good, and that God would be pleased that we would be using His creation to live better—I’m not saying more luxuriously, but more happily, contentedly, with each other.</p>

<p><strong>ER: But back to the topic—advances using biology in the next century. You had just mentioned medicine…</strong></p>

<p><strong>DL</strong>: So, yes, there’s also medicine. Now, obviously, in thinking about this, the use of stem cells comes to immediately the fore. There are a lot of diseases out there that you really <em>do</em> need to correct using cellular processes. Right now, we try to make these corrections through chemistry. For instance, we give you a pill, and that pill should interfere with something that’s going wrong in your body—and yet it’s really never adequate to just <em>interfere</em> with something that goes wrong in the body, because you don’t really set it right just by getting in the way of it.</p>

<p>The opportunity with stem cells is that you can say, “I’ll replace the cells in the body that are doing something wrong with cells that are actually doing it right again.” If you program cells to be neurons, heart cells, or bone cells, you can <em>regenerate</em> properly functioning physiology. Rather than, say, replacing a hip with a metal part, you could regenerate the bone, itself, or you could regenerate neurons in Alzheimer’s patients. Never in the past has medicine been able to regenerate a proper physiology; it’s only tried to replace it with an inadequate surrogate, or minimize how much damage a disease is doing. With the use of stem cells, you can actually imagine returning the body to its proper physiology.</p>

<p>A different use of stem cells is to generate human tissue in the laboratory for better studies of human physiology and pathology and improved testing of drug effectiveness and toxicity.&nbsp; This will be a major advance over animal models, because of the significant disparities between animal physiology and human physiology.</p>

<p>A key point to emphasize is that there are different kinds of stem cells, which involve big differences in potential concerns. For Christians, clearly, stem cells derived from embryos present a tremendous ethical issue. Fortunately, a good proportion of stem cell technologies can be pursued using stem cells from adult tissue. These cells can be stimulated to develop into certain tissue-specific physiological behavior, or can now even be “re-programmed” to become quite similar to the more broadly flexible stem cells derived from embryos but now not requiring the embryonic source. Happily, the days of reliance on embryo-derived stem cells appear to be over for purposes of beneficial technologies.</p>

<p>We also should consider genomic medicine, and what’s attractive about that field is that with the way we do medicine now, which is chemistry-based—say you have a disease, and we might give you a pill to correct it—well, the biggest problem with that is that while I think this pill will help ameliorate your condition, maybe it won’t. Maybe that drug only works in ten percent of the patients and not ninety percent.</p>

<p>For example, consider cancer. You’ve got a particular kind of cancer, and we prescribe a certain treatment… well, <em>hopefully</em> you’re among the lucky ten percent, and you’ll be in much better shape in two or three years. If you’re not, then we’ve wasted your time. In fact, we’ve probably hurt you rather than helped you, because we’re using chemistry to interfere with things, and even though we might be reducing the damage of some things, we’re probably causing toxicity elsewhere in the system, because that same chemistry is also interfering over there.</p>

<p>So the value of genomic medicine is to get enough information about you through sequencing your genome that we can say, “Ah, for you this particular pill is not a good idea; it will actually do more damage than good. But for your brother, it’s likely to work, and the ratio of benefit to harm is much better.” This is the reason genomic medicine is more imminent—it’s what’s closest on the horizon to being realized—because we can use the same drugs we have now, we’ll just be using them more effectively. At the moment, we can sequence genomes, and we do have these treatments that help, and it’s just a matter of matching up these two technologies.</p>

<p>Now, on the other hand, when you think about genome sequencing, you can find out all sorts of things, and you have to decide, “What if I learn something negative?”</p>

<p><strong>EDITOR’S NOTE</strong>: Join us next week as we continue the conversation about genomic medicine, bioengineering, and being a Christian in science.</p>
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        <pubDate>Tue, 12 Mar 13 08:00:34 -0700</pubDate>
        <dc:creator>Doug Lauffenburger, Ruppel, Emily</dc:creator>
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        <title>Evolution and Christian Faith Grantees Announced</title>
        <link>http://biologos.org/blog/evolution&#45;and&#45;christian&#45;faith&#45;grantees&#45;announced?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/evolution&#45;and&#45;christian&#45;faith&#45;grantees&#45;announced?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Congratulations to the 37 winners of the Evolution &amp; Christian Faith (ECF) grants competition! ECF is a new BioLogos program designed to support projects and network&#45;building among scholars, church leaders, and parachurch organizations.</description>
        <content:encoded><![CDATA[<p>Congratulations to the 37 winners of the Evolution &amp; Christian Faith (ECF) grants competition!&nbsp; ECF is a new BioLogos program designed to support projects and network-building among scholars, church leaders, and parachurch organizations. Each project takes a different approach to address theological and philosophical questions commonly voiced by Christians about evolutionary creation. ECF places a premium on scholarship with high “translational” potential—that which leaves the academy and makes an impact on the church. The program runs through August 2015.</p>

<p>Grantees will benefit from in-person interaction through a series of summer workshops in 2013, 2014, and 2015. These meetings will not only foster a broader knowledge base, but will build a sustained network of scholars and church leaders, both young and seasoned, who are serious about addressing the concerns of the church about evolution. Also in 2015, in connection with the third summer workshop, BioLogos will host a large conference open to scientists, scholars, and church leaders from around the world.</p>

<h3>ECF History</h3>

<p>In January 2012, BioLogos was awarded a multi-million dollar grant from the John Templeton Foundation to fund the work of scholars and church leaders on evolution and Christian faith. In spring 2012 we worked hard to get the word out. You may have seen announcements on the BioLogos website, in our newsletters, on the Books &amp; Culture, Leadership Journal, or First Things websites, on your professional society’s listserv, or perhaps on your friend’s blog.</p>

<p>The response was overwhelming: we received 225 letters of intent for a total request of $21 million—about seven times the amount we had to offer. We needed to invite the most promising applicants to submit a full proposal, but recognizing the projects with highest potential would require broad expertise. From the beginning, we envisioned that a panel of scientists, pastors, and scholars would oversee the application and review process as well as play key advisory roles throughout the project. A team of eight highly qualified individuals came on board in the early months of the project. They reviewed each proposal and together recommended that BioLogos invite 86 applicants to submit full applications.</p>

<p>The deadline for submissions was October 1, 2012. As in the previous round, the ECF panel evaluated each proposal. In addition, we asked 55 other experts to participate, so that each proposal received 3-4 scores. Criteria for the decision included significance of topic, project design, creativity and innovation, long-term impact potential, feasibility, and budget.</p>

<p>The panel then met together November 29-30, 2012, to make the final funding decisions. In the end, they recommended that BioLogos give 37 awards, ranging from $23,000 to $300,000. BioLogos staff notified applicants of their awards on December 14, 2013.</p>

<h3>The Grantees</h3>

<p>As part of our objective to create a network of scholars and leaders, we awarded grants to organizations across the U.S. and the world. Thirty of the 37 grantees are domestic; seven are international, hailing from Canada, France, Great Britain, Netherlands, and Spain.</p>

<p>Two-thirds of the accepted projects will be led by teams—some with three or more Project Leaders. We expect that the teamwork and time spent together at our summer workshops will be the start of a long-lasting network of people dedicated to helping the church think carefully about origins.</p>

<p>Applicants chose to apply under one of three program tracks: interdisciplinary scholarship (Track 1), intra-disciplinary scholarship (Track 2), and translational projects (Track 3). Track 1 projects focus on both the collaboration between individuals in different disciplines and the development of projects at the interface of different content areas. Track 2 projects focus on work done within a specific discipline. Track 3 focuses on projects that encourage Christians, especially those within more conservative traditions, to engage in meaningful and productive dialogue to reduce tensions between mainstream science and the Christian faith. The numbers of grantees in Tracks 1, 2, and 3 are 6, 8, and 23, respectively.</p>

<p>Many of the scholarly projects tackle questions about Adam and Eve, the Fall, human identity, and Original Sin—some of the most critical interpretive issues for evangelical theology.&nbsp; Some examples:&nbsp;</p>

<ul>
<li><p>Theologian Oliver Crisp of Fuller Seminary will take an analytic theology approach to ask to what extent a theological account of the origin of human sin depends upon the evolution of modern humans from one and only one ancestral pair—especially if that pair does not appear to correspond to what we would think of as modern human beings.&nbsp;</p>
</li>
<li><p>Pastor Michael Gulker and philosopher James Smith, leading a large team from The Colossian Forum, ask a related question: if humanity emerged from non-human primates—as genetic, biological, and archaeological evidence seems to suggest—then what are the implications for Christian theology’s traditional account of origins, including both the origin of humanity and the origin of sin?&nbsp;</p>
</li>
<li><p>Biologist Dennis Venema of Trinity Western University and New Testament scholar Scot McKnight of Northern Seminary will write a book on the evidence for evolution and population genetics, with informed theological reflection on how these issues interact with orthodox Christianity.</p>
</li>
<li><p>Biologist David Wilcox of Eastern University will develop an updated model of human identity which reflects the complex recent scientific advances in genetics and paleoanthropology and yet is sensitive to theological concerns.&nbsp;&nbsp;</p>
</li>
</ul>

<p>These are just a few of the scholarly awards; check out the <a href="/ecf/grantees">Grantees page</a> for full descriptions of all Track 1 and Track 2 projects.</p>

<p>All projects have translational potential, but Track 3 projects are designed to meet the needs of a particular constituency within the evangelical church. These projects run the gamut from ethics to education to media production to ministry resources. &nbsp;Some examples include:</p>

<ul>
<li><p>Theologian Lee Camp of Lipscomb University will produce “The Questions in Monkey Town,” an episode of Tokens, a live variety show that features musical performances, comedic sketches, brief interpretive monologues, and dialog with authors and scholars. The episode will be performed and filmed on the site of the famous Scopes Trial in Dayton, Tennessee.</p>
</li>
<li><p>Chaplain Joshua Hayashi and Educator Diane Sweeney of the Punahou School in Hawaii will lead a team to produce multimedia curricula aimed at helping high school students connect with their biology curricula and, at the same time, deepen their Christian faith.</p>
</li>
<li><p>Physics teacher and pastor Benoît Hébert of Science et Foi Chrétienne in France will lead an international, multi-denominational team of French speaking Evangelical scientists, pastors and church leaders to produce a large number of resources on evolutionary creation.</p>
</li>
<li><p>Pastor Seung-Hwan Kim of Grace Truth Community Church, a Southern Baptist church in Cambridge, Massachusetts, will produce teaching and preaching materials about evolution for church leaders.</p>
</li>
<li><p>President Gregory Wolfe and Director of Resource Development for IMAGE will gather artists and writers of faith whose work explores the dialogue between evolutionary science and faith practice, convening a conversation between them and scientists, theologians, and church leaders in private and public conferences.</p>
</li>
</ul>

<p>Again, this is just a taste of the diversity of Track 3 projects. Read more about each project on the <a href="/ecf/grantees">Grantees page</a>. You can look forward to an incredible variety of resources coming out of the ECF program, many of which will be featured right here on the BioLogos Forum.</p>
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        <pubDate>Wed, 13 Feb 13 05:25:03 -0800</pubDate>
        <dc:creator>Kathryn Applegate</dc:creator>
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        <title>Dissonance and Harmony</title>
        <link>http://biologos.org/blog/dissonance&#45;and&#45;harmony?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/dissonance&#45;and&#45;harmony?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>People hold clearly discordant points of view, and it would be dishonest to ignore the conflict. Yet some voices emphasize the dissonance without any note of harmony to put it in context. Too often, science and faith becomes a hostile battle of worldviews, sounding angry, dissonant chords even among fellow Christians. But civil, gracious dialogue is possible.</description>
        <content:encoded><![CDATA[<p>As soon as my older brother began piano lessons, I begged to play the piano too. My parents decided to let me try, which led to cute pictures of a 4-year-old climbing up onto the piano bench at her first recital. Like all young students, I started with scales and simple pieces, but over the years, my love for music deepened and matured. My piano teachers showed me that a beautiful concluding chord was often preceded by a dissonant clash. Dissonances sound harsh by themselves, but without them, music would sound boring and trite. If I rushed past the dissonance, the final resolution was not as beautiful. Instead, I learned to pause on the dissonant notes, to carefully place them in the context of the surrounding harmonious chords. The dissonance and harmony together formed more beautiful music than either alone.</p>

<p>Conversations about science and faith can be like that. People hold clearly discordant points of view, and it would be dishonest to ignore the conflict. Yet some voices emphasize the dissonance without any note of harmony to put it in context. Too often, science and faith becomes a hostile battle of worldviews, sounding angry, dissonant chords even among fellow Christians. But civil, gracious dialogue is possible. On the BioLogos Forum, we invite authors from a range of positions, including some that don't agree with all our <a href="/about">beliefs</a>, but we strive to set these dialogues in a context of respect and civility. When authors are fellow Christians, we don’t shy away from disagreements, but remember the broader context of our unity as fellow believers, the harmony that binds us together.</p>

<p>My own story is more harmonious than dissonant. My interest in music was paralleled by my interest in math and science and my involvement in church. My family and teachers encouraged my interests in science, and I remember how fun it was to play math games with my dad and brother. And every week we were in church: twice on Sunday, plus Wednesday night club, youth group activities, and Bible quizzing. While my church accepted the young earth position, they didn’t emphasize it, and I was never told that a particular science view was essential to being a Christian. When I encountered the evidence for the age of the universe and the evolution of life, I also found Christian authors who showed me how this scientific evidence could fit with Christian beliefs.</p>

<p>But others have experienced more dissonance. Nearly four years ago, Dr. Francis Collins launched this website with the story of a young university student in the midst of a profound personal crisis, what Dr. Collins called “a wrenching crisis of worldviews shaking her deepest foundations.” Without a context of harmony, too many people – young and old – feel they have to choose between two incompatible positions, either Christian faith or the findings of science. BioLogos exists to show another way. We hold fast to the authority of the Bible and the core beliefs of Christianity, and at the same time, accept the rigorous conclusions of mainstream science.</p>

<p>It is with these chords of dissonance and resolution in mind that I come to this opportunity to lead BioLogos. I have long sensed God’s calling to serve the church as part of this dialogue. Some of you know of me from a book I wrote in 2007 with my husband Loren, called <em>Origins</em>. I’ve been speaking and writing on science and faith for many years, but I did this around the edges of my primary career of teaching and research in astronomy. While I thoroughly enjoy teaching students and doing research, over the last year I have recognized God’s hand in leading me to shift my fulltime work to the science and faith dialogue. Now I’m looking forward to using and developing my gifts in service of BioLogos.</p>

<p>Joining me as a new member of the leadership team is Dr. Jeff Schloss, who will serve as our Senior Scholar. Many of you are already familiar with his work, and know he brings not only a strong track record of scholarship in evolution and philosophy, but tremendous skill in communicating to lay audiences. Jeff and I share a deep commitment to the unity of the body of Christ and a desire to remove barriers for people to come to Christ. I am delighted to have him on board.</p>

<p>Jeff and I inherit a strong and vibrant organization from our outgoing President, Dr. Darrel Falk. Darrel brought his deep love and concern for the church, along with his considerable creativity and hard work, to this effort. We plan to continue and build on the excellent programs he established.</p>

<p>One of the pleasures of my first few weeks on the job has been getting to know the BioLogos staff. Kathryn, Lisa, Stephen, Mike, Laura J, and LeAnne each bring key skills to the organization, as well as energy and a passion for the mission of BioLogos. The team keeps BioLogos functioning behind the scenes, from finances to computer programming to event planning. Two team members, Mark Sprinkle and Tom Burnett, have decided to move on to other opportunities after a year of dedicated service to BioLogos. As web editors, Mark and Tom revamped the blog, making it a forum for rich scholarly dialogue and vibrant testimonies, and drawing in new authors to write on a great mix of topics. They also organized the archived material, so that the best of BioLogos is readily accessible. We wish them well in their new endeavors. Joining the BioLogos team is Emily Ruppel as Interim Web Editor. You may know Emily from her work to develop and edit the e-zine God &amp; Nature for the American Scientific Affiliation; she will join us part time at BioLogos while she continues to work with ASA.</p>

<p>We believe God has great things in store for BioLogos. We will continue to focus on connecting with scholars, pastors, teachers, and lay people, but in the months ahead, we will also be sharpening our vision and engaging afresh in strategic planning. We’ll be considering new audiences, new programs, and new priorities. I invite your comments below on directions you’d like to see BioLogos take.</p>

<p>In just a few years, this organization has impacted the lives of thousands of Christians and brought an important voice to discussions taking place within the church. Thanks to the strong support from The John Templeton Foundation and many other generous donors, the vision of Francis Collins is thriving. BioLogos is on the cusp of enormous opportunities and huge potential. While transitions are times of risk and vulnerability, they are also times of great opportunity. My prayer is that God will give us wisdom and guidance to be good stewards of this opportunity. May God continue to use BioLogos to bring harmony to a conversation that has emphasized dissonance for far too long.</p>
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        <pubDate>Wed, 30 Jan 13 07:00:34 -0800</pubDate>
        <dc:creator>Deborah Haarsma</dc:creator>
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        <title>New Leadership for The BioLogos Foundation</title>
        <link>http://biologos.org/blog/new&#45;leadership&#45;for&#45;the&#45;biologos&#45;foundation?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/new&#45;leadership&#45;for&#45;the&#45;biologos&#45;foundation?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>With great pleasure, the Board of Directors of The BioLogos Foundation announces the appointment of Deborah Haarsma to become our next President, and of Jeffrey Schloss to the role of Senior Scholar.  Professor Haarsma assumes leadership from our outgoing President Darrel Falk, to whom we owe a tremendous debt of gratitude.</description>
        <content:encoded><![CDATA[<p>With great pleasure, the Board of Directors of The BioLogos Foundation announces the appointment of Deborah Haarsma to become our next President, and of Jeffrey Schloss to the role of Senior Scholar. Professor Haarsma assumes leadership from our outgoing President Darrel Falk, to whom we owe a tremendous debt of gratitude.</p>

<p>As a Board, our transition process has focused on selecting leaders who embrace Christ as Savior and science as the pursuit of understanding God’s work in His creation. Both Haarsma and Schloss have demonstrated their commitment to these two fundamental principals in their scholarship as well as in their lives.</p>

<h3>President Deborah Haarsma, Ph.D.</h3>

<p>Dr. Deborah Haarsma is Professor of Physics &amp; Astronomy at Calvin College in Grand Rapids, Michigan. In recent years she has become well known to the BioLogos community as a regular contributor and consultant to our blog and Questions section, as well as an active member of the Board of Advisors. Dr. Haarsma’s deep commitment to her faith and enthusiasm for science have made her a popular public speaker in churches as well as private Christian schools and universities.</p>

<p>A graduate of Bethel University in St. Paul, Minnesota, Dr. Haarsma earned her Ph.D. in astrophysics from the Massachusetts Institute of Technology. An experienced research scientist, her work on galaxy clusters and gravitational lenses has been published in <em>The Astrophysical Journal</em> and <em>The Astronomical Journal.</em></p>

<p>Dr. Haarsma grew up in a Christian home and an evangelical church. Since her college days, she has felt God’s call to be an ambassador: to share Christ’s love in the academic world of science, and to share the wonders of God’s creation with the church. Her first book, <em><a href="http://www.amazon.com/gp/product/159255573X/ref=as_li_ss_tl?ie=UTF8&amp;camp=1789&amp;creative=390957&amp;creativeASIN=159255573X&amp;linkCode=as2&amp;tag=thebiofou06-20">Origins: Christian Perspectives on Creation, Evolution, and Intelligent Design</a><img alt="" border="0" height="1" src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&amp;l=as2&amp;o=1&amp;a=159255573X" style="border:none !important; margin:0px !important;" width="1" /></em>, was coauthored with husband, Dr. Loren Haarsma, a biophysicist. Origins respectfully explores the range of views held by Christians on creation, evolution, and human origins and is used in many Christian schools and colleges to navigate these complex issues. Haarsma’s latest book, <em><a href="http://www.amazon.com/gp/product/061559039X/ref=as_li_ss_tl?ie=UTF8&amp;camp=1789&amp;creative=390957&amp;creativeASIN=061559039X&amp;linkCode=as2&amp;tag=thebiofou06-20">Delight in Creation: Scientists Share Their Work with the Church</a><img alt="" border="0" height="1" src="http://www.assoc-amazon.com/e/ir?t=thebiofou06-20&amp;l=as2&amp;o=1&amp;a=061559039X" style="border:none !important; margin:0px !important;" width="1" /></em>, co-edited with Rev. Scott Hoezee, invites Christians to explore the discoveries of science through essays by Christian biologists, astronomers, mathematicians, and other scientists.</p>

<p>A gifted musician, Dr. Haarsma is active in her local church, playing piano for the choir and worship services. In a recent article, Dr. Haarsma shared how her own worship of God as creator has been intensified by her scholarship in science, saying “I have learned to praise God for the glory of the systems he has put in place. Rather than picturing God making each mountain individually, I praise him for carefully designing a whole system of continental plates that slowly but powerfully raised up the snowy heights of the Himalayas. Rather than picturing God creating each individual flower, I praise him for designing the system of evolution to create an extravagant variety of flowers of all shapes, colors, and scents. A scientific explanation does not replace God; rather, it is our best human description of the natural mechanisms God uses. This understanding can actually increase our awe and worship, giving us a glimpse into how God works.”</p>

<p>Dr. Haarsma is grateful for this opportunity to lead BioLogos in its work to draw pastors, teachers, scholars, and students into the expanding conversation about evolution and its compatibility with biblical faith.</p>

<hr />
<blockquote>Deb Haarsma is not only a scientist but an active participant in the church and a devoted follower of Christ. I could not be more excited about her leadership from my perspective as a pastor. She deeply cares for the faith community that she is trying to equip with the knowledge of God's creation, so that we will all be able to glorify Him more completely.</blockquote>

<p style="text-align:right;"><strong>Joel Hunter<br />
Senior Pastor<br />
Northland Distributed Churches<br />
Florida</strong></p>

<hr /><h3>Senior Scholar Jeffrey Schloss Ph.D.</h3>

<p class="caption-left"><img alt="" height="375" src="http://biologos.org/uploads/static-content/j_schloss_announce.jpg" width="250" /></p>

<p>Dr. Jeffrey Schloss is Distinguished Professor and T.B. Walker Chair of Biology at Westmont College in Santa Barbara, California where he directs the Center for Faith, Ethics and Life Sciences. He is well known to the BioLogos community through his writings on evolution and faith for our blog, as well as his informative presentations at numerous BioLogos events.</p>

<p>Dr. Schloss is well respected in the academic community for his extensive work on evolutionary theory, ethics, and the Christian faith. He is a frequently invited speaker at scholarly conferences, has co-edited several academic volumes, and publishes in venues such as <em>Religion, Brain &amp; Behavior</em>, <em>Behavioral &amp; Brain Sciences</em>, and <em>Journal of Theology &amp; Science</em>. His many awards and honors include Oxford University’s Plumer Fellowship, the Crosson Fellowship in Philosophy of Religion at Notre Dame, and the Witherspoon Fellowship in Theology and Natural Sciences at Princeton’s Center of Theological Inquiry.</p>

<p>After a life-changing encounter with the gospel as a college drop-out, Schloss returned to school and graduated from Wheaton College. He went on to do post-baccalaureate fieldwork at the University of Virginia and the University of Michigan biological stations, completing his Ph.D. in Ecology &amp; Evolutionary Biology at Washington University in St. Louis, Missouri.</p>

<p>Since meeting Christ, Dr. Schloss’s life passion has been seeking to understand – and engaging others in their quest to understand – life through the revelation of scripture, the counsel of the Spirit, and the wisdom of science. Dr. Schloss has worked with Young Life and local high school ministries for many years. He speaks widely on Christian college campuses and at secular universities at Veritas, Intervarsity, and CRU (Campus Crusade) events. And he is grateful for the opportunity to teach and preach at his own and other churches. A mainstay of his life in Christ is a small group of long term friends in the faith, who hold him accountable and with whom he prayerfully considered the call to work with BioLogos.</p>

<p>Dr. Schloss is excited by the opportunity to build bridges of dialogue on the relationship between science and faith, in light of the invitation to “worship the Father in Spirit and in Truth.”</p>

<p>Dr. Schloss will hold a joint appointment with BioLogos and Westmont College.</p>

<hr />
<blockquote>The future of a great organization depends on the quality of its leaders, and the quality of its leaders is shaped by the courage to form a succession of leaders. BioLogos began with splendid leaders and it is time now to move to the next generation of leaders. I could not support more the appointment of Deborah Haarsma and Jeff Schloss, both able scientists, intelligent teachers, and exceptional communicators of the importance of science for the faith of ordinary Christians.”</blockquote>

<p style="text-align:right;"><strong>Scot McKnight<br />
Author of <em>Jesus Creed</em><br />
Professor of New Testament<br />
Northern Seminary</strong></p>

<hr /><h3>The Evolution of BioLogos</h3>

<p>It’s been a little more than four years since this project was launched by Dr. Francis Collins and a group of energetic graduate students. At the time, Dr. Collins’ book, <em>The Language of God</em> had resulted in a deluge of emails and letters from Christian students across the globe, inspired by Dr. Collins’ ability to combine his award-winning science with his deeply-experienced Christian faith. Those thought provoking questions combined with Dr. Collins’ desire to offer meaningful answers, provided the inspiration for our website.</p>

<p>Since that time, BioLogos has experienced tremendous growth in the numbers of fully committed followers of Christ who resonate with our efforts and have joined the conversation. Our website now includes over 1200 blog entries and receives nearly 2 thousand “hits” a day. Nearly a million people have visited our website since it’s launch and many of them have returned, for a total of over 2 million visits.</p>

<p>Our annual pastors conference continues to attract some of the most noted authors and leaders of our time. Our summer workshop for Christian teachers is considered a professional high point in the lives of many participants, and we recently awarded 37 grants to scholars and church leaders to advance the dialogue between evolution and Christian faith. We are humbled and grateful as we’ve seen God’s hand at work in all of these blessings.</p>

<p>Throughout this growth, we remain committed to exploring and celebrating the compatibility of evolutionary creation and biblical faith. As always, we are guided by the knowledge that all things are held together in Christ our Savior.</p>

<hr />
<blockquote>Many have called the 21st century the 'Century of Biology'. A key challenge for the Church in this century is not merely to integrate, but to celebrate, the intricacies and beauty of nature as part of robust Christian faith. The work of the BioLogos Foundation is and will continue to be crucially important in helping the Church to meet this challenge. The addition of Deb Haarsma and Jeff Schloss to an already impressive team is an exciting next step in BioLogos' continuing mission."</blockquote>

<p style="float:right;"><strong>Jeff Hardin Ph.D.<br />
Professor and Chair, Department of Zoology<br />
Director, Biology Core Curriculum<br />
University of Wisconsin</strong></p>

<p>&nbsp;</p>

<p style="clear:both;">&nbsp;</p>

<p>&nbsp;</p>
]]></content:encoded>
        <pubDate>Mon, 28 Jan 13 05:58:01 -0800</pubDate>
        <dc:creator></dc:creator>
        <!--<dc:date>Jan 28, 2013 05:58</dc:date>-->
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        <title>Series: Made in the Image of God: The Theological Implications of Human Genomics</title>
        <link>http://biologos.org/blog/series/made&#45;in&#45;the&#45;image&#45;of&#45;god&#45;the&#45;theological&#45;implications&#45;of&#45;human&#45;genomics?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/made&#45;in&#45;the&#45;image&#45;of&#45;god&#45;the&#45;theological&#45;implications&#45;of&#45;human&#45;genomics?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>This series by Denis Alexander reflects on advancements in genomics as well as their theological implications. He focuses on the relatedness of hominin genomes, arguing that this does not interfere with the image of God in humans. The image of God depends more on the capacity for relationship and covenant, not on a list of particular physical qualities. He then discusses why the recent studies of genomics provide “no grounds for genetic determinism.”</description>
        <content:encoded><![CDATA[<p class="intro">This post first appeared on <em><a href="http://www.huffingtonpost.com/dr-denis-alexander/made-in-the-image-of-god-_b_1182892.html" target="_blank">The Huffington Post</a></em>.</p>

<p>About a year ago I posted the <a href="/blog/made-in-the-image-of-god-the-theological-implications-of-human-genomics-1">first article in this series</a>, asking whether recent advances in genomics made any difference to the Judeo-Christian notion of humanity being made in the 'image of God'. That article focused on DNA sequencing data from our closest relatives. This article will focus on the issue of genetic determinism.</p>

<p>Theologians have spent many centuries mining the rich vein of the 'image of God' metaphor. Central to the idea is humanity with spiritual capabilities and responsibilities, equipped for moral decision-making and a relationally rich life in community. Historically, the idea has contributed to the conviction that each human individual has an absolute value, independent of their ethnicity, educational level, health status or income.</p>

<p>Do recent advances in genomics threaten or support such a view of humankind, or are they just neutral? Irrespective of one's belief in God, or not, this is of more than passing interest. Imagine the poor person wrestling for years with the great questions of life and finally deciding to become an atheist, only to then be informed that a cognitive bias derived from his particular set of genetic variants made that decision pretty much inevitable anyway. Such news might be equally unsettling for the person who had just struggled to faith following years of agnosticism. Our deepest human feelings are closely connected with the idea that we choose our own path through life.</p>

<p>The flourishing of genomics in the early part of the 21st century has certainly conveyed the message to many that one's destiny is written into one's genome. Whereas scientists are generally scrupulously careful not to give the impression that there is any such entity as a "gene for" some human trait, by the time the latest discovery appears in the media, such caution is often thrown to the winds. The past year has seen the trumpeting of a <a href="http://www.newscientist.com/article/dn20451-teen-survey-reveals-gene-for-happiness.html" target="_blank">"gene for happiness,"</a> a <a href="http://www.huffingtonpost.com/2011/11/15/kindness-genes-caring-trustworthiness_n_1093483.html" target="_blank">"kindness gene"</a> and a "believer gene." It is not even a question of education, but "genes are to decide" if you are a "caring person." <a href="http://www.decodeme.com/" target="_blank">Genetic testing websites</a> assure us that "your genes are a road-map to better health," and we all know that road-maps are fixed. Small wonder that there is a creeping genetic fatalism around that subverts the idea of personal responsibility.</p>

<p>Fatalism in itself impacts on human behavior. Studies have shown that subjects exposed to the writings of authority figures doubting free-will are then more likely to cheat. Conversely, workers convinced of the reality of free-will are rated higher in the work-place than those whose beliefs tend more towards determinism.</p>

<p>The reality is that recent genetics research has continued to move steadily away from any notion of genetic fatalism, highlighting the sheer complexity of the genome, and providing some fascinating examples of the ways in which our choices impact upon our own genomes. There is no gene "for" any complex human trait because in fact genes encode proteins or other types of information-containing molecules, and thousands of genes collaborate together during human development in interaction with the environment to generate the unique human individual that each person represents. Those requiring an introduction for the non-specialist are referred to <a href="http://www.amazon.com/Language-Genetics-Introduction-Templeton-Religion/dp/1599473437/ref=sr_1_2?s=books&ie=UTF8&qid=1325614584&sr=1-2" target="_blank">"The Language of Genetics."</a></p>

<p>Epigenetics adds further layers of variation and complexity. This refers to the chemical modifications of the DNA that cause genes to be switched on or off. It is such epigenetic modifications that generate the 220 specialized tissues of our bodies. Such acquired changes can even be inherited across several generations, certainly in plants and animals, and maybe in humans as well. In choosing to smoke, drink in excess, or take drugs, we also choose to modify our genomes.</p>

<p>So it turns out that even identical twins are not really genetically identical, developing different profiles of epigenetic modification as they go through life. This no doubt contributes to the otherwise surprising result that the age of death of identical twins, who share identical genomes, is comparable with that observed in non-identical twins, whose genomes are as different from each other as any two sibs. In one study of 184 pairs of twins in Spain, the difference in the age of death between the identical twin pairs was seven years on average, but such averages hide the fact that the age differences ranged from a couple of weeks to eighteen years. In the case of the non-identical twins, the difference in age at time of death was nine years, and the range was three to nineteen years. So there was really not that much in it.</p>

<p>What would happen if there was a genetic marker that identified nearly everyone in prison, marking them out as genetically distinct from half the world's population? What would that do to our ideas about genetic fatalism and convictions about moral responsibility? As it happens that marker already exists. Out of 131 countries worldwide, <a href="http://www.nationmaster.com/graph/cri_pri_fem-crime-prisoners-female&int=-1" target="_blank">an average of 96 percent of the prisoners are male</a> and, in this case, no complicated genetic studies are needed to know that the genetic marker that identifies this population is the Y chromosome. So universal is the correlation between the Y chromosome and criminality that we can safely say that no other genetic correlation will ever be found between a variant genome and criminality that surpasses this one. And yet we still hold nearly all males responsible for their criminal actions and put them in jail as soon as they're convicted. Furthermore, we note that most people who possess a Y chromosome go through life without committing a crime. So having a Y chromosome, with its unique set of genes, does not "determine" human criminality, although clearly we cannot go to the opposite extreme and say that it is completely irrelevant for patterns of human behavior.</p>

<p>The point in citing such examples is not to suggest that our genomes have nothing to do with our lives. They certainly do, not least in their significant contributions to our personality differences. The point rather is that the latest results in genetics provide no grounds for fatalism, instead highlighting the richness and diversity of the human population, and our own moral responsibilities, including the challenge to be good stewards of our genomes.</p>

<p>An argument for the existence of God this is not. But for those of us whose world-view is shaped by the conviction that we humanity are made in God's image, it is good to know that the latest genetics is consistent with such a perspective.</p>]]></content:encoded>
        <pubDate>Tue, 15 Jan 13 06:00:13 -0800</pubDate>
        <dc:creator>Denis Alexander</dc:creator>
        <!--<dc:date>Jan 15, 2013 06:00</dc:date>-->
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        <title>Southern Baptist Voices: And in Conclusion . . .</title>
        <link>http://biologos.org/blog/southern&#45;baptist&#45;voices&#45;and&#45;in&#45;conclusion&#45;.&#45;?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/southern&#45;baptist&#45;voices&#45;and&#45;in&#45;conclusion&#45;.&#45;?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>My goal in leading this organization for these past three and a half years has been to lay the groundwork to help my fellow evangelicals see that the conflict between our faith and mainstream science is not as great as they thought it was.  In the process, my thinking has been significantly shaped by listening to people who think differently than I do</description>
        <content:encoded><![CDATA[<h3>Looking Back and Looking Ahead</h3>

<p>Kenneth Keathley and I first met in June, 2011, when I was leading BioLogos and he was responsible for academic programs at Southeastern Baptist Theological Seminary. Many Southern Baptist scholars believe the universe is less than ten thousand years old and virtually all are opposed to evolution—the notion of God having created all life forms, including humans, through a process that includes common descent from microbial life.  BioLogos, on the other hand, is an organization specifically dedicated to showing that mainstream science—including evolutionary biology—and a conservative biblically-grounded Christian faith are fully compatible.  With our respective institutional affiliations, one would have expected Dr. Keathley and I to be at opposite poles in the science and faith dialogue, and on some issues we were.  Yet in the brief time we had together that day, we came to see that on the matters that were most fundamental to our Christian faith, we weren’t poles apart at all.   Because we were both followers of Jesus who fully respected the Bible as the divinely inspired Word of God, the ties that bound us together were stronger than the forces which seemed to push us apart. </p>

<img src="http://biologos.org/uploads/static-content/d_falk_bio_new.jpg" alt="" height="405" width="300" style="float:right;margin:0px 0px 0px 10px;" />

<p>Still, we could not ignore those forces that were pushing us apart:  Dr. Keathley had legitimate concerns about theistic evolution<sup>1</sup> and we both believed it important to reflect on those concerns.  In response to our conversation, I wrote the following note to him a few days after our initial meeting: </p>

<blockquote>I am very concerned that we (those who are less skeptical about mainstream science) be thinking along with leaders like yourself about the theological issues in a respectful, indeed earnestly prayerful manner.    I think we very much need the help of conservative theologians.  We cannot rerun the slide towards a watered-down liberal Christianity!   I also sensed that you would be willing to listen and explore with us how best to engage mainstream science in a manner different than most evangelicals have done so far.</blockquote>

<p>With those aims of true dialogue in mind, I proposed that Dr. Keathley request a set of articles from his colleagues which would outline their concerns about the evolutionary creation view.  The  series, which included a set of BioLogos responses to the essays from the Southern Baptist theologians, began in March on 2012 and has continued intermittently throughout the year. </p>  

<p>I am grateful to Dr. Keathley for arranging the submission of these papers, and to the authors for taking the time to articulate their concerns.  As we have developed our responses, our own thinking has been clarified and this has given us an opportunity to outline our commonalities as well as our differences.  I think each of us—Southern Baptist scholars and evolutionary creation scholars alike—would agree that we are nowhere near as far apart as we had thought.  Indeed, I think a significant portion of what was perceived as a gulf separating us was due to the fact that we at BioLogos had not yet laid out our positions clearly enough, not least because BioLogos itself has been growing, adapting, and finding our place in the public square. Indeed, we have changed some of our focus as we have carefully weighed the concerns raised by our Southern Baptist colleagues and others to whom we want to be accountable as brothers and sisters in Christ. </p>

<p>Today, along with this overview of the project, we post the last paper of this series.  Written in the Fall of 2011 by Dr. Steve Lemke, provost at New Orleans Baptist Theological Seminary, it shows just how far we’ve come in clarifying our positions and addressing key issues other believers have about evolutionary creation.  Virtually all of the issues that Dr. Lemke raised at that point have now been addressed in our responses to previous posts in the series.  As you read his article, you’ll be able mouse over highlighted phrases to bring up sidebar text showing how we have responded to each given point through the other articles in the series.  Indeed, I think Dr. Lemke’s article is a great ending for the series; it re-states clearly both the major concerns and the misconceptions that many evangelical Christians have about evolutionary creation.  </p>

<p>This final post in the Southern Baptist Voices Series is also a fitting ending to my term as the as President of The BioLogos Foundation.  My goal in leading the organization for these past three and a half years has been to lay the groundwork to help my fellow evangelicals see that the conflict between our faith and mainstream science is not as great as many perceive it to be.  In the process, my thinking has been significantly shaped by listening to people who think differently than I do.  Some of the people I came to respect and admire the most still believe the universe is less than ten thousand years old.  Others believe it is old, but they do not believe that God created life’s diversity through the evolutionary process, and they don’t believe in common descent.  Though I think they are wrong about those important facts (even as they think I am wrong about the findings of mainstream science), I have appreciated my interaction with them.  After all, laying the groundwork for a more fruitful interaction between science and evangelical Christianity begins with gathering together at the Table to worship, to pray, to study, to think, and to be a manifestation of God’s love together, especially in and through our differences. </p>

<p>We believe that the Southern Baptist Voices project should and will continue, and we’re currently in conversation about the best steps to take to ensure that it does.   Moreover there are several other important projects of this sort that have not been quite so visible—at least on the website—and I remain very enthusiastic about them as well. One of my favorite projects has been carried out in conjunction with my colleagues at Point Loma Nazarene University: our annual week-long workshop for fifty Christian school science teachers.  Another is our work alongside of our brothers and sisters in Christ at Reasons to Believe.  This kind of cooperation—between BioLogos and those who think quite differently about creation than we do—is important for the Church’s witness to our Creator and Savior; the foundation is now in place and we’ll be able to build upon it going forward—laying out our similarities and differences together, rather than building walls between us. </p>

<p>Looking back, leading BioLogos at this very critical junction in the history of the Church has been the greatest privilege of my career.  A couple of weeks ago I was with my 96 year old father and we were going through some of his old files.  We found a reference to a dream he had in September, 1977, while I was a brand-new Assistant Professor at Syracuse University.   At the time, my career as a molecular geneticist was focused on trying to understand how genes worked in engineering the process of development from a fertilized egg.   My father dream was that I had made an all-important discovery about the nature of life.  Like most dreams, it never came true in the way he expected it might.  But a few weeks later in mid-October 1977, I decided to visit a small evangelical church—a move I thought might be my last desperate attempt to find a church for my family and me that would equip me to function as both a scientist and an evangelical Christian: before that day I had all but given up my search for such a community.  Yet it was finding that church, not something that happened (or ever could happen) in my lab, that constituted my single most important discovery about the nature of life.  Much better than my father’s dream about genes, I discovered there was room for people like me in a Bible-focused church after all. </p>

<p> The Church must not lose its scientists and its many university-educated young people who go on to accept the findings at the core of biology, geology, physical anthropology and astronomy.   But we who accept the foundations of these disciplines need the Church to affirm and hold fast to the centrality of Scripture and the truths of the faith, even as the Church, in turn, needs to listen closely to what science has to say about the creation we scientists study so intricately.  </p>

<p>I continue to be in regular dialog with people who are somewhat leery about those science textbooks, and I have come to understand the basis of that leeriness.  It is not that the science books are wrong, it’s that we scientists have done a somewhat lousy job of sitting down with those who are not scientists and talking about the contents of those books; moreover, it is that we scientists have done too much talking to each other and not enough listening to the legitimate concerns that others raise.   We now need to move towards a new reality—a reality which begins with conversation. </p> 

<p>That’s what this Southern Baptist series has been about.  I know of no better way to end my leadership role in BioLogos than with the final posting of this series.  However, even this ending is just the beginning.  For all of us, the real work lies up ahead—just around the next bend. </p>

<p><em>Dr. Lemke’s essay may be found <a href="http://biologos.org/blog/southern-baptist-series-evolution-and-the-problem-of-evil">here</a>. Please keep in mind that it was written about fourteen months ago, before the series began. Together with the work of all of the Southern Baptist scholars, this essay shows how important it has been to clarify our positions.  Again, as you read the essay, each highlighted section is linked to a “pop-out comment” which will appear in the sidebar as you click or mouse over it.  In each case, the comment will show where one of the previous BioLogos responses in this series has addressed the point Dr. Lemke has made.   This does not mean that the matter is settled—not by any stretch.  It simply means that we’re thinking about the issues he raises and it shows some of our thoughts so far.</em></p>

<h3>Notes</h3> 
<p class="date">1. Indeed, it is likely the term, “theistic evolution” was part of the problem: evolution is the noun and God’s role in it only an adjective.  “Evolutionary creation” is a better term, and the one we prefer. </p> 
]]></content:encoded>
        <pubDate>Fri, 28 Dec 12 10:44:00 -0800</pubDate>
        <dc:creator>Darrel Falk</dc:creator>
        <!--<dc:date>Dec 28, 2012 10:44</dc:date>-->
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        <title>Introducing the BioLogos Navigator</title>
        <link>http://biologos.org/blog/introducing&#45;the&#45;biologos&#45;navigator?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/introducing&#45;the&#45;biologos&#45;navigator?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Part of BioLogos mission is to show how all things hold together in Christ—to show how a Christian worldview integrates the knowledge we have of God through the Scriptures with the knowledge we have of God through the other areas in which He reveals himself as Creator and Redeemer.</description>
        <content:encoded><![CDATA[<p>When we at BioLogos affirm that, “all things hold together in Christ,” what do we mean?  In short, we believe that there is no aspect of creation or of human experience that does not fall under the sovereignty and authority of God, and that He does not claim for himself and intend for redemption.  After all, at his resurrection, Jesus himself said, “All authority in heaven and on earth has been given to me” (Matthew 28:18). But more than just proclaiming God’s sovereignty over creation, we believe that God is revealing himself in every aspect of creation, as well—that led by the Holy Spirit, we will find pointers to God wherever we turn our gaze.  Christian knowledge, therefore, is not limited to the study of the Scriptures or of Church History, but includes the study of the natural world and of all of human culture, as well.  In fact, to fully appreciate God’s abundant grace and providence, we need to be looking to all of these domains of knowledge as domains of revelation, too. </p>

<p>Part of the BioLogos mission, then, is to show <em>how</em> all things hold together in Christ—to show how a Christian worldview integrates the knowledge we have of God through the Scriptures with the knowledge we have of God through the other areas in which he reveals himself as Creator and Redeemer.  Our website contains a wealth of Christian scholarship in a wide range of fields—from biology, to cosmology, to mathematics, to Biblical studies, to history, to theology—all demonstrating that the best contemporary science is compatible with Biblical Christian faith. But today we introduce a new tool—the BioLogos Navigator—to make these posts more accessible, and to show how they inter-relate (see sidebar on the right).  </p>

<p>Modeled on the astrolabes that early astronomers and sailors used to orient themselves under the heavens, our Navigator makes the cross of Christ the starting point by which we understand the cosmos.  Each of the four arms of the cross represents one of the domains of knowledge and experience through which God reveals himself to the world: Scripture, the Church, Nature and Culture.  These domains are not in opposition to each other, but are complementary and inter-related areas through which we can recognize God at work in the world. Linking these four domains is a network of specific topics relevant to the science and faith conversation.  Their arrangement suggests how each relates to the four domains but also to teach other.  Clicking on an individual topic tag highlights not only that topic, but other topics that are linked to it—sometimes in unexpected ways.</p>

<p>Clicking a topic tag a second time takes you to the Topic Landing page: a curated selection of the best resources on that subject from the BioLogos archives.  (The image above shows the <em><a href="http://biologos.org/navigator/Christianity+&+Science+-+Then+and+Now">Christianity & Science—Then and Now</a></em> Landing page, complete with Navigator and highlighted tags.) At the bottom of each page is a link to our Resource Finder, where you can investigate additional materials on that topic, as well. By exploring the relationships between the topics on the Navigator itself, and by delving deep into each topic via the resources presented on the landing pages, readers can focus on specific aspects of the harmony between science and Christian faith while also getting the wide view of God’s providential work in all things in the heavens and on the earth. </p>

<p>In the coming days and weeks, the BioLogos Navigator will be more fully integrated into the rest of the site, accessible directly from the Forum homepage and from the Resources dropdown list at the top of every page.  We’ll also be including features that help place each blog post on the “knowledge map” defined by the domains and topic tags.  Finally, the Topic Pages will also be periodically updated with the latest and best new materials in each topic. In the meantime, <strong>you can access the Navigator by clicking anywhere on the small image in the sidebar, above</strong>, and find a link to this post at the upper right corner of our homepage.  So take some time to explore our site with this new tool, which we think will to help orient our readers in the science and faith conversation, while always pointing to Jesus, the Christ, through whom all things were made.</p><br />]]></content:encoded>
        <pubDate>Thu, 27 Dec 12 06:19:49 -0800</pubDate>
        <dc:creator>Mark Sprinkle</dc:creator>
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        <title>Series: Behe, Lenski and the “Edge” of Evolution</title>
        <link>http://biologos.org/blog/series/behe&#45;lenski&#45;and&#45;the&#45;edge&#45;of&#45;evolution?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/behe&#45;lenski&#45;and&#45;the&#45;edge&#45;of&#45;evolution?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this series, we reexamine the claim made by Intelligent Design proponent Michael Behe to have found a limit to “Darwinian” evolution in light of recent results from the laboratory of Richard Lenski.</description>
        <content:encoded><![CDATA[<p>In previous posts in this <a href="http://biologos.org/blog/series/behe-lenski-and-the-edge-of-evolution">series</a>, we evaluated Behe’s claimed “edge” for what evolution can (and allegedly cannot) accomplish by examining the step-by-step path that bacteria in the Long Term Evolution Experiment (LTEE) took to arrive at a mechanism for utilizing citrate under aerobic conditions. In this post, we look at the implications of these results for another of Behe’s related ideas: that of irreducible complexity.</p>
 
<h3>Behe and IC</h3>

<p>Since we have previously explored Behe’s idea of irreducible complexity in an entire <a href="http://biologos.org/blog/series/understanding-evolution-the-evolutionary-origins-of-irreducible-complexity">series</a>, we will not revisit it here in great detail. It is important, however, to reemphasize how Behe defines irreducible complexity (IC). As we noted in the first part of that series, Behe frames his ideas on IC as a counter to Darwin’s ideas of gradualism.</p>

<p>For Behe, the argument for IC is a critique of gradual evolutionary processes, of the kind that Darwin saw as necessary for his theory to hold. When Behe introduces and defines IC in his book <em>Darwin’s Black Box</em>, he has a key quote from Darwin on gradualism explicitly in view:</p>

<blockquote>Darwin knew that his theory of gradual evolution by natural selection carried a heavy burden: "If it could be demonstrated that any complex organ existed which could not possibly have been formed by numerous, successive, slight modifications, my theory would absolutely break down."<br></br>

It is safe to say the most of the scientific skepticism about Darwinism in the past century has centered on this requirement… critics of Darwin have suspected that his criterion of failure had been met. But how can we be confident? What type of biological system could not be formed by “numerous, successive, slight modifications”? <br></br>

Well, for starters, a system that is irreducibly complex. By irreducibly complex I mean a single system composed of several well-matched, interacting parts that contribute to the basic function, wherein the removal of any one of the parts causes the system to effectively cease functioning. An irreducibly complex system cannot be produced directly (that is, by continuously improving the initial function, which continues to work by the same mechanism) by slight, successive modifications of a precursor system, because any precursor to an irreducibly complex system that is missing a part is by definition nonfunctional. An irreducibly complex biological system, if there is such a thing, would be a powerful challenge to Darwinian evolution.<br></br>(<em>Darwin’s Black Box</em>, p. 39) </blockquote>

<p>The definition of an IC system is thus straightforward: it is a matched group of components, where all the components are necessary for the function of the system. The necessity of each component can be demonstrated by attempting to remove it – if the system no longer works if even one component is removed, it is by definition IC.</p>


<h3>Behe and exaptation</h3> 
 
<p>The standard response to Behe’s argument from IC is to discuss the evolutionary concept of exaptation: that new systems and functions are cobbled together from components that have functional roles in other systems already present in the cell. Behe discusses, and ultimately dismisses this idea in <em>Darwin’s Black Box</em> as follows: </p>

<blockquote>In Chapter 2 I noted that one couldn’t take specialized parts of other complex systems (such as the spring from a grandfather clock) and use them directly as specialized parts of a second irreducible system (like a mousetrap) unless the parts were first extensively modified. Analogous parts playing roles in other systems cannot relieve the irreducible complexity of a new system; the focus simply shifts from “making” the components to “modifying” them. In either case, there is no new function unless an intelligent agent guides the setup.
</blockquote>

<p>So for Behe, two points are clear: parts selected for function in one system cannot be exapted for use in other systems since they would require too many modifications; and the emergence of a new function is the indication that an intelligent agent is guiding the process. </p>

<p>Behe has <a href="http://www.evolutionnews.org/2012/11/rose-colored_gl066361.html">responded</a> to my previous posts to claim that the tandem duplication event that brought about the Cit+ actualization event should not be considered a gain-of-FCT mutation under his criteria:</p> 

<blockquote>The gene duplication which brought an oxygen-tolerant promoter near to the citT gene did not make any new functional element. Rather, it simply duplicated existing features. The two FCTs comprising the oxygen tolerant citrate transporter locus -- the promoter and the gene -- were functional before the duplication and functional after. I had written in my review that one type of mutation that could be categorized as a gain-of-FCT was gene duplication with subsequent sequence modification, to allow the gene to specialize in some task. Venema thinks the mutation observed by Lenski is such an event. He has overlooked the fact that there was no subsequent sequence modification; a segment of DNA simply tandemly duplicated, bringing together two pre-existing FCTs.</blockquote>

<p>As an aside, quibbling over whether this mutation constitutes a “genuine gain-of-FCT” mutation is not my purpose here, since the definition is Behe’s to define, and I am not aware of anyone else in the scientific literature who uses Behe’s definitions.  That said, I consider it passing strange to claim that a series of events that produced a gene that has a new sequence and functional properties distinct from either of its component parts does not constitute the production of a new “functional coded element.” If nothing else, it is a functional coded element that has not previously existed, cobbled together from parts of other functional coded elements, displaying new, adaptive properties. If according to Behe’s definition that’s not “new” or a “gain” then I guess it’s not, but that seems to me to torture the words “new” and “gain” beyond recognition. But I digress.</p>

<p>The important point for our purposes, however, lies elsewhere. Note carefully how Behe describes the Cit+ actualization event. By dividing the new aerobic citrate transporter gene into two previously existing FCTs, Behe is describing an exaptation event. The one FCT (the aerobic promoter) starts off as a necessary component of a gene transcribed when oxygen is present. As such it is under selection for that function, which has nothing to do with expressing a citrate transporter. The second FCT (the citrate transporter amino acid coding sequence) is under selection to be a citrate transporter, which has nothing to do with the function of the gene the promoter comes from. The Cit+ actualization event, then, exapts these two FCTs by placing them together to create a new function (which Behe does not mention). </p>

<p>And here’s the kicker: the new system (expression of the citrate transporter when oxygen is present) requires both FCTs in order to work. It has become a system of “well matched, interacting parts that contribute to the basic function” (i.e. transporting citrate in the presence of oxygen) “wherein the removal of any one of the parts causes the system to effectively cease functioning.” </p>

<p>In other words, it is a new IC system – a small and relatively simple system, yes, but nonetheless IC. Now, I’m fairly sure that Behe would not define this system as IC, since the documentation of an IC system evolving would seriously undermine his thesis. I am interested, however, in how he will handle this development, on two fronts. First, he would need to explain specifically why two exapted FCTs that are required together for a basic function does not constitute an IC system (if indeed he wishes to preserve his definition). Secondly, given that he allows for exaptation in this case, he needs to explain how exaptation is not a threat to IC in general. In <em>Darwin’s Black Box</em> he disallows exaptation altogether, but that option is no longer on the table. </p>

<p>In the next post in this series, we’ll continue to explore the evidence for exaptation  as a means to build new FCTs, and go on to examine the implications of this evidence for Douglas Axe’s proposed limit to evolutionary mechanisms.</p> 

<h3>For further reading:</h3>
 
<p>Blount, Z.D., Barrick, J.E., Davidson, C.J. and Lenski, R.E. (2012). Genomic analysis of a key innovation in an experimental Escherichia coli population. <em>Nature</em> 489; 513- 518.</p> 
<p>Michael J. Behe, <em>Darwin’s Black Box: The Search for the Limits of Darwinism</em> (New York: Free Press, 2006).</p>
<p>Michael J. Behe, <em>The Edge of Evolution: The Search for the Limits of Darwinism</em> (New York: Free Press, 2007).</p>
<p>Michael J. Behe (2010). Experimental evolution, loss-of-function mutations, and “The first rule of adaptive evolution”. <em>The Quarterly Review of Biology</em> 85(4); 419-445. </p>]]></content:encoded>
        <pubDate>Thu, 29 Nov 12 08:04:11 -0800</pubDate>
        <dc:creator>Dennis Venema</dc:creator>
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        <title>Confronting Our Fears, Part 2: Losing Biblical Authority</title>
        <link>http://biologos.org/blog/confronting&#45;our&#45;fears&#45;part&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/confronting&#45;our&#45;fears&#45;part&#45;2?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Throughout my various conversations with fellow believers, the most&#45;mentioned anxiety over accepting an evolutionary creationist paradigm is the fear of losing the Bible as one’s spiritual anchor and source of authority.</description>
        <content:encoded><![CDATA[<p style="margin: 0 0 0 295px;"><em>All Scripture is breathed out by God and profitable for teaching, for reproof, for correction, and for training in righteousness, that the man of God may be complete, equipped for every good work. (2 Tim 3:16-17, ESV)</em></p>

<p>Throughout my various conversations with fellow believers, the most-mentioned anxiety over accepting an evolutionary creationist paradigm is the fear of losing the Bible as one’s spiritual anchor and source of authority—the texts that give the global Christian community its doctrinal and philosophical distinctiveness.  Growing up in the Baptist tradition and later becoming a member of the Southern Baptist Convention, the inerrancy of “God-breathed”<sup>1</sup> Scripture and its identity as the fount of all truth was paramount in defining my life as a Christian believer.  Of course, while some would debate the veracity of such a doctrine as it pertains to this discussion, I believe that neither inerrancy nor authority is at issue when it comes to Genesis’ opening chapter.  The real issue is hermeneutics—how we read the authoritative texts.  </p>

<p>John Wesley (1703-1791), the eighteenth-century Anglican cleric and theologian who founded the Methodist movement in partnership with his brother Charles, held to a “literal” method of interpretation:</p>
  
<br />
<blockquote>The general rule of interpreting Scripture is this: the literal sense of every text is to be taken, if it be not contrary to some other texts. But in that case, the obscure text is to be interpreted by those which speak more plainly.<sup>2</sup></blockquote>

<p>A modern adaptation of Wesley’s hermeneutic states, “If the literal sense makes good sense, seek no other sense lest you come up with nonsense.”  But though this is a commonly-used interpretative method in evangelical Christian churches today, I have found that it unnecessarily lends itself to the fear of losing biblical authority.  This tendency toward fear is especially acute when the individual doing the interpreting does not have at his or her fingertips the full scope of knowledge required to allow the biblical text to speak for itself—or rather, to allow God to speak through ancient genres with which the interpreter isn’t naturally familiar. </p>

<p>I readily admit that the “literal sense” of Genesis 1—as dictated by our own culture that focuses on material origins and unwittingly holds Genesis 1 hostage to the scientific method—<em>does in fact rule out</em> cosmological and biological evolution as God’s creative methods.  But I would also ask the question of whether a “literary sense” of Genesis 1 <em>allows</em> for evolution.  To read evolution into Scripture (eisegesis) or out of Scripture (exegesis) would be dishonest, especially considering that the author (or final redactor) of Genesis was not privy to modern scientific discoveries.  I would also argue that a “literal” reading of Genesis 1, framed by our own modern paradigm, is <em>unfaithful</em> to the original intent of the author, and that we should take special care to read Genesis 1 “literarily” through the eyes of the ancient Hebrews, understanding what was (and wasn’t) important to them.  Dr. Conrad Hyers writes:</p>

<blockquote>This is the interpretive issue, and it cannot be settled by dogmatic assertions, threats about creeping secularism, or attempts to associate views with skepticism . . . .  Nor can the issue be settled by marshaling scientific evidence for or against either evolution or six-day creation, since it would first need to be demonstrated that the Genesis accounts <strong>intended</strong> to offer scientific and historical statements.  Otherwise the whole discussion is based on the wrong premises.  As such it is scientific creationism itself which compromises the religious meaning of Genesis and is an accommodation to scientific language and method.<sup>3</sup></blockquote>

<p>Since Genesis was written in the Hebrew language and most of us can’t read Hebrew, we take for granted the necessity of translating from an ancient language into another in which we are fluent.  Yet, we often forget that, because we are separated by at least 2,500 years from the culture that produced Genesis, we also need the culture “translated” for us as well.<sup>4</sup></p>

<h3>Returning to the text</h3>

<p>Adopting Wesley’s hermeneutic strongly lends itself to ruling out both old-earth creationism and theistic evolution, but as a firm believer that “all truth is God’s truth,” I felt that I was missing something.  Because I believed (and still do) that the six days of creation were six, successive, 24-hour periods (“there was evening and there was morning—the <em>n<sup>th</sup></em> day”), I struggled mightily to understand Genesis 1 in light of what I had been learning about the vast age of the cosmos as determined by the best scientific minds, both secular and Christian.<sup>5</sup> If the age of the cosmos truly was as old as the scientific establishment has led us to believe, I thought that digging deeper into the culture of the ancient Near East could help me reconcile the two opposing forces of scientific observation and biblical testimony.  </p>

<p>It was at this time that I discovered the works of John Walton, Professor of Old Testament at Wheaton College.  His commentary on Genesis<sup>6</sup> and his book on the conceptual world of the Hebrew Scriptures<sup>7</sup> propelled me toward a realization that the focus of Genesis 1 was much less on the material origin of the cosmos and much more on the cosmos’ purpose as a functional and purposeful dwelling place for God—a cosmic temple, if you will.  Furthermore, his reading actually accentuated mankind’s role as representative “image-bearers” of God, as wielders of his authority on Earth.  I learned that the symbolism and literary structure of Genesis 1, including the 7-day structure of the creation week, had its roots in an ancient Near Eastern (ANE) cognitive environment that held the concepts of function and purpose to be more important than (but not entirely exclusive of) material origins, the latter of which currently guides our modern, scientific way of thinking.  It even reconciled the seemingly contradictory accounts of a weeklong series of creative acts and a 14.6-billion-year-old universe.</p>

<p>With these interpretive tools in hand, I was able to successfully assuage my fear of losing biblical authority insofar as Genesis 1 was concerned, and my openness to evolutionary theory came quite naturally.  If the preponderance of scientific evidence adequately explained the existence of all biological organisms, past and present, by evolutionary means, I could accept mainstream evolutionary theory<sup>8</sup> while maintaining the theological authority of the Bible’s opening chapter.  As long as I took pains to bridge the vast cultural gap when attempting to determine the theological message of the text—which God accommodated for the Hebrew culture and chose to express in a culturally bound literary form—I wouldn’t need to fear abandoning the Bible as a source of theological truth and spiritual authority.  As long as I aimed to let the Bible to speak for itself, using the best biblical scholarship available to determine who wrote the various books of the Bible, to whom they were written, and when they were written, I could have confidence that the end result would be a more faithful pronouncement of what the Bible is actually telling us, millennia later, through ancient voices.</p>

<p>Of course, things are never that easy when it comes to biblical authority.  The functional ontology and temple imagery of Genesis 1, as well as its parallels with other ANE creation myths and temple dedication texts, carry over into the next two chapters of Genesis, which feature the creation of Adam and Eve and the entrance of sin and death into the world of mankind.  What was I to do with the historicity of Adam and Eve?  </p>

<p>If the Hebrew Scriptures stood alone as a source of spiritual authority in my life as a Christian, it wouldn’t be much of an issue.  I could accept a mythological Adam and Eve within the framework of an etiological account<sup>9</sup> of human origins, but there is this second corpus of literature held sacred by Christians commonly known as the New Testament.  As a Christian, I now had an issue with Paul and his clear treatment of Adam as a real person rooted in human history. If that wasn’t enough, I was also confronted by the salvific role of Jesus himself.  How could an historical, literal Jesus solve the very real problem of sin that resulted from the rebellious act of a mythical, literary Adam?  I’ll address those issues next time, when we look at the second fear many evangelical Christians have about considering evolutionary creation: the fear of losing our Savior.</p>

<h3>Notes</h3>
<p class="date">1. The literal meaning of the Greek word θεόπνευστος (theopneustos).<br />
2. John Wesley, <em>The Letters of the Rev. John Wesley</em> (London: Epworth Press, 1931), vol. III, 129.<br />
3. Conrad Hyers, <em>The Meaning of Creation: Genesis and Modern Science</em> (Atlanta: John Knox Press, 1984), 26; emphasis in the original.<br />
4. John H. Walton, interview. <em>From the Dust: Conversations in Creation.</em>  Blu-Ray Disc.  Directed by Ryan Petty.  Mountain View, CA: Highway Media and The BioLogos Foundation, 2012.<br />
5. For a secular treatment, see G. Brent Dalrymple, <em>The Age of the Earth</em> (Stanford: Stanford University Press, 1994); for evangelical Christian treatments, see Davis A. Young and Ralph F. Stearley, <em>The Bible, Rocks and Time: Geological Evidence for the Age of the Earth</em> (Grand Rapids: IVP Academic, 2008); Howard J. Van Till, <em>The Fourth Day: What the Bible and the Heavens Are Telling Us about the Creation</em> (Grand Rapids: William B. Eerdmans Publishing Company, 1986); Howard J. Van Till, ed., <em>Portraits of Creation: Biblical and Scientific Perspectives on the World’s Formation</em> (Grand Rapids: William B. Eerdmans Publishing Company, 1990).<br />
6. John H. Walton, <em>The NIV Application Commentary: Genesis</em> (Grand Rapids: Zondervan, 2001).<br />
7. John H. Walton, <em>Ancient Near Eastern Thought and Old Testament: Introducing the Conceptual World of the Hebrew Bible</em> (Grand Rapids: Baker Academic, 2006).  See also John H. Walton, <em>The Lost World of Genesis One: Ancient Cosmology and the Origins Debate</em> (Downers Grove, IL: IVP Academic, 2009); John H. Walton, <em>Genesis 1 as Ancient Cosmology</em> (Winona Lake, IN: Eisenbrauns, 2011); Gordon J. Wenham, <em>Word Biblical Commentary: Genesis 1-15</em> (Nashville: Thomas Nelson, 1987); Gordon J. Glover, <em>Beyond the Firmament: Understanding Science and the Theology of Creation </em>(Chesapeake, VA: Watertree Press, LLC, 2007).<br />
8. See Daniel J. Fairbanks, <em>Relics of Eden: The Powerful Evidence of Evolution in Human DNA</em> (Amherst, NY: Prometheus Books, 2007) and Keith B. Miller, ed., <em>Perspectives on an Evolving Creation </em>(Grand Rapids: William B. Eerdmans Publishing Company, 2003).<br />
9. “Etiology,” Wikipedia, accessed October 08, 2012, <a href="“http://en.wikipedia.org/wiki/Etiology">http://en.wikipedia.org/wiki/Etiology</a>.</p>
]]></content:encoded>
        <pubDate>Tue, 13 Nov 12 05:00:46 -0800</pubDate>
        <dc:creator>Mike Beidler</dc:creator>
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        <title>Introducing The Resource Finder</title>
        <link>http://biologos.org/blog/introducing&#45;the&#45;resource&#45;finder?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/introducing&#45;the&#45;resource&#45;finder?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>How do we give our visitors access to our vast archive of resources, and how do we make sure they are finding the resources that address their most pressing questions?</description>
        <content:encoded><![CDATA[<p>On April 29, 2009 we launched The BioLogos Forum (then called “Science & the Sacred”) with a fairly modest goal: to post one new essay on the interface between science and faith each week. As the BioLogos movement grew, however, that one essay target quickly turned into two essays a week, then three, until we were posting new essays almost every day! Today, our humble blog has grown to include nearly 1,200 posts. Factor in our scholarly essays, videos, and Questions section and you have a site practically overflowing with content.</p>

<p>However, with so much content on the site, older posts—even the best ones—often became lost in the shuffle. So we asked ourselves two questions: How do we give our visitors access to our vast archive of resources, and how do we make sure they are finding the resources that address their most pressing questions?</p>

<p><strong>The answer is our new <a href="/resources/find/">Resource Finder</a>.</strong></p>

<p>The Resource Finder rests on a foundation of 41 topic tags, covering everything from Genesis to genetics to worship. By selecting any topic, users can find the posts addressing the issues that interest them. Looking for more detail? Users can also narrow their results by choosing an intended audience and format, or by adding more topics to the search. </p>

<p>Here’s an example: Say you’re looking for resources about creation and origins. Just click the “Creation & Origins” tag, and the matching results appear below almost instantly.</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/resource_finder_1.jpg" alt="" height="397" width="570"  /></p>

<p>You can refine the results by adding a second tag to the search. Let’s add “Genesis”. The results will list all the entries that match both tags first, followed by posts that match either. You can change the list to include only results that match all selected tags by choosing “All” rather than “Any” at the top of the tag list.</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/resource_finder_2.jpg" alt="" height="396" width="570"  /></p>

<p>Lastly, let’s pick a format and intended audience. How about videos for pastors?</p>

<p class="caption-center"><img src="http://biologos.org/uploads/static-content/resource_finder_3.jpg" alt="" height="396" width="570"  /></p>

<p>And there you have it! From over 1,300 resources, we’ve found five specific videos, geared towards pastors, that address both Genesis and origins. Want to share the results? Just copy and paste the link from your browser! Even better, by click the orange RSS button in the top left corner of the page, you can create a custom feed for Google Reader (or any other RSS reader) that will let you know whenever a new resource matching those categories goes live on our website!</p>

<p>We’re excited to see what the BioLogos community thinks about the Resource Finder, and even more excited to see how it will impact the ongoing dialogue about science and Christian faith. So have a look and share your thoughts in the comment section below!</p>]]></content:encoded>
        <pubDate>Thu, 01 Nov 12 06:50:36 -0700</pubDate>
        <dc:creator>Stephen Mapes</dc:creator>
        <!--<dc:date>Nov 01, 2012 06:50</dc:date>-->
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        <title>Quali sono le differenze tra BioLogos e l’Evoluzionismo, il Disegno Intelligente ed il Creazionismo?</title>
        <link>http://biologos.org/questions/biologos&#45;id&#45;creationism&#45;itl?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/questions/biologos&#45;id&#45;creationism&#45;itl?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Noi di BioLogos crediamo che Dio abbia usato il processo evolutivo per creare tutte le forme di vita presenti oggi sulla Terra. Mentre da un lato accettiamo la scienza dell’evoluzione, rifiutiamo nettamente l’evoluzionismo.  L’evoluzionismo è una visione atea del mondo ed afferma che la vita si è sviluppata senza Dio, senza un fine e senza intenzionalità. Al contrario, noi siamo d’accordo con i Cristiani che, aderendo al Disegno Intelligente e al Creazionismo, affermano che il Dio della Bibbia ha creato l’universo e tutte le forme di vita. I Cristiani sono però in disaccordo su come Dio ha creato. I Creazionisti della Terra Giovane credono che Dio abbia espletato la sua azione creatrice tra i 6.000 e i 10.000 anni fa e sono in disaccordo con gran parte della scienza tradizionale. I sostenitori del Disegno Intelligente accettano gran parte della scienza dell’evoluzione, ma sostengono che alcune caratteristiche della vita siano meglio spiegate dall’intervento diretto di una entità intelligente, piuttosto che da un normale e regolare modo di operare da parte di Dio tramite i processi naturali. Noi di BioLogos siamo d’accordo con il moderno consenso scientifico riguardo all’età  della Terra e dello sviluppo evolutivo di tutte le specie, vedendo queste come descrizioni di come Dio ha creato. Il termine BioLogos deriva dalle parole bios (vita) e logos (parola), e si riferisce all’inizio del Vangelo secondo Giovanni: “Nel principio c’era la Parola, e la Parola era presso Dio, e la Parola era Dio. Essa era nel principio con Dio. Per mezzo di lei tutte le cose sono state fatte”.</description>
        <content:encoded><![CDATA[<h3>La Visione di BioLogos</h3>
<p>La visione di BioLogos asserisce che sia le Sacre Scritture, sia la scienza moderna rivelano la Verità, e che queste due verità non sono in contraddizione l’una con l’altra. Mentre da un lato ci sono differenti visioni all’interno della comunità di BioLogos su <em>come</em> riconciliare le verità della scienza con le verità delle Sacre Scritture per quanto riguarda alcuni argomenti specifici (ad esempio in relazione alla storicità della figura di Adamo<sup>1</sup>), crediamo concordemente che la Bibbia sia la Parola di Dio, autorevole  e divinamente inspirata. BioLogos accetta il moderno consenso scientifico sull’età della Terra e la teoria del progenitore comune, incluso il progenitore comune degli esseri umani.</p>

<h3>Evoluzionismo</h3>
<p>Mentre da un lato BioLogos accetta l’evoluzione, dall’altro rifiuta totalmente <em>l’Evoluzionismo</em>, ovvero la visione atea del mondo che così spesso accompagna l’accettazione dell’evoluzione biologica nei discorsi pubblici. Coloro che propongono l’Evoluzionismo credono che ogni aspetto della vita sarà un giorno spiegato tramite la teoria dell’evoluzione. In questo modo L’Evoluzionismo è un sottocaso dello <em>scientismo</em>, una più ampia visione secondo la quale l’unica reale verità è quella che può essere scoperta dalla scienza. Sono queste le posizioni tenute comunemente dai <em>materialisti</em> (anche chiamati <em>naturalisti filosofici</em>) che negano l’esistenza del sovrannaturale.</p>

<p>La visione di BioLogos celebra Dio come il Creatore. Qualche volta viene chiamata Evoluzione Teistica o Creazione Evolutiva. Il <em>Teismo</em> è il credere in un Dio a cui sta a cuore il creato e che interagisce con esso. Il Teismo è diverso dal <em>deismo</em>, che indica la convinzione dell’esistenza di un creatore distante e non direttamente coinvolto con l’universo, che spesso è poco più della somma totale delle leggi della fisica. L’Evoluzione Teistica, perciò, è la convinzione che l’evoluzione sia il mezzo con cui Dio ha creato la vita.</p>

<p>Poiché il termine <em>evoluzione</em> è talvolta associato all’ateismo, un termine che meglio descrive il credere in un Dio che ha scelto di creare il mondo per mezzo dell’evoluzione è <em>BioLogos</em>. BioLogos deriva dalle parole greche <em>bios</em> (vita) e <em>logos</em> (parola), riferendosi a Giovanni 1:1: “Nel principio c’era la Parola, e la Parola era presso Dio, e la Parola era Dio”.</p>

<h3>Disegno Intelligente</h3>
<p>Al contrario di alcune interpretazioni, il Disegno Intelligente (o ID, dall’inglese Intelligent Design) non fa nessuna specifica affermazione teologica. Al contrario, coloro che propongono l’ID argomentano che “determinate caratteristiche dell’universo e degli esseri viventi sono meglio spiegate da una causa intelligente, piuttosto che da un processo indiretto come la selezione naturale”<sup>2</sup>, e che l’esistenza di questa causa intelligente è una ipotesi scientificamente testabile. Inoltre, i teorici del Disegno Intelligente tentano di dimostrare che una causa intelligente è la migliore spiegazione di certi fenomeni come i sistemi irriducibilmente complessi (ad esempio i “flagelli” batterici) le specifiche e complesse informazioni contenute nel DNA. </p>

<p>Anche coloro che supportano la visione di BioLogos credono in una causa intelligente. L’universo e tutto ciò che contiene è stato creato ed è sostenuto e governato da Dio:</p>

<blockquote>…in [Cristo] tutte le cose del Cielo e della Terra sono state create, visibili e invisibili …tutte le cose sono state create tramite Lui e da Lui. Egli stesso è prima di tutte le cose e in Lui tutte le cose sono tenute insieme. (Col 1:16,17 NRSV).</blockquote>

<p>BioLogos si differenzia dal movimento del Disegno Intelligente nel senso che noi non abbiamo problemi nel riconoscere la scienza moderna tradizionale. La selezione naturale come descritta da Charles Darwin non è contraria al teismo. Similmente, siamo più che soddisfatti di come la biologia evoluzionista ci informa riguardo al meccanismo di creazione, con la piena consapevolezza che tutto ciò che succede ed è successo capita ed è capitato attraverso l’azione di Dio. Celebriamo la creazione come completamente generata da Dio. Ci meravigliamo della sua bellezza e siamo grati di avere il privilegio di sperimentare la creazione stessa.</p>

<p>BioLogos celebra la realtà dei miracoli, inclusi i miracoli delle Sacre Scritture, ma anche quelli che sperimentiamo nel mondo dei giorni nostri attraverso le preghiere a cui Dio dà ascolto e attraverso l’azione dello Spirito Santo nelle nostre vite. D’altra parte, la dimostrazione di tali azioni sovrannaturali nella storia del mondo è, noi pensiamo, improbabile da provare scientificamente.
Ricapitolando, BioLogos differisce dal movimento del Disegno Intelligente in tre aspetti:</p>

<ol><li>Siamo scettici riguardo alla possibilità della scienza biologica di provare l’esistenza di un “Disegnatore” intelligente (che noi riteniamo essere il Dio della Bibbia), mentre i sostenitori dell’ID ne sono confidenti</li>
<li>Troviamo non convincenti quei tentativi dei teorici del Disegno Intelligente di dimostrare scientificamente le azioni sovrannaturali operate da Dio nella storia naturale, mentre i sostenitori dell’ID credono di averlo già sufficientemente dimostrato</li>
<li>Non troviamo nessun motivo biblico per vedere i processi naturali (inclusa la selezione naturale) come qualcosa che ha rimosso Dio dal processo della creazione. E’ tutta una Sua opera ed è tutta stata intelligentemente predefinita. Coloro che credono nel movimento ID  per la maggior parte rigettano tutte o alcune delle più importanti conclusioni della teoria dell’evoluzione.</li></ol>

<h3>Creazionismo</h3>
<p>BioLogos afferma che la Terra e l’universo sono stati creati.</p>
<p>Il Creazionismo, generalmente, si riferisce al credere che la vita sulla Terra è il risultato di un intervento sovrannaturale diretto, concordemente con una interpretazione altamente letterale della Genesi 1-3. Ci sono due correnti principali di Creazionisti, coloro che credono che la Terra sia giovane e coloro che credono che sia antica.</p>

<p>I Creazionisti della Terra Giovane (anche denominati YECs, dall’inglese Young Earth Creationists) ritengono che la Terra abbia dai 6.000 ai 10.000 anni, un quadro derivato dalle genealogie presenti nella Bibbia. Gli YECs credono che il modo più fedele di leggere le Sacre Scritture sia sotto la prospettiva di una creazione durata letteralmente 6 giorni, come descritta nel primo capitolo della Genesi, e inoltre credono letteralmente che una alluvione mondiale, come descritta nella Genesi 6-9, sia stata responsabile dell’aspetto geologico della Terra e della presenza di testimonianze fossili. I sostenitori del Creazionismo della Terra Giovane respingono inoltre l’esistenza di un progenitore comune di tutte le specie e credono che la vita sia stata creata, come essa appare ora, da una azione sovrannaturale. Considerano la “macro-evoluzione” (distinta dalla “micro-evoluzione” intraspecifica) come incompatibile con le Sacre Scritture e alcuni addirittura argomentano che si tratta di una minaccia diretta alla Cristianità.</p>

<p>BioLogos non è d’accordo con il punto di vista dei Creazionisti della Terra Giovane. Questa visione infatti rifiuta le scoperte di quasi tutte le discipline della scienza moderna per arrivare alle sue conclusioni e trascura la rivelazione del magnifico lavoro di creazione da parte di Dio, rivelazione che ci viene donata dalla scienza. Noi riteniamo inoltre che il punto di vista degli YECs nasce da una particolare interpretazione della Genesi, che non tiene conto del complesso contesto culturale e teologico nel quale è stata scritta.</p>

<p>I Creazionisti della Terra Vecchia (anche denominati OECs, dall’inglese Old Earth Creationists) accettano che la Terra e l’universo abbiano miliardi di anni di vita, ma ritengono che questa scoperta sia concorde con una interpretazione alla lettera del primo capitolo della Genesi (spesso interpretando i giorni di creazione come lunghi periodi di tempo oppure immaginando lunghi  momenti di pausa tra un giorno della creazione e l’altro). Gli OECs ritengono che la scienza moderna corrisponda strettamente alla narrazione biblica e difendono l’idea che Dio abbia incluso le moderne idee scientifiche nella Bibbia, talvolta attraverso un linguaggio segreto che sarebbe andato perso a causa della audience delle origini. I sostenitori del Creazionismo della Terra Vecchia non accettano la macro-evoluzione ed un comune progenitore per tutte le forme viventi.</p>

<p>BioLogos è in disaccordo con il punto di vista dei Creazionisti della Terra Vecchia. Mentre tale visione da un lato accetta il consenso scientifico riguardo all’idea di una Terra molto antica, dall’altro rigetta i ritrovamenti della genetica moderna, della paleontologia, della biologia dello sviluppo, della biologia dell’evoluzione e di molte altre sotto-discipline biologiche che hanno poco senso se considerate in modo separato dalla macro-evoluzione e dalla teoria del progenitore comune. Inoltre noi crediamo che Dio ha scelto di rivelare se stesso nel contesto della visione del mondo, della cultura e del linguaggio degli autori della Bibbia. </p>

<h3>In che cosa i Cristiani sono d’accordo</h3>

<p>Nonostante queste differenze, tutti i Cristiani sono d’accordo che il Dio della Bibbia è il Creatore del cielo e della Terra. Siamo d’accordo nell’autorità della Bibbia, anche se siamo in disaccordo su quale sia la migliore interpretazione di alcuni passaggi particolari. Siamo d’accordo nel credere che Dio sia continuamente attivo nel suo sovrano governo dell’universo, anche se siamo in disaccordo su quanto Dio agisca attraverso le leggi naturali piuttosto che tramite miracoli. Siamo uniti nel rifiutare l’Evoluzionismo, anche se abbiamo diverse argomentazioni alla base di tale rifiuto (alcuni rigettano la scienza dell’evoluzione, mentre BioLogos rifiuta il velo di ateismo posto sulla scienza). Siamo concordi sui fondamenti della nostra fede: che tutte le persone hanno peccato e che la salvezza viene solo attraverso la morte e resurrezione di Gesù Cristo. Siamo d’accordo nel ritenere che il Dio della nostra salvezza sia lo stesso Dio che vediamo nelle meraviglie della sua creazione. Quando contempliamo la complessità insita nel DNA, la bellezza di un delfino o la vastità della Via Lattea, possiamo unire i nostri cuori in una accorata lode per il divino Artista che tutto ha creato.</p>]]></content:encoded>
        <pubDate>Tue, 16 Oct 12 12:58:27 -0700</pubDate>
        <dc:creator></dc:creator>
        <!--<dc:date>Oct 16, 2012 12:58</dc:date>-->
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        <title>Growing in Faith</title>
        <link>http://biologos.org/blog/growing&#45;in&#45;faith?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/growing&#45;in&#45;faith?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>As he endeavored to learn more, David was intrigued by Francis Collins book The Language of God because Francis did not present evolution as a rival theory to Christian faith, but as something that described God&apos;s method of creation.</description>
        <content:encoded><![CDATA[<br> </br>
<p>Growing up, David believed that Young Earth Creationism was <em>the</em> Christian position on origins and how God created.  As he endeavored to learn more, he was intrigued by Francis Collins book <em>The Language of God</em> because Francis did not present evolution as a rival theory to Christian faith, but as something that described God's method of creation. David studied biblical interpretation and found John Walton's scholarship to be tremendously helpful in understanding the original purpose and intent of the Genesis narrative.</p>

<p>Reflecting on his personal journey, David thinks that it is important that we don't oversimplify questions related to science and faith, but that we explore them deeply in order to understand science in a robust, Christian way. </p>]]></content:encoded>
        <pubDate>Fri, 12 Oct 12 05:00:28 -0700</pubDate>
        <dc:creator>David Buller</dc:creator>
        <!--<dc:date>Oct 12, 2012 05:00</dc:date>-->
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        <title>Series: Decoding ENCODE</title>
        <link>http://biologos.org/blog/series/decoding&#45;encode&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/decoding&#45;encode&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>The BioLogos Foundation explains to the findings of the Encyclopedia of DNA Elements (ENCODE) project and responds to the claims that its discoveries challenge the theory of evolution, especially regarding so&#45;called &quot;junk DNA&quot;.</description>
        <content:encoded><![CDATA[<p>In 2003, under the leadership of BioLogos founder Francis Collins, the Human Genome Project sequenced the full human genome, showing us for the first time the order of the 3.2 billion chemical “bases” that make up the rungs of DNA’s double helix structure. The project identified and mapped 23,000 genes that code for proteins, but those genes make up less than 2% of the total sequence—far fewer than originally predicted, given the complexity of humans. While many non-coding sequences were identified as having function as well, there were still vast swaths of the genome that had no obvious function. In fact, what was known about certain classes of sequences suggested that they had no functional role for humans—such as the sequences identified as either transposons or transposon fragments that make up nearly half of our genome. These sorts of sequences seemed to fit into what was popularly known as the “junk DNA” category. </p>

<p>With the complete genome sequence in hand, we knew the sequence and location of our genes, but what we didn’t know was how all those genes are regulated: how do the trillions of cells in our bodies know when to turn on or off all those genes?  How do the hundreds of distinct cell types develop and function together, when they are all running on the same DNA “operating system?”  </p>
<p>That’s where the ENCODE (short for Encyclopedia of DNA Elements) project comes in. Launched in September 2003, shortly after the announced completion of the Human Genome Project, the goal of the ENCODE project is “to build a comprehensive parts list of functional elements in the human genome, including elements that act at the protein and RNA levels, and regulatory elements that control cells and circumstances in which a gene is active.” In other words, the project seeks to understand how the genome “works.”</p>

<p>Early this month, researchers from ENCODE released more than thirty papers presenting their findings. During a <em>Science</em> magazine <a href="http://news.sciencemag.org/sciencenow/2012/09/live-chat-figuring-out-what-dna.html">online chat</a>, the project’s data coordinator, Ewan Birney, explained the outcome:</p>

<blockquote>The ENCODE project aimed to start our understanding of how the human genome works. We know that (nearly) all the information that determines a human is in the genome, as we all start off as single cell with this DNA. However, we had a patchy understanding of how it works, in particular away from protein coding genes.<br /><br />

To work out how the genome works, we used the fact there are many tiny machines (proteins and RNA - RNA is very like DNA) in each of our cells which know how to "read" parts of the genome. By monitoring where these little molecular machines are on the genome, or how parts of the DNA are copied into RNA (there are quite a few different types of RNA as well), we start to gain some insight into the genome.<br /><br />

We did many such experiments, across different cell types (eg, one cell type was very similar to a liver cell type; another was very similar to a white blood cell). This way not only can we see what is similar, we can also see differences between these cell types.<br /><br />

There is a lot more to get to know and understand here - this is definitely closer to the start than the end. But it is a substantial amount of data, and analysis, to start on this journey.</blockquote>

<p>According to the abstract of one of the <a href="http://www.nature.com/nature/journal/v489/n7414/full/nature11247.html">lead papers</a> from <em>Nature</em>, this extraordinary glut of data “enabled us to assign biochemical functions for 80% of the genome, in particular outside of the well-studied protein-coding regions.”  Only 2% of the genome codes for proteins, but 80% or more has <em>some</em> biochemical function.  As a <em>Science</em> <a href="http://www.sciencemag.org/content/337/6099/1159">news article</a> put it, these 30 papers “sound the death knell for the idea that our DNA is mostly littered with useless bases.”</p>

<p>The pro-Intelligent Design organization The Discovery Institute has heralded the discovery as the “demise of junk DNA.”  Casey Luskin writes for their <a href="http://www.evolutionnews.org/2012/09/junk_no_more_en_1064001.html">blog</a> <em>Evolution News</em>:</p>

<blockquote>Let's simply observe that it provides a stunning vindication of the prediction of intelligent design that the genome will turn out to have mass functionality for so-called "junk" DNA. ENCODE researchers use words like "surprising" or "unprecedented." They talk about of how "human DNA is a lot more active than we expected." But under an intelligent design paradigm, none of this is surprising. In fact, it is exactly what ID predicted.</blockquote>

<p>The extent to which the ENCODE project been able to identify function has been surprising—even exhilarating—though scientists have for some time been getting glimpses of the many ways in which segments of DNA can be “active.”  Even in 1970 biologists knew that some non-coding DNA had function, and by 2003 there was a large body of work demonstrating that many non-coding elements acted as promoters, enhancers, insulators, and so on. Indeed, in recent years many have come to appreciate the fact that “junk” was never really an appropriate metaphor in the first place.   Still, because sequencing of multiple genomes has shed such extraordinary light on key evolutionary mechanisms, many geneticists have focused on function primarily in terms of which regions do or do not contribute to the evolutionary fitness of their host, rather than whether they were merely "doing something" biochemically.  What the impressive ENCODE project has done is open a treasure trove of new information that can only accelerate the pace at which researchers are able to explore the incredible subtlety and complexity of DNA, and refine the very concept of “functionality.” </p>

<p>So with all this in mind, is ENCODE a stunning victory for ID, as Luskin believes? Bryan College biologist Todd Wood thinks not.  He <a href="http://toddcwood.blogspot.co.uk/2012/09/everyones-excited-about-encode.html">writes</a>, “I don't think that function equates to design, nor do I think that design requires or predicts function.  They're not the same thing… my understanding of function does not require me to hypothesize God (or an anonymous designer, if you must) as the proximal cause.”  </p>

<p>We agree.  Indeed we would go on to say that evolution and design are not mutually exclusive.  So while finding function is not sufficient to prove design, recognizing that function has arisen by way of evolution does not indicate that God was not at work.  We at BioLogos believe God providentially works out his purposes—his designs—<em>through</em> the elegant processes of evolution, not in opposition to them.</p>

<p>Amazing as the new data are, it only strengthens and enhances our evidence for evolution.  While much of the genome is “doing something” biochemically, it is still likely that the majority of the sequence is evolutionarily neutral (Senior Fellow Dennis Venema discusses the evidence for this “neutrality” in a <a href="http://biologos.org/blog/understanding-evolution-is-there-junk-in-your-genome-part-1">post</a> on our site, including a striking comparison between 29 different mammal genomes and the human genome).  In fact, another  ENCODE researcher participating in the <em>Science</em> magazine chat, John A. Stamatoyannopoulos of the University of Washington School of Medicine, thinks the findings align beautifully with evolutionary theory:
</p>

<blockquote>ENCODE's data provide a unique and powerful window through which to view evolutionary change. We can see those changes directly by lining up the genome sequences of many different organisms -- these line-ups have revealed millions of regions where all the genomes agree, indicating sequences that have been specially preserved by evolution while others have decayed away (ie freely changed their letter codes). We now see that a large proportion of these 'conserved' regions are lighted up by ENCODE annotations, indicating that they are marking spots in the genome that contain important instructions for cell function.</blockquote>

<p>We’ve discussed “junk” DNA previously, including a multi-part series by Dennis Venema, and we’ve received many emails over the past few days asking for our comments on the ENCODE findings. On Monday and Tuesday, Dr. Venema will begin to offer his own thoughts on ENCODE.</p>

<p class="intro">A special thanks goes to Darrel Falk, Mark Sprinkle, Kathryn Applegate, Dennis Venema, and Tom Burnett for their contributions to this post.</p>]]></content:encoded>
        <pubDate>Wed, 26 Sep 12 05:00:35 -0700</pubDate>
        <dc:creator>Stephen Mapes, Dennis Venema</dc:creator>
        <!--<dc:date>Sep 26, 2012 05:00</dc:date>-->
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        <title>Conversations in Creation</title>
        <link>http://biologos.org/blog/conversations&#45;in&#45;creation?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/conversations&#45;in&#45;creation?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>Since the BioLogos/Highway Media collaboration From the Dust made its worldwide debut this year, we’ve been excited to hear how others have been using the film to jump start their own conversations with fellow Christians about science and faith .</description>
        <content:encoded><![CDATA[<p>From <a href="http://www.patheos.com/blogs/jesuscreed/2012/06/12/conversations-in-creation-rjs/"><em>Jesus Creed</em></a>:</p>

<blockquote>“The subtitle of <em>From the Dust</em> is “conversations in creation” and this subtitle reflects the primary purpose of the film. The aim is to start a conversation and to open minds to the issues involved in the questions of evolution and creation, but to do so in a fair fashion. I don’t mean that the film takes no position on the issue – the film clearly intends to make a case for evolutionary creation as consistent with the Christian faith, and in fact as the preferred option. But it does so without misrepresenting or vilifying those holding alternative views. […]<br /><br />

I think the film will work best when followed by open discussion over several sessions, preferably led by Christians with expertise in science and  theology. This is something I hope to be able to do as opportunities present themselves, but there are many scholars and teachers around the country capable of leading the discussion.”</blockquote>

<p>From <a href="http://www.testoffaith.com/resources/resource.aspx?id=696"><em>Test of Faith</em></a>:</p>

<blockquote>“This beautifully produced documentary navigates the difficult ground of the creation-evolution debate graciously, honestly and with rigour. […]<br /><br />
The message of <em>From the Dust</em> is that it is possible to be a sincere Bible-believing Christian and accept what we know through science, particularly evolutionary biology. The approach used is to show both sides of the argument, interviewing representatives of different points of view, before coming down firmly on the part of theologians and scientists who see no clash between faith and evolution. In this feature-length documentary, Pettey and his collaborators have combined authoritative interviews with scholars, pastors and teachers with creative visuals and music to produce something that is eminently watchable and should promote helpful discussion among many, both in and outside of the church.”</blockquote>

<p><em>From the Dust</em> is <a href="http://www.highwaymedia.org/From-the-Dust-P1985.aspx">available now</a> from Highway Media. DVD copies are $20 and Blu Ray copies are $25. Beginning in October, <em>From the Dust</em> will also be a free gift for tax-deductible donations of $50 or more to The BioLogos Foundation.</p>]]></content:encoded>
        <pubDate>Fri, 14 Sep 12 05:00:53 -0700</pubDate>
        <dc:creator></dc:creator>
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        <title>Using Film to Catalyze Conversations on Faith and Science</title>
        <link>http://biologos.org/blog/using&#45;film&#45;to&#45;catalyze&#45;conversations&#45;on&#45;faith&#45;and&#45;science?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/using&#45;film&#45;to&#45;catalyze&#45;conversations&#45;on&#45;faith&#45;and&#45;science?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>What are the best ways to spark productive conversations about science and faith? Certainly there are books, articles, blogs (like this one), and podcasts. But there are particular advantages to using film.</description>
        <content:encoded><![CDATA[<p>Like many other Christians who are scientists, I hope for healthy and robust conversations about science and Christian faith. How can we inform and stimulate such conversations on campuses among students, faculty and staff, or at our churches? These are essentially cross-cultural interactions, and often do not come easily. Yet there is much to be gained by crossing the barriers erected at the science-faith interface. </p>

<p>What are the best ways to spark productive conversations about science and faith? Certainly there are books, articles, blogs (like this one), and podcasts. Or we can host major events with a prominent speaker or panel. These are all good things, to be sure. But there are particular advantages to using film. Unlike books, articles, blogs, or podcasts, videos engage with both sight and sound. A single DVD is much less expensive than a dozen copies of a book for a group to read through together. A film is portable, flexible, quick, and easy to use. Participants don't need to prepare between sessions, nor do they require internet access. And you don't need to find a big-name speaker or organize a large-scale event.</p>

<h3>Test of Faith</h3><br>

<p class="caption-center"><iframe width="560" height="315" src="http://www.youtube.com/embed/vO1wcYKe99Q" frameborder="0" allowfullscreen></iframe></p><br>

<p>Unlike years ago, there are now high-quality and stimulating science-faith documentaries that are well-suited for engaging groups and stimulating conversations. The Faraday Institute for Science and Religion, based in Cambridge, UK, has put together an award-winning documentary, <em><strong>Test of Faith: Does Science Threaten Belief in God?</strong></em> This 2009 film is divided into three distinct 30-minute sessions, which can be further divided if desired. A wide range of topics are considered, including the age and origin of the universe, the possibility of other universes, evolution, care for the environment, the brain, free will, and bioethics. The trailer can be seen above. This film is a good choice if you are not looking to focus primarily on issues around biological evolution. It is also particularly well-suited for groups that include both skeptics and Christians, as one could imagine it being shown on a public television station such as PBS or BBC. Faraday now has quite a range of supporting materials around the film, including bonus footage, a rich website, a leader’s guide, a study guide for participants, and a book with autobiographical contributions from scientist-believers, <em>Test of Faith: Spiritual Journeys with Scientists</em>. Contributors to the film and book include Francis Collins, Alister McGrath, Ard Louis, Jennifer Wiseman, Bill Newsome, John Polkinghorne, Alasdair Coles, Rosalind Picard, and John Bryant.</p>

<h3>From the Dust</h3><br>

<p class="caption-center"><iframe src="http://player.vimeo.com/video/23533521?title=0&amp;byline=0&amp;portrait=0" width="570" height="321" frameborder="0" webkitAllowFullScreen mozallowfullscreen allowFullScreen></iframe></p>

<p>Just this year, BioLogos partnered with Highway Media to produce a new documentary, <strong><em>From the Dust: Conversations in Creation</em></strong>. This film is just over an hour long, and is divided into four sections of similar length: “Faith and Science,” “Divinely Inspired,” “The Conversation,” and “Truly Human.” Some early clips from the film (prior to the final round of editing) and additional footage can be found in the <a href="http://biologos.org/resources/multimedia" (target="_blank") >multimedia resources</a> section of the BioLogos website, and the trailer is above. <em>From the Dust</em> has a firm focus on Genesis, creation, and evolution, probably the area of the most significant tension in our society today related to science and faith. Unlike <em>Test of Faith</em>, there is no narrative voice in From the Dust, and contrasting views are held in tension. It also focuses on theology more than science, so <em>From the Dust</em> may be a better choice than <em>Test of Faith</em> for some groups of Christians. While the <em>Test of Faith</em> film has a very modern and logical structure to it, <em>From the Dust</em> has more of a personal and emotional feel, and you feel that the people in the film are talking <em>with</em> you more than just talking <em>to</em> you. You see the cost that divisive positions on creation and evolution can have on Christians, even in the college classroom. While the film has a strong leaning towards evolutionary creationism and features N. T. Wright, John Walton, John Polkinghorne, Alister McGrath, Peter Enns, Jeff Schloss and Rick Colling, there are also significant contrasting voices from Answers in Genesis and Canopy Ministries. In my opinion, <em>From the Dust</em> is a good choice for many churches, small group Bible studies, or Christian student groups (e.g., InterVarsity, Navigators) to use. There are fewer supporting materials around <em>From the Dust</em>, due both to its new release and also its more inductive approach than that of the Faraday project. In addition to bonus footage, there is a <a href="http://fromthedustmovie.org/">website</a>, a list of sample discussion questions, and a <a href="http://biologos.org/uploads/static-content/From-the-Dust-Study-Guide.pdf" >group study guide</a> that I developed.</p>

<h3>Next Steps</h3>

<p>As you decide which film to use for starting conversations and how to use it, there are several things to consider. Will you show the whole film at once, or will you spread it out over several sessions? Will you provide additional structure or just have an open discussion after each viewing? How many days do you have available? How much time at each session? What are the worldviews of your audience? What is their level of biblical, theological, and scientific knowledge? How big is the group, and what is their age? What is their willingness to do homework and their level of interest in the topic? Is this a new group specifically convened to explore science and faith issues together, or is this a preexisting group that has been doing other things together and has varying levels of commitment to this new topic? What sort of expertise does the leader of the group have, or are there multiple leaders? All of these can affect the group dynamic and may influence the choices you make.</p>

<p>The groups I have worked with have been Christian students from secular colleges, Christian faculty and staff from secular colleges, a small group Bible study, and a general audience. I have found that <em>Test of Faith</em> worked well over three weeks with my Bible study group and with the faculty and staff group, though in these exclusively Christian groups I needed to add a bit of scripture, song or prayer in those settings (as is also recommended in the Faraday materials). The film was particularly good for a 30-minute screening at the general audience event, which also featured a panel for Q&A afterwards. It could likely be used in a college classroom, too, even at a secular institution. I had been considering strategies for using <em>Test of Faith</em> at my church as well, until I found <em>From the Dust</em>.</p>

<p>As I began thinking about ways to use <em>From the Dust</em> while it was still in the final editing stages, I screened it in two parts to three of the four audiences mentioned above (not the general audience). I asked several dozen undergraduates from local InterVarsity groups to give me their responses to the film and to tell me what questions it makes them want to explore more. I did the same with the Christian faculty and staff, and with my home Bible study group. Then I assembled a six-week curriculum (plus an opening session on setting expectations and sharing my vision), primarily aimed at Christian undergraduates. My students this summer loved it so much that we followed it with three-weeks on <em>Test of Faith</em>! Now I keep getting asked when I’ll do it next. But I am hoping that others, even my own students, will want to lead discussion groups like this. You don’t have to be an expert to start a conversation, and sometimes being a leader is the best way to learn.</p><br> </br>]]></content:encoded>
        <pubDate>Thu, 13 Sep 12 06:31:09 -0700</pubDate>
        <dc:creator>David Vosburg</dc:creator>
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        <title>Series: Science and the Bible: Theistic Evolution</title>
        <link>http://biologos.org/blog/series/science&#45;and&#45;the&#45;bible&#45;theistic&#45;evolution&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</link>
        <guid>http://biologos.org/blog/series/science&#45;and&#45;the&#45;bible&#45;theistic&#45;evolution&#45;series?utm_source=RSS_Feed&amp;utm_medium=RSS&amp;utm_campaign=RSS_Syndication</guid>
        <description>In this series, Ted Davis identifies the history, core tenets and assumptions about the theistic evolution view.</description>
        <content:encoded><![CDATA[<p>The dictionaries I checked don’t define the term, “theistic evolution,” so I offer my own definition: the belief that God used the process of evolution to create living things, including humans. Some might find this a vague definition, since (for example) it doesn’t include the adjective “Darwinian” before “evolution,” but that would eliminate most of the people prior to World War Two who would otherwise fit the definition. On the other hand, if we left out a specific reference to human evolution, then the category would be even larger, since a number of important Christian writers have accepted evolution among the “lower animals,” while explicitly rejecting it for human beings. We could argue endlessly about such things, and not pointlessly; my point here is simply to be clear about terminology.</p>

<p>“Theistic evolution” has been discussed by that name since at least 1877, and one of the first to do so was the great Canadian geologist John W. Dawson, in his book, <em>The Origin of the World, According to Revelation and Science</em> (1877). In the midst of a lengthy discussion of the animals created on the fifth day of creation, he says:</p>

<blockquote>The long time employed in the introduction of the lower animals, the use of the terms “make,” and “form,” instead of “create,” and the expression “let the waters bring forth,” may well be understood as countenancing some form of mediate creation, or of “creation by law,” or “<strong>theistic evolution,</strong>” as it has been termed; but they give no countenance to the idea either of the spontaneous evolution of living beings under the influence of merely physical causes and without creative intervention, or of the transmutation [evolution] of one kind of animal into another.  (p. 225)</blockquote>

<p>As the final part of this sentence implies, Dawson was (ironically) a staunch opponent of both human evolution and the common ancestry of other animals; in short, by no reasonable definition was he a theistic evolutionist, even though he thought that a great deal of change had taken place naturally, “within certain limits” that he associated with the created “kinds” spoken of in Genesis. Indeed, references to “theistic evolution” are probably no less common among opponents of the view (including William Jennings Bryan in the 1920s) than among proponents, but I won’t attempt to enumerate further examples.</p>

<p>In recent years, however, some proponents of TE have endorsed alternative labels for their position(s). The most prominent example is Francis Collins, the geneticist who started BioLogos. Collins uses the term “BioLogos” itself as the label for his <a href="http://biologos.org/questions/biologos-id-creationism">overall position</a>, which fits well within my TE category. The evangelical theologian <a href="http://www.ualberta.ca/~dlamoure/">Denis Lamoureux</a>, one of the most qualified of all writers on this topic (he has earned doctorates in both theology and biology), strongly prefers the term, “Evolutionary Creation” (EC), precisely because he thinks the noun “creation” ought to have more emphasis than the adjective “evolutionary,” something that the term “theistic evolution” does not accomplish. I recommend <a href="http://biologos.org/resources/books/evolutionary-creation">his book of that title</a> to anyone who wants an authoritative analysis of both biblical and scientific aspects of the origins controversy. The main ideas are clearly presented in his <a href="http://www.ualberta.ca/~dlamoure/web_lectures.htm">web lectures</a>. Another highly qualified proponent of TE, George Murphy, also has reservations about the term, but he recognizes its wide recognition and agrees with <a href="http://www.theologyweb.com/campus/showthread.php?29480-Deep-Theistic-Evolution">the idea itself</a>, that “Evolution is God’s way of creating”. I will have more to say about Murphy, a very important voice, in a subsequent post.</p>

<p>Despite these quite reasonable objections to the term, I continue to use the “TE” term, partly because it has historical continuity and I’m an historian, and partly because it’s easily recognized. If anyone wants to object, however, they won’t get objections from me, unless their own reasons aren’t reasonable. My only request: define your terms as clearly as I’ve defined mine.</p>

<p>Because the term is broad and a bit hazy, more should be said about it. When we talk about “Intelligent Design” next month, I’ll tell you that it’s a “big tent” (something proponents of that view also say), insofar as it glosses over the biblical and theological issues that have usually separated Christians into various “camps” (such as the various positions we are now studying) when it comes to origins. TE is also a “big tent,” in that adherents differ strongly amongst themselves on theological and biblical issues. Unlike ID, however, theology is openly discussed—and competing theologies of God, nature, and humanity are openly advocated, not left implicit. We’ll say more about this next time. This column presents one type of TE, a type favored by many evangelical scientists and scholars. For example, the people I will discuss all accept (as far as I can tell) the Incarnation and Resurrection—that is, they are Trinitarian Christians who believe that Jesus was fully divine (and fully human) and that the disciples went to the right tomb, only to find it empty, before encountering the risen Christ in diverse places. They also believe in <em>creation ex nihilo</em>, the classical view (illustrated at the start of this column) that God brought the universe into existence out of nothing. There are other types of TE, some of which are not (in my opinion) sufficiently biblical, or even sufficiently Christian, to be part of this series. Please keep that in mind as we proceed: don’t tar all TEs with the same brush—something that happens all too often elsewhere. Let knowledge, not ignorance, be our guide. </p>

<h3>Core Tenets or Assumptions of Theistic Evolution</h3>
<p style="margin: 0 0 0 20px;">(1) The Bible is <em><strong>NOT</strong></em> a reliable source of scientific knowledge about the origin of the earth and the universe, including living things—because it was never intended to teach us about science.</p>
<p>This reflects not only modern scientific knowledge, but also (more importantly) modern biblical scholarship. Peter Enns and some other evangelical scholars have recently stressed this point, initiating a firestorm in the evangelical academic community that, so far, has confirmed my view that evangelicals in general are just not ready to <a href="http://erb.kingdomnow.org/the-evolution-of-adam-peter-enns-feature-review/">deal with this</a>, even though it is consistent with the classical notion of accommodation. My own comments about the magnitude of the problem, written before the firestorm started, can be found <a href="http://evanevodialogue.blogspot.com/2008/06/evangelicals-evolution-and-academics.html">here</a>.</p>

<p style="margin: 0 0 0 20px;">(2) The Bible <em><strong>IS</strong></em> a reliable source of knowledge about God and spiritual things.</p>
<p>Remember the quip that Galileo attributed to Cesare, Cardinal Baronio, “The intention of the Holy Ghost is to teach us how one goes to heaven, not how heaven goes.” (We discussed this earlier in <a href="http://biologos.org/blog/galileo-and-other-good-books-about-science-and-the-bible">the series</a>). Evolution was not an issue in Galileo’s day, but this platitude is frequently quoted by advocates of TE—and often without proper attribution to Baronio. Commonality obviously lies in the attitude, not the topic. Many critics of TE are willing to adopt Galileo’s approach when it comes to the Solar System, but not when it comes to evolution: they are anxious to <a href="http://biologos.org/blog/galileo-and-the-garden-of-eden-part-2">keep Galileo out of the garden of Eden</a>.</p>
 
<p class="caption-right"><img src="http://biologos.org/uploads/static-content/ted_ted_second.jpg" alt="" height="349" width="270"  /><br />
Portrait of Cesare, Cardinal Baronio,<br />attributed to Caravaggio (1602-3) (<a href="http://caravaggio.com/preview/images/250/I000432.jpg">Source</a>)</p>

<p style="margin: 0 0 0 20px;">(3) Scientific evidence is <em><strong>irrelevant</strong></em> to the Bible—it is simply not a science book.</p>
<p>See above. This needs to be stated separately, since some believers look to science for “proof” of the Bible, just as some unbelievers look to science for “disproof.” Proponents of TE stress that science and the Bible aren’t like apples and oranges; rather, they are more like apples and rocks: you can hold one in each hand without tension, but they have very little in common. We wouldn’t look for God in the phone book, or in an automobile repair manual. Don’t look for science in the Bible. In principle, scientific theories neither support nor threaten the Bible.</p>

<p style="margin: 0 0 0 20px;">(4) The creation story in Genesis 1 is a confession of faith in the true creator, intended to refute pantheism and polytheism, not to tell us how God actually created the world. </p>

<p>This is meant to echo what we said about the <a href="http://biologos.org/blog/science-and-the-bible-the-framework-view">Framework View</a>. It is not necessarily true that all TEs accept the Framework View or something like it, but many do. Most would probably say that the Bible is not contradicted by any specific scientific theory of biological diversity—unless that theory oversteps its philosophical boundaries and functions as a kind of religion, what Conrad Hyers called <a href="http://www.asa3.org/ASA/PSCF/1984/JASA9-84Hyers.html">“dinosaur religion.”</a></p>

<p style="margin: 0 0 0 20px;">(5) The Bible tells us <em><strong>THAT</strong></em> God created, not how God created</p>

<p>Again, this sounds like the Framework View—or, at least, it should. Belief in God the creator is consistent with science, and even supported by some aspects of science; but, it is not a <strong>substitute for</strong> scientific explanations. </p>

<h3>An Assignment: It’s Your Turn to Read and Write</h3>
<p>Astronomer Owen Gingerich has written an eloquent little TE book, <em><a href="http://biologos.org/resources/books/gods-universe">God’s Universe</a></em>. A number of quotations have been compiled <a href="http://www.alisonmorgan.co.uk/Gingerich%2006.pdf">here</a>. My <a href="http://www.firstthings.com/article/2007/04/300-all-things-bright-and-beautiful-36">review</a> for <em>First Things</em> identifies some of the key theological and philosophical issues related to TE. Please follow these links, study what you find, and offer comments below. If anyone has actually read the book itself, your views would be particularly valuable to include.</p>

<h3>Looking Ahead</h3>
<p>In our next column in two weeks, we continue our discussion of Theistic Evolution, focusing on some crucial theological aspects of TE. In the meantime, please do the “assignment” and get back to us. </p>
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        <pubDate>Tue, 11 Sep 12 05:00:06 -0700</pubDate>
        <dc:creator>Ted Davis</dc:creator>
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